Solenopsis invicta (red fire ant): 105194457
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Entry
105194457 CDS
T03916
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105194457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105194457
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105194457
mRNA degradation factors
5'-3' decay
Decapping complex
105194457
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_HPS5
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Syntaxin
Motif
Other DBs
NCBI-GeneID:
105194457
NCBI-ProteinID:
XP_011157672
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All DBs
Position
7:3260161..3265445
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AA seq
1076 aa
AA seq
DB search
MPERNTAGDMSKTGEDNLLPHHYQQQVEFNGREDQHSVELCSTDVIIVPSPGNHDHGSSK
VKLKNIVDFTWDHHLYPGQLLAVHISGKYLAYGLKVGTGGGVVRVVYKELELRTLLRGMR
GAIQDLAFAHVPNAILACVDYTGSLFIHSIEPTPSELLSSLVLQVDAEDPSPTTHRVIWC
PYIPEDDAADADEVSKLLILTRGSKVELWSVSTVASRFRSVEATNSVVKEIGGMIEIDQH
SGTIVEAALSPDGTALATASTDGEVKFFQVFLHNNSHNNQPRCLHQWRPHGGRPISCLFF
PDDHKNYQPDVQFWRFAVTGCDNNSELKIWTCEMWTCLQTIKFAPNPSTGKLPVLKAGLD
LSAGYLFLSDIYNKILYVLSLIKDKNEAIACISTVSEFLLPYPILSFGIVDADQRKIRTG
ESLEDLCEEIDENDEQLVIYMYLVQPKSLQECHIAFKPASQANYLIDTLTVPDMRTVNGM
SGENCKGELSLSATIETTINHNTGGLNLMTPDAFSSPAKKESNELESNSESPDLRKVLPT
SPLTQAVQALNASDPPLVKNEIEEQAPASCGSSPSREVREILSLTKPDDETDEIDVKPES
KTNADEDWSNIPMVLLKDVSVHAMQESEEFPEDDENNVQRQEMKDEPKTPSLPTDDPATS
WRPNNDIINHELNNKLKSILEIVQDQCQEIKELRAEVTRLRQESPVSTRIESALTRMSQQ
QNANLEQTLYDQMTRQHEFLNTFETTIKDKIESTLPRTVEETIKPLKHQMRLDVNQMDEL
FQKNITELINSPHVKDILSLTTANAAKPALDIAFKEIFASVLLPNMEKVCQVMFNQIQDV
FFKGTREYLQHIESIIDKRYQRYNEQLNEMVSTLIREEMQIELNRILTTMQDNTIRAVRD
SIRENLNQQLTEISSARSRATTPAIPAATAADAQARVMSLLQRNQLNAAFQQALSASDLG
LVVLVCEKTEPSKVFSAPGAPGQGPRCILQQPVILSLVQQLSADLGHRTELKHRWLEEAI
LNLDPSDPVTREHMGTVLMTLQNQLATFVTSNPTHRSTRRMKMLAMATRALLSQHP
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagaggaacacggctggcgacatgagcaagaccggggaggataaccttctacct
caccactaccaacagcaggtggaattcaatggacgagaggatcaacattcagttgaatta
tgtagcacggacgtgattattgtcccttcccctggtaatcatgaccatggtagttctaaa
gtaaaattgaaaaatattgttgattttacatgggatcatcatctttatcctggccaattg
ttggccgttcatatatctggaaaatatttagcctatggtttaaaagttggtaccggtggt
ggggtagttcgtgttgtgtacaaggaattagaacttagaactctgctacgaggaatgcga
ggtgctattcaagatctagcgtttgcccatgttccaaatgcaattcttgcgtgtgtcgat
tatacaggatcactttttatacattcaattgaaccgacgccgtctgaattattatctagt
ttagtattacaagtagacgcggaagacccttctccgactactcaccgagtgatctggtgc
ccatacatcccagaagatgacgccgctgatgcagatgaagtatcaaaattattaatccta
actcgcggttccaaagtagaattgtggtcggtttcaacagtagcgtcaagatttagatca
gtagaggcaacaaattcagttgttaaagaaatcggtggcatgatagaaattgatcaacac
tcgggaactattgttgaagctgcacttagcccagatggcactgcattggcaactgctagt
acagacggagaagtaaaattctttcaagtcttccttcataataattctcacaacaatcaa
ccacgttgtttacatcaatggagacctcatggaggacgacctatttcctgcctgtttttc
cctgatgatcataaaaattatcaacctgatgttcagttttggagatttgctgtgacgggg
tgtgacaataattcagaacttaaaatatggacgtgtgaaatgtggacttgcttacaaaca
atcaaatttgctccaaacccttctacaggcaaattgccggtactaaaagcaggtttagat
cttagtgctggatatctatttctgtcagatatatataataaaattttatatgtactaagt
cttataaaggacaaaaatgaagcgatagcatgcattagcacggtatcagagtttctcctg
ccatatccaattctaagtttcggaattgtcgatgccgatcaacgtaagatacggactggc
gaatcactggaagatctatgtgaagaaattgatgagaacgatgaacaacttgttatttat
atgtatctagtccaaccaaagtcgttacaagagtgtcacattgcttttaaacctgcctca
caagcaaactatctcatagatacgcttactgtaccagatatgagaactgttaatggcatg
tctggagaaaattgtaagggagaactgtctttatccgctacaattgaaacgacaattaat
cacaatactggtggtttaaatctaatgacgcctgatgcattcagttcacctgcaaaaaaa
gagagcaacgaattagaatctaattccgaaagtccagatttaaggaaagttttacccact
agtcctcttacacaagcggtccaagctttgaacgcatctgatccgccactggtaaaaaac
gaaatagaagaacaagctcctgcaagttgtggtagcagtccatccagagaagtgagagaa
attttatcccttactaaaccagatgatgaaactgatgaaattgatgtcaagccggaatcg
aaaacaaatgccgatgaggattggtctaatatcccaatggtcttgcttaaagatgttagt
gtacacgcgatgcaagagtcggaagaatttcctgaagacgatgagaataatgtacaaaga
caagagatgaaagatgaaccaaaaacaccatcccttcctactgatgatcctgcaacatcg
tggcgaccaaacaacgatattattaatcatgaattaaacaacaaattgaaatctatttta
gaaatagttcaggatcagtgtcaagaaataaaggagttgcgtgccgaggttactagatta
cggcaagaatcgccagtatccacgcgaatagaatcggcattgacgagaatgtctcagcag
caaaatgccaacttggaacaaactctatatgatcaaatgactcgtcaacacgaatttctt
aatacatttgagacaacgatcaaagataaaattgaaagtaccttgccacgtacagtcgaa
gaaactataaagcctttgaaacatcaaatgagattagatgtaaatcaaatggatgaactc
ttccagaagaatataactgaattaataaacagtcctcatgtaaaggatatcctatctttg
acaactgcaaatgcagctaaaccagctctagatattgcttttaaagaaatatttgcatct
gtcctcttacctaatatggaaaaggtttgccaagtaatgtttaatcaaatccaagacgtc
ttttttaaaggtactcgcgaatatttacaacatattgagtcaattatcgataaacggtat
caacgttataatgaacaattaaacgaaatggtatcaacattaatacgcgaggaaatgcag
atagaattgaatagaattttaacgacgatgcaagataataccattcgggcagttcgtgat
tccatacgagaaaatctgaatcagcaacttacagaaatttctagtgcacgatcaagagct
acaacacctgctatacctgcagccactgcagctgacgctcaagcacgtgtcatgtctctt
cttcaaagaaatcaactaaatgcagcttttcaacaggctttaagtgcaagtgatttagga
ttggtagtactagtgtgtgaaaaaacagaaccttcgaaagtattttcggctccaggagcc
ccaggacaaggtccaagatgcattttgcagcaacctgtaattctttctctcgtacaacaa
ttatctgctgatctaggacatcgtacagaattgaaacatagatggcttgaggaagcaata
ttgaatttagatccaagtgatcctgtaacacgagaacacatgggcacggtgctaatgacc
ctacaaaatcaattagctacatttgtaacaagtaatccgactcatcgatcgacgcgccgc
atgaaaatgctcgctatggctacgcgtgcattattaagtcagcatccttga
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