Solenopsis invicta (red fire ant): 105194381
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Entry
105194381 CDS
T03916
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soc03016
]
105194381
Enzymes [BR:
soc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
105194381
Transfer RNA biogenesis [BR:
soc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
105194381
Prokaryotic type
105194381
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
BBS2_Mid
IFN-gamma
Motif
Other DBs
NCBI-GeneID:
105194381
NCBI-ProteinID:
XP_011157570
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All DBs
Position
16:19367690..19374112
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AA seq
499 aa
AA seq
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MHGAKSYRVQSCFVSSPVFSVASYSQFSTSVSTKNVENEGSRVRAKCESRRIVVRRILDL
ECSAAAAEMELDGATSGERTTSAAMHPTADTEVDANVNTTMHGTKRLMDDSNENEAKVQK
TEEIVQKQTEATKAEVVQRIKRKNHAMLLGYIGKDYYGMQRNPNMKTIEEDLITALLKAD
LINTEQFENIRSINFQRAARTDKGVSAIRQIVSMKLPENIDKAVINQFLPDAIRVFGIKR
VTKGFNSKNQCDARTYRYIIPSFAFALEDQSLLKLGEEVNEDERIKQLSIIDEKPYTDYR
LSPESLDRLNSILKLLEGTNNFHNFTSKVKPLDPRAKRYIISFCCVETFVSNGIEFAVLE
VKGQSFMLHQIRKMVALVVAIARNMVPEETINEALKTMDKMDIPLAPSLGLCLCHVHYDH
YGKRYGTDGLHEALDWKECEEEVEMFQKAYILQHMVNTEISEQTTLKWLAGLPFYSFSNR
DILPVEDEKQEVEVVHNDV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcatggtgcgaagtcgtatcgcgttcaatcatgtttcgtatcttctcctgtcttctcc
gttgcctcgtattctcagttttcgacgagcgtgagtaccaagaatgtcgaaaacgaagga
tcgcgcgttcgcgccaagtgtgaatcaagacgaatcgtcgtgagaagaatcttggatctc
gaatgttcggctgctgctgccgagatggagctggacggagcgaccagcggcgaacgcact
acatcagctgcaatgcatccgacggctgacactgaagtagatgccaatgtaaatactact
atgcatggaactaaaagactcatggacgatagcaatgagaatgaagcaaaggtacagaag
acagaagaaatagtacagaagcagacagaagcgacaaaggcagaggtggtacaaagaatt
aagagaaaaaatcatgccatgttactgggctacattggcaaagactattatggcatgcaa
agaaatcctaatatgaaaactattgaggaagatttgattaccgccttactaaaggcagat
ttgataaatacagaacaatttgagaatatacgttcaataaattttcaaagagctgcacgt
acggataaaggagtgtcggcgattagacagattgtctcaatgaaactaccggagaatatt
gacaaagcagtaataaatcagtttttacctgatgcaatcagagtatttggaataaaacga
gtaacaaaaggttttaatagtaaaaaccaatgtgatgcacgtacctacagatacatcatt
ccttcctttgcatttgcattagaagatcagagtttgttaaaacttggagaggaagttaac
gaagacgagagaatcaaacagttatcaattattgatgaaaagccgtacactgactacaga
ttatctccagaatctttagatagattaaattcaattttaaagcttctggaaggtactaac
aactttcataactttacatcgaaagtaaaaccgttagatccacgtgcgaaacgttatata
atcagtttctgctgcgtagagacgtttgtttcaaacggaatagaatttgcggtcttagaa
gttaaaggacaaagtttcatgctgcatcaaattcgaaaaatggtagcgcttgtagtcgcg
attgcgaggaatatggtacccgaagagacaatcaacgaagcgttaaaaactatggacaaa
atggatataccacttgcacctagtttaggattgtgtctgtgtcatgtgcattacgatcat
tatggtaaaagatatggcacggatggcctccatgaagcattagattggaaggaatgtgaa
gaagaagtagaaatgtttcagaaggcatatattttgcaacatatggtgaacaccgaaatt
tcagaacaaacaaccttgaaatggctagcaggccttcctttttattcctttagtaacaga
gatatactacctgtggaagatgaaaaacaagaggtagaggtcgtgcataatgatgtttag
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