Solenopsis invicta (red fire ant): 105194510
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Entry
105194510 CDS
T03916
Name
(RefSeq) protein slit isoform X1
KO
K06839
slit 2
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
soc00536
]
105194510
Glycosaminoglycan binding proteins [BR:
soc00536
]
Heparan sulfate / Heparin
Axon guidance molecules
105194510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
hEGF
LRR_1
LRRCT
EGF_TEN
EGF_3
LRR_LRWD1
LRR_EndoS
ATP1G1_PLM_MAT8
LRR_NXF1-5
LRR_6
Motif
Other DBs
NCBI-GeneID:
105194510
NCBI-ProteinID:
XP_011157760
LinkDB
All DBs
Position
16:complement(19496127..19823163)
Genome browser
AA seq
1507 aa
AA seq
DB search
MARAMTPAWSLRLLGVSCGSVLCAWGLLLILSVLGGGASHGTGIGNFGLGSMTGTMDDLN
GVRCPWACTCGGQEVDCSHRELTQIPGDLASLIIAEKLDLQGNNVSVIFKTDFEDMATLH
VLLLSNNQIHTIERGAFQDLVAVEKLRLNNNQIRHLPDLLFSNMMNLKRLDLSHNQIATI
GPKTLRGVSALRHLLLDNNVLTCVDEASIRELKDLEILMLNNNKLVTLGKEMLNGLSHLR
TLKLADNAFACDCHLAWLSRHLRAHSRLGQHTRCASPAHLKDRNLADVQEHEFKCSGLVE
RTGSECSAEPQCPHPCKCADGIVDCRENSLTKVPTHLPEDTTELRLEQNGITEIPPKAFS
PYRKLRRIDLSNNQIKKVAADAFHGLKSLESLVLYGNKITELPAGLFQGLTNLQLLLLNA
NEISCIRTDLFKDLTGLTLLSLYDNNIRSLANGTFANLRSIKTLHLARNPFICDCNLRWL
SAYLHAHPIETSGAKCDTPKRAQKRKIDSMRDDKFKCKGDEELLTKRAGECILPGACPAP
CTCNGATVDCSNKRLTAIPKDLPLYTSTLLLSNNELDKIKADGLFEKLPELQHLDLRKNK
ISRIEASAFQGAHNLTDLLLSENRLREVHNKMFAGLSSLKTLNLHGNSITCVMPTSFEGM
PHIRSINMQGNPLSCNCYLAWFAGWLRKRDIAGITGRCHDPPRLKDAIIKDIPHHEFKCN
NDSVGCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGIPPETTELYLDVNDIKTIQPERLN
HLRILTRLDLSNNQIGMLSNDTFKNLTKLSHLIISYNKLQCVQRNALAGLKNLRIISLHG
NDISVIPEGAFEDLKSITHLALGSNPLYCDCSMRWLAEWVKKDYVEPGIARCMEPPAMRD
KLLLTTPASAFQCKTKQQPAEVLAKCDLCYTSPCENGGFCEALPDRQFRCKCTPGYHGDR
CQHKIDACYGNPCRNSGTCKVLEEGRFSCDCAPGYKGLRCESNVDDCANNRCANNATCVD
LVQAYRCDCAPGFMGEYCEEKIPFCTKGHDPCENGGRCVDHKTHYSCECPVGFTGLNCST
NLDDCVDHMCQNGATCIDGINNYECKCAAEYTGRYCEAAPSTAMLYPQTSPCAHHDCQYG
ACFQPAPSAADYLCQCHPGYTGKRCEYLTSLSFVDNSSLVELESLRTRPEANVTIIFTTT
QENGVLFYNGQHDGHIAVELFNGRVRVSYDVGNYPTSTMYSYEMVTDGKPHMAELLAIKK
NFTMRVDRGPARSIINEGPKEYLKLVTPMFVGGVAPEVAKVAFTEFHLRNITSFQGCISE
MWINHKLVDFSNAAKMHRVTPGCATSDEEADEARDVVEAEGINNSGSNEESMPQEHMPRE
HSDIIMSVSGLVPSHACIGHECKKGSQCIPSPYGNGYSCRCQTGWQGRYCEKAPTCRKEH
TREYYSENGCRSRRPVKLAKCWGSCGNSCCLPRKTKRRKVRLICTDGMRYTKDVDLVRKC
TCTRKCY
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtgccatgacgcctgcttggtcgctacgcctactcggcgtcagctgcggttcc
gtgctctgcgcctggggacttttgttgatattatccgtgcttggtggcggtgcctcgcat
ggcaccgggatcggtaactttggcctcggtagtatgacgggtacgatggacgatttgaac
ggcgttaggtgtccttgggcgtgcacgtgtggcggacaggaggtcgattgctctcatcga
gaactgacgcagattcctggtgacctggcgagcctgatcatcgcggaaaaactagacctt
caaggaaataatgtatcggtgatattcaagacagattttgaagacatggcaacgctccac
gttttattgctgtcaaacaatcaaatacacactatcgaaagaggggctttccaagatctg
gtggcagtggaaaagctacgactaaacaacaatcaaatacgtcacttgcccgatcttctc
ttcagtaatatgatgaacttaaaacgcctagatcttagccacaatcagatcgccaccata
ggaccgaagactctcagaggagtgtccgctctcagacatttgttacttgacaacaatgtg
ttgacctgcgtggacgaggcttcgatacgagaactgaaagacttggaaatattaatgttg
aacaacaacaaacttgtaacgctcggcaaggagatgctcaacggcttgtcgcatttgcga
actttgaaacttgcggataacgcattcgcttgcgattgccatttagcatggttatcgcgt
catttgagggctcattcacgcctagggcaacatacacgttgcgcatctccggctcatctc
aaggatcgcaatcttgccgatgtgcaggagcacgagttcaagtgttcaggcctggtcgag
cgaacgggatcggaatgcagcgctgagccccaatgcccgcatccttgtaaatgcgctgat
gggatcgtcgattgcagagaaaactccttgacgaaagtgccaacccacctacccgaggac
accactgagttgcggctggaacaaaatggcatcacggaaattccacccaaggctttttcg
ccatatagaaaattgcgaagaattgacctgagcaacaaccagataaaaaaggtagcagcg
gatgcttttcatggattgaagtccctcgaatccttagttctttatggcaacaaaatcacg
gagctgccagctggtcttttccaaggcctgacaaatctgcagttattgttactgaatgcc
aatgagatatcatgcatacgaacagacctgttcaaagacttaaccggtctcaccttacta
tctttgtacgacaacaatatacgctcgttagctaatgggacttttgccaacctgcgaagc
attaaaacattacacttggcgaggaatccgttcatctgcgattgcaatctacgctggctg
agcgcgtatcttcacgcgcatcctatagagacatccggtgcgaaatgcgacacgccaaaa
agagcgcagaaacggaagatcgattcgatgcgggacgacaagttcaaatgtaagggtgac
gaggagctattaacaaaaagggccggcgagtgcattctgcctggcgcctgccccgctccg
tgcacatgcaacggcgcgacggttgattgctccaacaagagattaactgcgataccgaaa
gacttgccgctttacacgtcgactttgttgttgagcaacaatgaactggacaagatcaaa
gcagatggtctttttgagaagctgccagagctgcaacatctggatctcaggaaaaataaa
atctcccgcatcgaggcgtccgcttttcaaggggctcacaatctcaccgacctgcttttg
tccgagaacaggctgcgagaagtacacaacaagatgttcgccggcctatcgagccttaaa
acactgaatctccatggtaattccattacgtgcgttatgccgacatcgttcgaaggaatg
ccgcacatacgttccatcaacatgcaaggcaacccgttatcgtgcaactgctatctcgcg
tggttcgccgggtggctgaggaagcgagatatagccggaatcactggccgttgtcacgat
ccaccgcgattaaaggatgccatcatcaaggacattccgcaccacgagttcaaatgcaac
aacgacagcgtgggttgcctaggcgacgattactgcccgcctcaatgtaattgcgcgggt
tcggtggtgagatgttcgaggtctcagcttacagagattccacgcgggattccaccggaa
accaccgagctgtatttggacgtgaacgacatcaagacgatccagccggagaggctgaac
cacctgaggattctcaccagactggatctgagcaacaaccagatcggaatgctgtccaac
gataccttcaagaatctcacgaagctgtcgcacctaatcatcagttacaataaactacag
tgcgtgcaacgaaatgctctcgcgggactgaagaacctgcgaataatttcgctgcacggt
aacgacatatcagtgatcccagagggagcattcgaggatctcaagtctataacacatctt
gccctggggtccaacccgctttactgcgactgcagcatgcgatggttggccgaatgggtg
aagaaagattatgtggagcctggcatagctaggtgcatggaaccacccgcgatgagagac
aaattacttttgacgacgccggctagtgcctttcaatgcaaaaccaagcagcagccagcc
gaagtcttggccaagtgcgacctgtgttacacctcgccatgcgaaaacggaggattttgc
gaggcgcttccggaccggcagttccgttgcaagtgcacgccaggatatcacggggaccgg
tgtcagcataaaattgacgcgtgctatggaaatccttgcaggaactccggaacttgcaaa
gtactggaggaaggaagattcagttgcgactgcgcccccgggtacaagggacttcgatgt
gagagcaacgtcgacgactgtgccaacaacaggtgcgctaacaacgcaacctgcgtcgac
ctcgtacaggcctatcgatgcgactgcgccccaggattcatgggagaatactgcgaggag
aagatacccttttgcacaaaaggtcacgacccctgcgagaatggaggccgatgcgtcgac
cacaagacccactacagctgcgaatgcccagtcggcttcaccggcctcaattgttccaca
aacttggatgactgtgtcgatcatatgtgccagaacggtgctacttgcattgacggcata
aacaattatgaatgtaagtgcgcggcggaatatacagggagatactgcgaggctgcaccc
tcgacagccatgctgtatccacagacaagtccgtgtgcccaccacgactgtcagtacggt
gcctgcttccaacccgctccctccgccgcggactatctttgccagtgccatcccggctat
accggaaaaagatgcgagtacctgacgagtctgagcttcgtggacaatagctcgctggtc
gagctggaatcgctacgcacgaggcccgaggcgaacgtgaccatcatattcacgaccacg
caggaaaacggggttctcttttataacgggcaacacgacgggcacatcgccgtcgagctc
tttaatgggcgggtcagggtttcgtatgacgtgggtaattatcctacctcgacgatgtac
agctacgagatggtgaccgacgggaagcctcacatggcggagcttctggcgatcaagaaa
aattttacaatgagggtcgaccggggccccgccaggagcatcatcaacgagggtccgaag
gagtatctcaagcttgtcacgccgatgtttgtcggtggcgtagcgccggaagttgctaaa
gtcgcatttaccgagtttcaccttagaaacattacgagcttccaaggctgcatctccgag
atgtggatcaatcataagttggtagacttcagcaacgccgcaaagatgcatcgcgttact
cccggatgtgctactagcgacgaggaggccgacgaagcgagagatgttgttgaggctgag
ggaattaacaatagtggcagtaacgaggagtccatgccacaagagcatatgcctcgcgaa
cattcagacatcattatgtcggtatccggattggtgccttcgcacgcatgtatcggacat
gaatgcaaaaagggatcccaatgcataccgtcgccgtacggcaacggctattcttgtcgc
tgtcaaaccggctggcaaggacgatactgcgagaaagcaccgacatgtcgcaaggagcat
accagggagtactacagcgagaatggatgtcgaagtcgacgacccgtgaagcttgctaaa
tgttggggaagttgcggcaattcctgctgtttaccgcggaagactaagcggcgcaaggtc
cgactaatttgcacggacggcatgcggtacaccaaggacgttgacctggtgcgtaagtgc
acgtgtacccgcaaatgttactag
DBGET
integrated database retrieval system
