Solenopsis invicta (red fire ant): 105193653
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Entry
105193653 CDS
T03916
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U isoform X1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soc03041
]
105193653
03400 DNA repair and recombination proteins [BR:
soc03400
]
105193653
Spliceosome [BR:
soc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
105193653
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105193653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
HeH
AAA_18
Motif
Other DBs
NCBI-GeneID:
105193653
NCBI-ProteinID:
XP_011156491
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All DBs
Position
2:complement(10551131..10558053)
Genome browser
AA seq
1035 aa
AA seq
DB search
MMDPSKLKVVELRAALSERGLDTKGNKPVLVERLRKALEEETQEEYGSVLHAENIDDTAL
KETQERMIETMRLSQSPRTPSRASRSAPTTTPTKISTRNASRTSTTPNSSKQSTPSKSQY
DEEQLVMQQEEMSKLSPEKCREEPKDDASCVVQDKMYLSVSEKYEEEEAKHVNILEGNKY
RANILQVPATEPSEKLSTIAHVDQFSIIQEDCEAKRSNIDEDGKVQQLIVETKATTKLEE
KTEIKDADIGKIQDTFERNIQDKVSIEKENVKRAEDKYNIKDNIDIPEVKQPTHTMPDQV
DKTCDTELKQEEKIIHDDYTVQDKKMDISVNIKNLDEKLDNTDISQDKDTIAENYFLKQK
ATLDAEEPNQMESNDRKRKRSPSPGEVHHPSPVLPKAEDEPDLDESAVILSWYDSDLNLV
IDKNGFLSATPMHNGDLCDMWAGARASHGVLNGKVYYEAKITQHCPTVTKDEKHLHMLRI
GWSVPSASMQLGEEKLSYAYTSAGQQGTDRKFTDYGFPFGKDDVVGCYLDMTPENTVELF
YTVNGENVGSAFSVSKDELGDRPLFPHILSKNCTFVCNFGQEEPWCERVPGYVLVGNIES
EDTVAGPRRPDGKADCEVIMMCGLPAAGKTTWAMKHASNHPDKLYNILALHNLIEKTGDI
ALSDQEQNTCQRDIIIGRCTRALDQLINVAGGRRRNYILDQKSNIYSSVQRRKMRNFCGY
QRKAIIVLPTNEEYNQRLSTHNAIEGKVSESKLMEMKANFTAPLAGESFDTVEWIGLDEE
EGKKLIEKYNKEGKDAGFSQQSAAKRPRLDKTEGNKETRDSRNNRDTRDRRNNYQDRGRN
PSWRGANMGGWRGERPQRGGYMRHTGGYGPPVPWRLRGRGGPAMVRGGTDRRMGGVDRRP
GNDRNRSVAPRQGGWGSMSGSYQGSQQSSWGQQDNWSGSQTQGNWNQQSGWGQQQWGGGW
KGYGQGTYGQAGYNQHGYGNGNWNSWNQQYYNNQYWGQQQQSGQTTAAGGQAEFTSDMVA
TTSTNAGTGYSYSQG
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgatggatccgtctaaattgaaagtggtggagttgcgagccgcgctgagcgagcgcggc
ctcgacaccaagggcaacaagccagtgctcgtcgagcggctacgcaaagctctggaggaa
gagactcaggaggagtatggttcagttttgcacgcagaaaatattgatgatacagctttg
aaagaaacacaagagagaatgattgaaactatgcgattgtcacaatcaccgagaacacct
agtagagcatctaggagtgccccgacgacgactccgacaaaaatttctaccagaaatgca
tcaagaacatctacaactccaaattcttctaagcagtctactccaagcaaatctcaatat
gacgaagaacaacttgtaatgcaacaagaggaaatgtcaaaattgtcccctgaaaagtgt
agggaagagccaaaagatgatgcatcttgtgttgttcaggataaaatgtatttgtcggta
tctgaaaaatatgaggaagaagaggcaaagcatgttaatattttagaaggtaataagtat
cgagcgaatattcttcaagtacctgcgacagaaccgtctgaaaaacttagtacaattgca
cacgtagatcaattttctataattcaagaagattgtgaagcaaaaagatctaatatagat
gaagatggcaaagttcaacagttaattgtggaaacaaaagctactacaaaattggaagaa
aaaactgagattaaggatgcagatattggtaaaatacaagatacttttgagagaaacatt
caagataaagtttcaattgagaaggaaaatgttaaacgtgcagaggataaatataacatt
aaggacaatatagacattccggaagttaaacaaccaacacatacgatgcctgatcaggta
gataaaacgtgtgatactgaattaaagcaggaagaaaagattattcatgatgattataca
gtgcaagataaaaaaatggacatttcagttaatataaaaaatttagatgaaaaactcgat
aatactgatatttcacaagataaggatacaatagccgaaaattatttcttgaagcaaaaa
gccacattagatgcggaagaaccaaatcaaatggaaagcaatgacaggaaaagaaaaaga
tctcctagcccaggggaagttcatcacccatctcctgtgttaccaaaagcggaggatgaa
ccagatcttgatgaatcagctgtaattttatcatggtatgattcagatttgaatttagtt
attgataaaaatggatttctctctgctacacctatgcacaatggtgatctctgtgatatg
tgggctggtgcaagagcatctcatggtgtcttaaatggaaaagtctattacgaagctaaa
attacgcaacactgtcctactgtcacaaaagacgaaaaacacttgcatatgcttagaatt
ggttggtcagtaccctctgcgtctatgcaacttggtgaggaaaaattgagttatgcatat
acgagcgctgggcagcagggtactgacaggaagtttacggactacggtttcccatttggc
aaggacgacgttgtgggatgttatcttgacatgacgcctgaaaatactgtagaactgttt
tatacagtaaatggcgagaatgttggatctgcatttagtgtttccaaggatgagcttggc
gatagaccattatttccgcatattctgagtaaaaattgtacgtttgtctgtaattttggt
caagaggagccatggtgcgagcgagttccaggatatgtcttagtgggtaacattgaatcc
gaggacacagtcgcagggccgcgtagaccagatgggaaggcggattgcgaagtgataatg
atgtgcggtttacccgcggcaggaaaaactacctgggcaatgaagcatgcgtctaatcat
cctgataaattatataatattttagcgctccacaacttgattgagaaaactggagatatt
gctctgtcagatcaagagcaaaacacctgtcaacgagatattattattggtagatgtact
cgcgcactcgaccaactaatcaatgtggcaggtggcagaagacgtaactatatattagat
cagaaaagcaacatatattcttccgtacaaagacgtaaaatgcggaatttctgcggatat
cagagaaaagcgattattgttttaccaacaaacgaggaatataatcaacggttgtccacg
cataatgcaatcgaaggaaaagtttccgagtctaaacttatggaaatgaaagcaaatttc
actgcacctttggcgggggaatctttcgatacagtggagtggatcggtcttgacgaggaa
gaaggcaagaagctcattgagaaatataacaaggaaggtaaagatgctggattcagtcag
caatcggcagcaaaacgaccacgtcttgacaagactgagggtaacaaagagacgcgtgat
tcgcggaacaatcgagacactcgagatcgaagaaataattatcaagatagaggtcgcaat
ccttcttggcgcggcgccaatatgggaggttggagaggagaaagaccgcaaagaggtggt
tacatgaggcacactgggggctatggacctcccgtcccatggagactacgaggacgagga
ggacctgcgatggtacgaggaggaacagacagaagaatgggtggagtagataggagacct
ggaaatgacagaaatcgatctgttgcgcctaggcaaggtggttggggttccatgagtgga
agttatcaaggatcacagcagtccagttggggtcaacaggacaattggtcaggtagccag
acccaaggaaattggaatcaacaaagtggctggggacaacaacagtggggtggcgggtgg
aagggatatggccaaggcacatacggtcaggcgggatacaatcaacatggatacggcaat
ggtaattggaatagctggaatcaacagtattacaacaaccagtattggggtcagcaacaa
cagagtggacaaactactgcagctggcggccaagctgagtttacaagcgacatggttgca
acgacatctaccaatgcgggaacaggatatagttactcgcagggataa
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