Solenopsis invicta (red fire ant): 105194576
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Entry
105194576 CDS
T03916
Name
(RefSeq) ATP-dependent RNA helicase dbp2 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105194576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soc03041
]
105194576
03009 Ribosome biogenesis [BR:
soc03009
]
105194576
Enzymes [BR:
soc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105194576
Spliceosome [BR:
soc03041
]
Complex A
U1 snRNP components
U1 related factors
105194576
Complex B
105194576
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
Pre-60S particles
Helicases
105194576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-GeneID:
105194576
NCBI-ProteinID:
XP_011157859
LinkDB
All DBs
Position
2:complement(18305439..18313798)
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AA seq
615 aa
AA seq
DB search
MFSRDRSQNRGRRGGTIKVGTNISSKGSSDNGRRANRFSIPRGSVSNVRGGLKGKQPGGG
LRKVNWDLCTLEPLRKDFYIEHPAVRNRSNEEMNRFRENTEITVKGEHVPNPIQYFEEGN
FPPYVMENIHREGYLRPTPIQAQGWPIALSGRDLVAIAQTGSGKTLGYILPAIVHIIHQP
RISSGDGPIVLILAPTRELAQQIQEVANSFGEMAAVRNTCIFGGAPKGPQAHDLEKGIEI
CIATPGRLIDFLEKGTTNLYRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSA
TWPKEVRALAEDFLTDYIHLNIGSLTLSANHNITQIIDVCQEYEKDLKLYRLLQEIGTEK
ENKTIIFVETKRKVDDITKNIRREGWQAVSIHGDKNQQERDHVLQEFRNGKAPILVATDV
AARGLDVDDVKYVINFDFPSSSEDYIHRIGRTGRKRQTGTAYAFFTTHNMKHAGDLIEVL
REAGQNVNPRLSEMAEMAKAGNFGGRNGKRFGGSSGGNGAERTNSRRSNDVRGRGGGSVR
GRGLSHSGISYKPSSSFYSGIDYCNYSNMKQNTSLGQNTTYGYSTQRSYGQGNMLQNYEV
GDNYGSGYPYRSTTY
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtcgtgaccgaagccagaataggggccgtcgtggcggtactatcaaagtagga
acaaatattagtagtaaaggcagcagtgataatggacgtcgtgctaacagatttagcata
cctagaggaagtgtcagtaatgtgcgaggaggattaaaaggaaagcaacctggtggtggc
ttgagaaaagtaaactgggacctttgtactttggaaccattgcgcaaagacttttatata
gagcatcccgcagtcaggaacagatctaacgaagagatgaatcgatttcgagagaacaca
gaaataactgtgaagggtgaacatgttcctaatcccatacaatattttgaggagggaaac
tttcctccttacgtaatggagaatattcatagagaagggtatttacggcctactccaatt
caagctcaaggatggcctatcgctcttagtggtagagatcttgttgcgattgctcaaact
ggttctggaaaaacacttgggtatattttacctgcaattgtgcacattatacaccaaccg
cgtataagcagtggcgatggtccaattgttttgatcttagctccaactcgagaattagct
caacaaattcaagaagtggccaatagctttggggaaatggcagctgtaagaaatacatgt
atcttcggcggggctccgaaaggaccacaggcgcacgatttggagaaaggcattgaaata
tgcattgctacgccaggtagacttatagatttcttagaaaaaggaactaccaacttatat
aggtgtacttatttggtactcgatgaagccgatcgtatgctagatatgggattcgaacct
cagatacgaaagataattgagcagatacgacctgatagacaagtattaatgtggtcggcg
acgtggcctaaagaagttcgtgcgctcgcagaggactttttaacggattacattcatctc
aatataggttctctcactctgtcggccaatcacaacatcactcagatcatcgatgtttgt
caggaatatgagaaagatttaaagttatatagattgcttcaagagatcggtactgaaaag
gagaacaagaccatcatatttgtagaaaccaaacgtaaagtggacgatatcacgaagaac
attagacgcgagggatggcaagctgtgagtattcacggcgacaaaaatcagcaagaaagg
gatcacgtattacaagaattccgcaatggaaaagcgccgattttggttgcaacagacgta
gcagctagaggtttggatgtggatgatgtgaaatacgttataaatttcgattttccatct
tcgtcggaggattatatacatagaatcggtcgaactggacgtaagcggcagaccggaaca
gcgtatgcatttttcacaactcataatatgaagcacgctggagatttgatagaagtttta
cgagaagctggacagaatgtcaatccgcgtctcagtgaaatggcagagatggctaaggcg
ggaaactttggcggcagaaatgggaaacgtttcggaggttcttctggtggtaatggtgct
gaaaggactaacagtcgaagaagtaatgatgttagaggaagaggcggcggttcggtgaga
ggaagaggcctctctcacagcggaatttcttataagccttcttcgagcttttattcggga
atagattactgtaattatagcaatatgaaacagaatacttctttgggccagaacacgacc
tatggatatagcacgcagagaagctacgggcagggaaatatgctacaaaattacgaagtt
ggcgataactatggaagtggttatccatacagaagcacaacttattaa
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