Solenopsis invicta (red fire ant): 105194627
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Entry
105194627 CDS
T03916
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105194627
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
soc01002
]
105194627
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105194627
03036 Chromosome and associated proteins [BR:
soc03036
]
105194627
Peptidases and inhibitors [BR:
soc01002
]
Metallo peptidases
Family M1
105194627
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105194627
Coactivators
SAGA/TFTC/STAGA complex
105194627
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105194627
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
Peptidase_M1
HEAT_2
Motif
Other DBs
NCBI-GeneID:
105194627
NCBI-ProteinID:
XP_039312147
LinkDB
All DBs
Position
12:complement(9604307..9610814)
Genome browser
AA seq
1203 aa
AA seq
DB search
MKKEKTVDNSRPYKLAHQILSLTEISFQKKSITGFVELTIIPLRDTLRLVKLNAKQCKIY
RVCLNDTYEAPFQYFDPFLDICQGDSKQRSLEFFSNMHLAAAQKVDFDNNAGELIVQIPP
DAVHLVAKGRGLRISIEFFLEQPRGGVHFVIPNCEGTLAERGAHMYTYSYENSSRLWFPC
VDSFAEPCTWKLEFTVDDAMTAISCGDLVEVVYTPDMCRKTFHYVLNTPACAPNIALAVG
PFEIFVDPYMHEVTHFCLPQLLPSLKVSAKYMYEAFEFYEEILSNRYPYSCYKQVFVDEI
DEDINAYATMSILHTNLLHSTAIIDQVYITKKAMAQAIAEQFFGCFISMQNWSDTWLPKG
ISTYLTGLYAKKFFGNNEYREWIQSELQAVVKYEEQFGGIILDPSQAPAPLPIAANTPAP
APRAPEPGFYFPIKNLHTMSPKYIEVLRKKAHLIMRMLEHRIGQEVLLQVFNKQLSLAAN
AAQQKIESGLWSHMLISTNVFAKATFTVTGKDMSVFIDQWVRTGGHTKFSLSFIFNRKRN
TVELEIRQDTTHQRGIRKYVGPLVVNIQELDGTFKHTLQIEGTMARADITCHSKSRRNKK
KKIPLCTGEEVDMDLSAMDDSPVLWIRLDPEMTIMRAVQIEQPDYQWQYQLRHERDVTAQ
LEAIEALQHHPTPATRLALTDTIENEHCYYKVRLRAAHCLTKVGNAMVATWSGPPAMLAI
FRKLFGSASCRRIIKQNNFTNFQHYFLQTTIPVAMAGLRNNHGICPPEVLSFLMDLFKYN
DNSKNRYSDNYYRAALIEALGATVTPVISVQQGTAITAEFLSIDTKAILEEVTRNLNLEK
LLPCYKYTVSVACLKVIRILQKFGHLPSNPHLFRAYAAYGQFEDIRIAALEALVDFTRVD
GKWEDLEFLLDMAENDPHPGIRHRLVRLMVENPPFERAHEHHLDKPDLVDRIWNLINGML
SHDAKLRCDLVDLYYTLYGMKVPFCLPVAEITTITKPRKAGPPSSEREVKTAPMQHVRHE
SIEEVENLSVSNKRKTSPSKDPPSSSNQVEHAPEPKRQKTTNNQDERRTPVPGEEKVKSE
YYSDNSASLPGIMGTPGPVGFEPGMFRKDSKDHKPKGDSSNKNKKKKKDKKKHKHKHKHK
HDYKHNKDKKKKENDKGKDKDKDKDNKSKDKDSSVLKMKDETLSSASSSQSPEPTATNEI
LFP
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaaaagacggttgataacagccgtccctataaattagctcatcaaatatta
agcttaacggaaataagctttcaaaagaagagcataactggttttgtggagttgacaatt
atacctttgcgagatacactgagactggtgaagctcaacgccaaacaatgcaaaatatat
agagtgtgtttaaatgacacttatgaagcacctttccagtattttgatccatttctggat
atctgccaaggggatagtaaacaacgatccttggaatttttctcaaatatgcacctagcg
gcagctcagaaagttgattttgacaataatgctggcgaattaatagttcaaataccacca
gatgcagtacacttggtcgcaaaaggcagaggattaaggattagcatcgaatttttcttg
gagcagccacgaggaggagtgcattttgtaataccaaactgtgaaggaactctagctgaa
agaggtgcccatatgtatacgtatagctatgaaaattcatctagattgtggtttccatgc
gtggatagttttgctgaaccgtgtacttggaaattggaatttaccgtcgatgatgcgatg
actgcaatttcctgtggagatctggttgaagtggtctacacacctgacatgtgtagaaaa
acatttcactacgtgcttaacactcctgcgtgcgccccaaacattgctttggcagttgga
ccttttgagatttttgtggacccctacatgcatgaagtgactcatttctgtctgcctcaa
cttttaccatcactgaaagtgtctgcaaaatacatgtacgaagcattcgaattttatgag
gaaattttgtcaaatcgatacccgtattcttgttacaagcaggtctttgttgatgagata
gacgaagacattaacgcctatgctacaatgagcatcttacacacgaatttactgcattct
accgcaattatagatcaagtatacattactaagaaagcaatggcgcaagcgattgcagaa
caattttttggatgttttatatccatgcaaaattggtcagatacgtggttacctaagggt
atttccacctatttaacaggactctatgcgaagaaattttttggaaataatgaatataga
gaatggattcagtctgaattacaagctgttgtgaaatatgaagaacaatttggtggtata
atactagatccatctcaagcaccagcgccattacccattgcggctaatactccagcgccg
gctcctcgagctcccgaacccgggttttattttcctattaaaaatttgcataccatgtct
ccaaaatacattgaggttcttcgtaagaaagcgcatctaatcatgagaatgctggaacat
aggatcggccaagaagtattgcttcaagtattcaataaacaattgtctctggcagctaat
gctgcgcagcaaaaaattgaatctggcctgtggtcgcatatgttaattagtacaaatgta
tttgctaaggcgacctttactgtaacggggaaagatatgtcagtatttatagatcaatgg
gtgagaacaggaggacatacaaaatttagcctaagtttcatatttaatagaaaaagaaat
acagtagaattagaaattaggcaagacactacgcatcaaagaggaattaggaaatatgta
ggtccgttagtagtcaatattcaagaattggacggtactttcaagcacacgttacaaatt
gaaggtacaatggccagagcggatatcacatgccacagtaaaagtcgtagaaacaagaaa
aagaaaattcctctgtgtaccggcgaagaggttgatatggatctctctgctatggatgat
tctccagtattatggattagacttgatcctgaaatgacaattatgcgcgctgtgcaaatt
gagcaacctgattatcagtggcaatatcaattaagacacgagagagatgtcaccgcgcaa
ttagaagcgatcgaagcgttgcagcatcatccgacgcctgccacacgattagcattgact
gatacaattgagaacgaacattgttactataaagtcagacttcgcgctgctcattgtttg
acaaaggtgggaaacgcaatggtagcaacatggtcaggcccaccagcgatgttggctata
tttagaaaattattcggatccgcgtcgtgtcggcggattattaaacaaaacaatttcacg
aattttcagcattactttttacaaacgactataccagttgcgatggcgggtttacgcaat
aatcatggaatttgtccaccagaagtactatcttttctaatggatcttttcaagtataac
gataacagtaagaatagatattctgataattactacagagccgcactaatcgaagctctt
ggcgcaactgttacaccggttatcagtgtgcaacaaggaacggctatcacagcggaattt
ttatcgattgacacgaaagccattttagaagaggtgacaagaaacttgaacttagagaaa
ttattaccttgctacaaatataccgttagcgtagcttgtctaaaagttatacgtatcctt
caaaagttcggacatctgccaagcaatcctcatcttttcagggcatatgcagcatatgga
caatttgaagacattcgaatcgccgctttagaagcgttggttgattttactcgcgtggat
ggtaaatgggaggacctagagttcttattagatatggcagaaaatgatccgcatcccggt
atacgtcatagacttgtacggcttatggtggagaatccaccgttcgaaagagcccatgag
catcacttggataaacccgatctagttgatcgtatatggaatttgattaatggcatgctg
tcgcacgatgcaaagctgcgttgcgatttggtagacttgtactacactttgtatggtatg
aaagttccattttgtcttcccgttgctgaaattacgacgatcacaaagcccaggaaagcc
ggcccgccaagttcagaacgtgaagtgaaaaccgcaccgatgcaacatgtgagacacgaa
tcaatcgaagaagttgagaacttatcagtttccaacaagaggaaaacatctcccagcaaa
gatcctccaagttcatcaaatcaagtggaacacgcgccagaaccaaaacgacaaaaaaca
actaataatcaggacgaacgaagaactccggtacctggtgaagagaaagtaaaatctgag
tattatagcgataattccgcgtcactgcctggtatcatgggaactcctggtcctgtagga
ttcgagcctggaatgtttaggaaagattcaaaagatcataagccaaaaggcgattccagc
aataagaataaaaagaaaaagaaggataagaaaaagcacaagcacaaacataagcacaaa
cacgattacaaacataataaggataagaagaaaaaggaaaatgataaaggtaaagataag
gataaggataaggataataaaagcaaggacaaagattcatccgttttaaagatgaaagat
gagactctcagctctgcaagttctagtcaaagtccagagccaaccgccacgaacgaaatc
ctttttccttag
DBGET
integrated database retrieval system
