Solenopsis invicta (red fire ant): 105194792
Help
Entry
105194792 CDS
T03916
Name
(RefSeq) ABC transporter A family member 1 isoform X2
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105194792
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soc02000
]
105194792
Transporters [BR:
soc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
105194792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
RsgA_GTPase
AAA_29
TsaE
DLIC
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
105194792
NCBI-ProteinID:
XP_011158198
LinkDB
All DBs
Position
1:complement(21470356..21515772)
Genome browser
AA seq
1703 aa
AA seq
DB search
MNSCALYFSQLRAMLVRNLLLKKRDTRKTFMEVVLPLFILGALIVVKVMIPNPNFPAITT
QRHEGNVFELFNGYKNNTIAVVPNSTETLTFLSSMNTLWLSLWDYPGKLPLNFMVFDTKD
DLQAAYWRDPYSIPLAVIFEDPQPISQRLIYEIRTNPSYTLPPPPTKLYSAPISCRKNKT
GHWMDDILSIKTGESCPVNNYLHSGFLALQMITDITKIKLENSDVTIPDIKLIMFPKEPY
TADWMLAFRVVIPLYMVLALSQFITYLLILIVGEKENKIKEGMKMMGLNDSVFWLSWFII
YSIFVFLLSAVGVVLLFTLQMFQHTHFLPIFLLVVLYSFSVIMFAFMITPFFDKSRTAGV
LGNFAVTILSLMYFIQVFVSDSSSVTYWLVSLMSPTAVALAMDKALVLDLQGEGVNFDNL
WSGPGIPFGGSLIMMSLDIILYGYLAYYLDSVIPSEHGTKKPPWFCFLPGFWCKKKVQRV
PSSNGESNSFVPGEEANRDVEPVVREMKGREAIRIADLYKSFHKCKRPEIKAVNGINLTI
YEGQITAILGHNGAGKTTLFNILTGLTAPTSGTALIFGYDVRDSNDMRAIRSMTGICPQH
DILFDLLTPREHLEFFAAVRGIPRPMIRHEVKKTLKDIDLVEKADTFARYLSGGQKRKLS
VGIAIIGDPKIIILDEPTAGVDPYSRRQLWSLLQSRRHGKVILLTTHFMDEADILADRKA
VISRGKLRCCGSSLFLKNKFGIGYHLTLVLEGNAREHAISRLVMSHVSKAEKARRHGREL
SFILPHNSVENFAPLFSAIEHEIKTRSSRLGISSYGVSMTTLEEVFLHLEKDEETECTMD
NLSKKMVRNRALSRSLSLQSKSTSYQSLQNEGVTVQNDGQGKANDLPDGVHNDRNPPVLG
LGLDPIKIRPNFCQTLYAMLRIRVLRLIRNLQLLYFTIIMPLALIVLGLYLNSIGTVEVK
MESLKLNSHTYNETGILYLNNTDHDVTQLVDSVSQDAKHIEEYDGNFANLMNIAPHIAAF
NINDYNLKPPRLNLTVTYNDTMQHSLPILINILSNAYYRLILGKNEVYTPIEVYTHPFQQ
TSQPQQFNVGTASCALLLGMVFILLPITLAVDMVYDREIKAKNQLRVNGLSFSMYFLSYF
IVLLGLMTFICLCILGIIFLFDVPSLREIPAIITLGILIMLYCPSSILFSTCLSYIFDKV
DSAQSMLPNIATFFGLLPFVFVMILDMKGLGGSASFALHVAFSLLNSMYVPYAAVYYVDR
VHLMCSINAACHYLAMSDYFTMEIMSLAFGALLQCPIWFFVLLLLDINKSGGNVSDMFKH
YFLHDGDSIREEIMENSDIGEHEDTDVKGERQKVFNFVVSPALGQEPPLVLLQNLRKEYR
PKESGCSCCCSKREDERNIAVRNLSLAVEPGEVLGLLGHNGAGKTTTMKIIIAEEAPTKG
RVQISGLNINTHMTEAFRQMGYCPQHDAQWKNITVREHLECYAAIRGVPWSEVDRIVDLY
LSGLQIHEHADKQSQECSGGTKRKLSFAMAMVGGPKVILMDEPSTGMDPRSKRFLWDTIL
ASFQGGRGVILTTHSMEEADALCSRVGIMVKGQLRCIGSTQHLKNLYGAGYTLEMKLLGG
DCTPTTPSGDRIAGLKEFVAGLFPDATLEESFADRLVFAVPQHAVNSLAECFTQLEKAKL
ELDIEEYSFSQTTLEQVFLKFSH
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgtgtgcgctctacttttcccagctgcgggcgatgctcgtgaggaatcttctg
ctgaagaaacgcgacacgcggaagacgtttatggaggtcgttctacccctctttatcctc
ggggccttgatcgtggtgaaggtcatgatacccaatccaaactttcccgcgattacgaca
cagaggcacgaagggaatgtattcgaattattcaatggctacaaaaataatacgatcgcc
gtggtgcccaattctacggaaaccctcaccttcttaagctccatgaataccctctggctc
tctttatgggattatcccggtaagcttcccttaaacttcatggtgtttgacacgaaggat
gatctgcaagcagcgtattggagagatccttacagcatacctctggcagttatcttcgag
gacccccaaccgatatcacagcgacttatatatgaaattaggacgaatccttcatacact
ttgccgccaccgccaaccaaattgtattctgctccgatcagttgtcgaaagaataaaact
ggtcactggatggacgacattttatcgataaaaaccggtgaatcttgtcccgttaacaat
tacttgcattctggcttcttggctctgcaaatgataacggatatcacaaagataaaattg
gaaaattctgacgtgacaataccggatattaaactcataatgtttcctaaagagccgtat
accgctgactggatgctggccttcagagttgttattccgctttacatggtcttggctctc
tcgcaatttatcacttatcttctgatcctaatagttggcgagaaggaaaataagattaaa
gagggaatgaagatgatgggcttaaatgattctgtgttttggttgtcttggttcatcatc
tacagcattttcgtctttttgctctctgccgttggagtagtattgctcttcaccctgcaa
atgtttcaacacacacattttctgccgatatttcttttagtggttctgtacagtttctcc
gtgattatgttcgcctttatgatcacaccattcttcgataagtcgcgcacggctggcgtt
ttaggaaactttgctgtcacgatattgagcttgatgtacttcatccaagtatttgtgagt
gattccagctcagttacgtattggttggtttctctgatgagcccaaccgcagtcgcttta
gcgatggataaggctctggtgttggatctgcaaggcgagggagtgaattttgacaacctc
tggtctggtccagggatacctttcggtggcagtcttatcatgatgagtctagatatcatt
ctgtacggctatctggcctattatcttgactccgtgataccaagtgagcatggaacaaag
aaaccaccttggttttgcttcttacctggattttggtgtaaaaaaaaggttcaaagggtg
ccgtcgtcgaatggcgaatcgaattcgttcgttccgggcgaggaggcgaatcgcgatgtg
gagccggtggtgcgcgagatgaaaggccgcgaagcgatcagaatagccgatctttacaaa
tcgttccacaagtgcaagcgtccagagatcaaggcggtgaacggcatcaatctaactatt
tacgaaggtcagattaccgccatcctcggtcacaacggcgccggcaagactacccttttc
aacattctcacgggcctgaccgcacctacatctggtaccgccctcatattcggttatgat
gtgcgcgattccaacgatatgcgagcaatacggagcatgacggggatctgcccgcaacat
gacatcctattcgacctgttgacaccgcgcgagcacctcgagttcttcgccgcggtacgt
ggcattccacgtccgatgatacgacatgaggtgaagaaaactctgaaagatatcgatcta
gtcgaaaaggcggacaccttcgcccgatacctaagtggtggacagaaaaggaagttgtct
gtgggaattgctatcatcggcgatcccaaaatcattatcctcgatgagcctaccgccggg
gtggatccttattcaaggagacagttgtggtccctcctgcagtcaaggcggcatggaaaa
gtaattctgttgacgactcacttcatggacgaggcagacatactcgctgatagaaaggca
gtaatcagcaggggaaaactcaggtgttgcggaagctccctgtttttaaagaacaaattc
ggcattggataccatttaacattagtcttagagggtaatgccagagaacacgctatcagt
cggttagtaatgtcacacgtgagcaaagcggagaaggcgagacgtcatggtcgggaattg
agctttattctacctcacaactcagtggagaactttgcgccccttttctctgccatcgaa
cacgagatcaagactcgttcaagcaggctcggcatcagtagctatggcgtgtcaatgacc
accctagaagaggtgttcctgcatctggaaaaagatgaggaaaccgagtgcacaatggac
aatttgtcgaaaaagatggtgcgtaatcgcgcgctaagccgatcgctttcgttgcagtct
aagagcacatcatatcagagcttgcagaacgaaggggtaaccgtacagaacgatggtcaa
ggaaaagcaaacgatttgccggacggcgtccataatgatcggaatccacctgtgctcggt
ctcggcctagatcccatcaagattcggcctaatttctgtcaaactctttacgctatgtta
cgtataagagtgctcagactcatcagaaaccttcaactactgtacttcacaatcatcatg
ccacttgctctgatagtgcttggtctctacctgaacagcatcgggacggttgaggtcaag
atggagtcgctaaaacttaatagccatacatacaacgaaaccgggatcctttacctgaat
aataccgatcacgacgttacccagttggtagacagcgtatctcaagacgcgaagcacatc
gaagaatacgatggcaatttcgcaaatttaatgaatatcgcgccgcatatagccgctttc
aacattaacgattataatttgaaacctccgcgactcaacctgactgtcacatacaacgat
acgatgcagcattcccttccgatattgataaacattctttcgaacgcttattatagattg
atcttgggcaagaacgaagtctatacgccgatcgaagtctatacacacccctttcaacaa
acttcgcaaccccaacaatttaatgtcggcacggccagttgtgctctccttcttggcatg
gttttcattttattaccgattactttagcggtagacatggtttacgatcgcgagatcaaa
gcgaagaatcagcttcgcgtgaatggcctgtcgttctccatgtattttcttagctacttc
attgtgctactcggcctgatgactttcatctgtctgtgcatcctcggcatcatattcctc
ttcgatgtgccttcgctacgggaaataccagccatcatcacccttggcattctcatcatg
ctctactgcccatcgtctatccttttctctacatgtctcagttacatcttcgacaaggtg
gactccgcgcaaagcatgttaccgaacatcgcaaccttcttcgggttgctaccgttcgta
ttcgtcatgatcctcgatatgaaaggactcggtgggtcagcttcgttcgcgttgcacgtg
gccttttccctattgaacagcatgtacgtgccatatgcggcggtgtactacgtggatcgc
gttcatttgatgtgttccatcaacgccgcctgccactatcttgccatgtctgattacttc
accatggagatcatgtcgctggcttttggtgcgctgctgcaatgtccgatttggttcttc
gtgctgctcctgctagacatcaacaagagtggtggcaacgtcagcgatatgtttaaacac
tactttctgcatgatggtgattccattcgtgaagaaattatggaaaattcagatatcggc
gaacacgaggacacggatgtgaaaggcgagcgacagaaggttttcaattttgtcgtttca
ccagccctcggtcaagagccgccgctagtattacttcaaaatctccgaaaggagtaccga
ccaaaagagtcaggctgctcatgctgctgctcaaagcgcgaggacgagcggaacatcgct
gtgcgaaatctctcactagcggtggaaccgggcgaagttctcggcttattgggccacaac
ggcgccggtaagaccacgacgatgaagatcatcatcgctgaagaggcaccgacgaagggc
agggtgcagatcagcggcctcaacatcaacacccacatgacggaggctttccgccagatg
ggttactgtccccagcacgacgctcaatggaagaacattaccgtaagagagcatctggaa
tgctacgccgcgattcgcggggttccatggagtgaagtcgatagaatcgtggatctgtat
ttgtccggtctgcagattcatgaacacgccgacaagcaaagccaagaatgttccggtgga
actaaaagaaaacttagttttgcaatggcaatggtcggtggacccaaagtgattctcatg
gatgaaccaagcacaggcatggatcctaggtcgaaaagattcctatgggatacgattctc
gctagtttccagggtggtaggggtgttatattaactactcactccatggaggaagccgac
gcgctatgttcaagagtcggcataatggtgaagggacaactgagatgcatcggttcgact
cagcatttaaagaatctttacggtgctggctacaccctagagatgaagctgctgggcggc
gactgcacgccgacgactccttctggcgacaggatcgccggcttaaaggaattcgtcgcc
ggcctcttccccgacgccactctggaggagagcttcgccgaccgactagtctttgccgtg
ccccaacacgctgtgaactcgctggctgagtgcttcacacaattggagaaagccaagctt
gaactggatatagaagaatacagctttagtcaaactactctggaacaggtgttccttaag
ttctcgcattag
DBGET
integrated database retrieval system
