Solenopsis invicta (red fire ant): 105194645
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Entry
105194645 CDS
T03916
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105194645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105194645
03036 Chromosome and associated proteins [BR:
soc03036
]
105194645
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105194645
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105194645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
Beta-prop_EIPR1
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_pof12
WD40_MABP1-WDR62_1st
MIOS_WD40
Beta-prop_SPT8
CPSF_A
Motif
Other DBs
NCBI-GeneID:
105194645
NCBI-ProteinID:
XP_011157972
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Position
11:complement(3387674..3389832)
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AA seq
345 aa
AA seq
DB search
MGENVQGTFVSEKISKIRWQYENFTEAKNFLTGSWDNPINKITYWTFKTNYDEESYPVVL
SSYSFLGDVTELKFISKDFFVAASSLGSIRLLQIDEDTCTEFKEHMSWEFIHNFKTTDYA
SCTALSTFEQDIASVGEDGKLNLLTAAEKKPVRVIENADSCSIYCADFLKHNEVLTGNSR
GHMKVWDLRNDRDVPATTFMLSDQIKTATTSITHHPTQRHIVVAGGEDGSLTVWDLRQNT
YPMSQLNAHTKAVSEILFHQDRPDNLFTCSVSGELWHWNNAQSSKLKLDSADMHWLNTIS
ANGKVNVNSLCAAMHKPINSIDINRSTLLFGCDNEAIYIIRNVLI
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaatgtgcaagggacgtttgtgtctgagaaaatttccaaaataagatggcaa
tatgaaaattttacggaagcgaagaattttttaaccggtagttgggataacccgataaat
aaaataacatactggacatttaaaacgaattatgacgaagagtcataccctgtagtcttg
tcgtcatattcatttcttggggatgtaactgaactgaagtttatcagtaaagatttcttt
gtcgctgcctcatctttaggatcaataagattactgcaaattgatgaggatacctgtact
gaatttaaggaacatatgtcatgggagtttatacataattttaaaacaacagattatgcc
tcttgcactgcattgtctacttttgaacaagacatagcttcagtgggagaggatgggaag
cttaatcttctcacagctgcagaaaagaaaccagttagggttattgaaaacgctgatagt
tgctctatatattgcgccgacttcttaaaacacaatgaagtactcacgggaaattccaga
gggcatatgaaagtttgggatctgagaaatgatcgagatgtgcccgccactactttcatg
ctctctgatcaaattaaaacagcaactacgagtattacccatcatcctacacaaaggcat
attgtggtcgccggtggagaagacggcagtttaactgtctgggatttaaggcagaatact
tatccgatgtcacaactcaatgcgcacaccaaggccgttagcgagatattattccatcaa
gacagacctgacaatctgtttacttgttctgttagcggagagttgtggcattggaacaat
gcacaaagttcgaaactaaaacttgattctgcagacatgcattggttgaatacaattagt
gcaaatggaaaagttaatgtgaattcactgtgtgctgctatgcacaaaccaataaacagt
attgatatcaacagatcgacattactttttggatgtgacaatgaagctatatatattata
agaaatgtacttatttaa
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