Solenopsis invicta (red fire ant): 105193452
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Entry
105193452 CDS
T03916
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03022
Basal transcription factors
soc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105193452
09124 Replication and repair
03420 Nucleotide excision repair
105193452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105193452
03400 DNA repair and recombination proteins [BR:
soc03400
]
105193452
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105193452
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105193452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-UDP
zf-C3HC4
zf-RING_2
zf-P11
zf-C3HC4_2
TRAF3_RING
zf-RING_4
zf-RING_6
FdhD-NarQ
Motif
Other DBs
NCBI-GeneID:
105193452
NCBI-ProteinID:
XP_011156201
LinkDB
All DBs
Position
9:complement(13302487..13304523)
Genome browser
AA seq
323 aa
AA seq
DB search
MDDQACPRCKTTKYRNPSLKMMVNVCGHTLCESCVDLLFLKGSGSCPECKIPLRRTNFRV
QMFEDSMVEKEVNIRKRILRDFNKKEEDFSTLREYNDYLEEIETIIYNLANNIDVVETNK
KIEQYKKDNKEQIAKSKSKLGRNEYELEEMIEMEKQKEEERRIELAKEEVEAKRRKIREK
EALIDELTFSDTNAKNIVESFASAIQTQKKEAKAASSSTVRATQFSTGIKFGNQGNQNYL
SVPKIEEGPLYTYTPIRQQVEGPTPPSWRELQGRGYVTHIRNECKSERAGGFRAHVACLR
ALQEAMAGLYHNPSQRQAEFAPV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcaagcgtgcccacggtgtaaaaccaccaaataccgaaatccatcgttgaag
atgatggtgaacgtctgcggtcacacgttatgcgagagctgcgtggatctgctcttttta
aaaggctccggatcctgtccagaatgcaagattccactgagaagaacaaacttcagagtt
caaatgttcgaggattctatggtcgagaaggaagtgaatataaggaaacgtattttacga
gattttaataaaaaggaagaagacttttccacgttaagagaatataatgattatttagag
gaaattgagactataatatataacctggccaataatatcgatgtagttgaaacaaacaag
aagatagagcagtataaaaaggataacaaagaacaaatagcaaaaagtaagtctaagctt
ggcagaaatgagtacgagctagaggagatgatagaaatggagaagcagaaagaagaggaa
aggagaatagaacttgcgaaggaagaggttgaagcaaagaggaggaaaattcgtgagaag
gaagctcttatcgacgagttaacgttctctgatacgaatgccaaaaatatcgttgaatca
ttcgcctccgcgatacagacgcagaagaaggaagcaaaagctgcctcatcgtccaccgtt
agagcaactcagtttagtacaggaattaaatttggtaatcagggaaatcagaattacttg
tcagtgccaaagatagaagaggggcctctctacacttacacgcccattcggcagcaggta
gaaggcccgacaccgcccagctggcgagagcttcaaggacgtggatatgttacgcatata
cgtaacgaatgtaagagtgagagagcaggaggatttagagcgcacgtcgcatgcttacga
gcattgcaggaagcgatggccggtttgtaccacaatccttcgcaacgacaagctgaattt
gcacctgtatga
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