KEGG   Solenopsis invicta (red fire ant): 105193653
Entry
105193653         CDS       T03916                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U isoform X1
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
soc  Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:soc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:soc03041]
    105193653
   03400 DNA repair and recombination proteins [BR:soc03400]
    105193653
Spliceosome [BR:soc03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    105193653
DNA repair and recombination proteins [BR:soc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     105193653
SSDB
Motif
Pfam: AAA_33 SPRY SAP HeH AAA_18
Other DBs
NCBI-GeneID: 105193653
NCBI-ProteinID: XP_011156491
LinkDB
Position
2:complement(10551131..10558053)
AA seq 1035 aa
MMDPSKLKVVELRAALSERGLDTKGNKPVLVERLRKALEEETQEEYGSVLHAENIDDTAL
KETQERMIETMRLSQSPRTPSRASRSAPTTTPTKISTRNASRTSTTPNSSKQSTPSKSQY
DEEQLVMQQEEMSKLSPEKCREEPKDDASCVVQDKMYLSVSEKYEEEEAKHVNILEGNKY
RANILQVPATEPSEKLSTIAHVDQFSIIQEDCEAKRSNIDEDGKVQQLIVETKATTKLEE
KTEIKDADIGKIQDTFERNIQDKVSIEKENVKRAEDKYNIKDNIDIPEVKQPTHTMPDQV
DKTCDTELKQEEKIIHDDYTVQDKKMDISVNIKNLDEKLDNTDISQDKDTIAENYFLKQK
ATLDAEEPNQMESNDRKRKRSPSPGEVHHPSPVLPKAEDEPDLDESAVILSWYDSDLNLV
IDKNGFLSATPMHNGDLCDMWAGARASHGVLNGKVYYEAKITQHCPTVTKDEKHLHMLRI
GWSVPSASMQLGEEKLSYAYTSAGQQGTDRKFTDYGFPFGKDDVVGCYLDMTPENTVELF
YTVNGENVGSAFSVSKDELGDRPLFPHILSKNCTFVCNFGQEEPWCERVPGYVLVGNIES
EDTVAGPRRPDGKADCEVIMMCGLPAAGKTTWAMKHASNHPDKLYNILALHNLIEKTGDI
ALSDQEQNTCQRDIIIGRCTRALDQLINVAGGRRRNYILDQKSNIYSSVQRRKMRNFCGY
QRKAIIVLPTNEEYNQRLSTHNAIEGKVSESKLMEMKANFTAPLAGESFDTVEWIGLDEE
EGKKLIEKYNKEGKDAGFSQQSAAKRPRLDKTEGNKETRDSRNNRDTRDRRNNYQDRGRN
PSWRGANMGGWRGERPQRGGYMRHTGGYGPPVPWRLRGRGGPAMVRGGTDRRMGGVDRRP
GNDRNRSVAPRQGGWGSMSGSYQGSQQSSWGQQDNWSGSQTQGNWNQQSGWGQQQWGGGW
KGYGQGTYGQAGYNQHGYGNGNWNSWNQQYYNNQYWGQQQQSGQTTAAGGQAEFTSDMVA
TTSTNAGTGYSYSQG
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgatggatccgtctaaattgaaagtggtggagttgcgagccgcgctgagcgagcgcggc
ctcgacaccaagggcaacaagccagtgctcgtcgagcggctacgcaaagctctggaggaa
gagactcaggaggagtatggttcagttttgcacgcagaaaatattgatgatacagctttg
aaagaaacacaagagagaatgattgaaactatgcgattgtcacaatcaccgagaacacct
agtagagcatctaggagtgccccgacgacgactccgacaaaaatttctaccagaaatgca
tcaagaacatctacaactccaaattcttctaagcagtctactccaagcaaatctcaatat
gacgaagaacaacttgtaatgcaacaagaggaaatgtcaaaattgtcccctgaaaagtgt
agggaagagccaaaagatgatgcatcttgtgttgttcaggataaaatgtatttgtcggta
tctgaaaaatatgaggaagaagaggcaaagcatgttaatattttagaaggtaataagtat
cgagcgaatattcttcaagtacctgcgacagaaccgtctgaaaaacttagtacaattgca
cacgtagatcaattttctataattcaagaagattgtgaagcaaaaagatctaatatagat
gaagatggcaaagttcaacagttaattgtggaaacaaaagctactacaaaattggaagaa
aaaactgagattaaggatgcagatattggtaaaatacaagatacttttgagagaaacatt
caagataaagtttcaattgagaaggaaaatgttaaacgtgcagaggataaatataacatt
aaggacaatatagacattccggaagttaaacaaccaacacatacgatgcctgatcaggta
gataaaacgtgtgatactgaattaaagcaggaagaaaagattattcatgatgattataca
gtgcaagataaaaaaatggacatttcagttaatataaaaaatttagatgaaaaactcgat
aatactgatatttcacaagataaggatacaatagccgaaaattatttcttgaagcaaaaa
gccacattagatgcggaagaaccaaatcaaatggaaagcaatgacaggaaaagaaaaaga
tctcctagcccaggggaagttcatcacccatctcctgtgttaccaaaagcggaggatgaa
ccagatcttgatgaatcagctgtaattttatcatggtatgattcagatttgaatttagtt
attgataaaaatggatttctctctgctacacctatgcacaatggtgatctctgtgatatg
tgggctggtgcaagagcatctcatggtgtcttaaatggaaaagtctattacgaagctaaa
attacgcaacactgtcctactgtcacaaaagacgaaaaacacttgcatatgcttagaatt
ggttggtcagtaccctctgcgtctatgcaacttggtgaggaaaaattgagttatgcatat
acgagcgctgggcagcagggtactgacaggaagtttacggactacggtttcccatttggc
aaggacgacgttgtgggatgttatcttgacatgacgcctgaaaatactgtagaactgttt
tatacagtaaatggcgagaatgttggatctgcatttagtgtttccaaggatgagcttggc
gatagaccattatttccgcatattctgagtaaaaattgtacgtttgtctgtaattttggt
caagaggagccatggtgcgagcgagttccaggatatgtcttagtgggtaacattgaatcc
gaggacacagtcgcagggccgcgtagaccagatgggaaggcggattgcgaagtgataatg
atgtgcggtttacccgcggcaggaaaaactacctgggcaatgaagcatgcgtctaatcat
cctgataaattatataatattttagcgctccacaacttgattgagaaaactggagatatt
gctctgtcagatcaagagcaaaacacctgtcaacgagatattattattggtagatgtact
cgcgcactcgaccaactaatcaatgtggcaggtggcagaagacgtaactatatattagat
cagaaaagcaacatatattcttccgtacaaagacgtaaaatgcggaatttctgcggatat
cagagaaaagcgattattgttttaccaacaaacgaggaatataatcaacggttgtccacg
cataatgcaatcgaaggaaaagtttccgagtctaaacttatggaaatgaaagcaaatttc
actgcacctttggcgggggaatctttcgatacagtggagtggatcggtcttgacgaggaa
gaaggcaagaagctcattgagaaatataacaaggaaggtaaagatgctggattcagtcag
caatcggcagcaaaacgaccacgtcttgacaagactgagggtaacaaagagacgcgtgat
tcgcggaacaatcgagacactcgagatcgaagaaataattatcaagatagaggtcgcaat
ccttcttggcgcggcgccaatatgggaggttggagaggagaaagaccgcaaagaggtggt
tacatgaggcacactgggggctatggacctcccgtcccatggagactacgaggacgagga
ggacctgcgatggtacgaggaggaacagacagaagaatgggtggagtagataggagacct
ggaaatgacagaaatcgatctgttgcgcctaggcaaggtggttggggttccatgagtgga
agttatcaaggatcacagcagtccagttggggtcaacaggacaattggtcaggtagccag
acccaaggaaattggaatcaacaaagtggctggggacaacaacagtggggtggcgggtgg
aagggatatggccaaggcacatacggtcaggcgggatacaatcaacatggatacggcaat
ggtaattggaatagctggaatcaacagtattacaacaaccagtattggggtcagcaacaa
cagagtggacaaactactgcagctggcggccaagctgagtttacaagcgacatggttgca
acgacatctaccaatgcgggaacaggatatagttactcgcagggataa

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