Solenopsis invicta (red fire ant): 105195039
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Entry
105195039 CDS
T03916
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49 isoform X1
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soc03009
]
105195039
Enzymes [BR:
soc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105195039
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
90S particles
Helicases
105195039
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
105195039
NCBI-ProteinID:
XP_011158542
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Position
3:complement(16310265..16312707)
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AA seq
452 aa
AA seq
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MNEEVKDFLHLKLNSWLLAQCKSMGLKKPTPIQENCIPRILMGEDCIGCAKTGSGKTLAF
ALPILQKLCEDPYGIFALVLTPTRELAFQIADQFAAIGKVINLKKCVIVGGMDMMIQGLE
LSKRPHIVVATPGRLADHLDSCNTFSLQKIKFLVLDEADRLLGGHFDKQLKKIFAVLPKQ
KQILFFSATMTDTLDKVKKMACNKVFTWQEKDDAGIATVKELDQRYVLCPKDVLDSYLVE
VIRTFRTTNKNGCIMIFTDTCKNCQLLSMTLNDVGFTNVALHAMLKQKERLVALNKFKSN
HIQILIATNVAARGLDIPAVQLVVNHVIPNVPKEYIHRVGRTARAGENGMAISLITPHDI
KLLHAIEDAIGTKLTEYKVDDKEIVTILTQISVAKREAEIKLDETDFYEKKMINKQKKLI
LEEEEGQEPDEVNIAEEERKQPRKKRKVEIKV
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagaagttaaagatttcttacatttgaaattgaattcttggcttctcgcgcaa
tgcaaatctatgggattaaaaaaaccgactccaattcaggagaattgcattcctcgaata
ctgatgggtgaagattgcataggctgtgccaaaacaggcagtggtaagactctggcgttt
gccctgcccattttgcaaaaattatgcgaggatccgtacggtatatttgctcttgtattg
acaccaacgagggaactagcttttcagattgcagatcaatttgctgctattggtaaggtt
attaatttgaaaaaatgtgtaattgttggtggcatggatatgatgatacaaggattagaa
ttgtcaaaacggccgcatatagttgtagctacaccaggtcgactggcagatcatttagac
agctgcaatacattttccttgcaaaagatcaaatttttagtgttggacgaagctgatagg
cttcttggtggccattttgacaaacagctgaagaaaatatttgctgtattacctaagcaa
aaacaaatattgttcttcagcgccacgatgacagacactcttgataaagtaaagaaaatg
gcttgcaataaggttttcacatggcaagagaaagatgacgctggtattgccactgtaaag
gaactagatcaacgttatgtgttgtgtcctaaagatgtacttgattcgtatttagtagaa
gtgattagaacatttcgcaccactaataaaaatggctgtatcatgatattcacggacact
tgcaaaaactgtcaattattatcgatgacattgaatgatgttggatttacgaacgtggct
cttcatgcaatgctaaagcaaaaggaacgtttagtagcgctgaataagttcaagtcaaat
catatacagatattaatcgctaccaacgttgcagccagaggcctggatattcctgcagta
caattagtagttaatcacgtaataccaaatgtaccaaaggagtatattcatagagtcggt
agaacagctcgcgcaggtgaaaacggtatggcgataagcttgataactccacacgatatt
aaattattgcacgcgatcgaagatgccataggtactaaattaacagaatataaggtagat
gacaaggaaatcgttactatcttgacgcaaatatcggtggcaaaacgggaagcagaaatc
aaattagatgagactgatttttacgaaaagaaaatgatcaacaaacaaaaaaagttaatc
ttagaagaagaagaaggtcaagagccagatgaagtaaatattgccgaggaggagagaaaa
caacccaggaaaaaaagaaaagttgaaatcaaagtctga
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