Solenopsis invicta (red fire ant): 105195162
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Entry
105195162 CDS
T03916
Name
(RefSeq) LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5
KO
K09372
LIM homeobox protein 1
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
105195162
Transcription factors [BR:
soc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
105195162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
105195162
NCBI-ProteinID:
XP_011158738
LinkDB
All DBs
Position
5:21786993..21834737
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AA seq
531 aa
AA seq
DB search
MGGRERRRSDNGRTRDEEEMEEYLEETPDDDEALANGRRGLAMLLSCAGCEKPIMDQYLL
NVLDRAWHVECVRCFDCRAALQDKCFSREAKLFCRNDFFRRYGTKCGGCLQGINPQDLVR
KARDKVFHLNCFTCLVCRKQMSTGEELYVLDDNKFVCKQDYLSGKPLPDTHHVHGHHEPS
NLSAGGDSLMGSGSEDEDEDGSAHHHHHDSAVRGAHLGTHNIGAGGPGDQTVGHGGELPL
GGDPCKQEDSEDQGSLDGDPETRDSQTENKSPDGGAGGGSGDGSAGSKRRGPRTTIKAKQ
LEILKTAFSSTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERRLKQLTSMGRNPFFG
GSRKMRGFPLNLNPGALGGEDGPPPGFPYFGPDKFEFGYGGPVAFHHEFFGAHPPPHPHG
PHFAGTGNPGLDPASLAGMAAAVAVAGEYPPPGAGGGPPEFLTGPPGXGPPAPTGGSPGE
FLAPSGGGQGNPSGGGGGNGGGPGGGGGGGGGVAGGGFLEPHQMQSEGLAW
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgggagggcgagaaaggaggaggagcgacaacggaaggacgagagatgaggaggagatg
gaggagtatcttgaggagacaccggacgacgacgaagctctcgcgaatgggagacgcggt
ctggcgatgctcctgtcatgtgcaggatgcgagaaaccgataatggatcagtacctgctg
aacgttttggaccgtgcatggcacgtcgagtgcgtgcgctgtttcgactgcagagccgcg
ttgcaggacaagtgcttctccagggaggcgaagctcttctgcaggaacgacttcttcagg
cgatacggcaccaagtgcggcggctgtctccaagggataaacccgcaggaccttgtgagg
aaagcgagggacaaggttttccacctgaattgcttcacctgcctggtgtgtcggaagcag
atgagcaccggcgaggagctctacgtcctggacgacaacaaattcgtttgcaagcaggac
tacctgtcgggcaaaccgctgccggacacgcatcacgtgcacggtcaccacgaaccgtcc
aacctgtcggcaggcggagactcgctgatgggctcgggatcggaagacgaggacgaagac
ggtagtgcccaccatcaccatcacgactcggccgttcgcggcgctcatctcgggacccac
aacattggtgcgggtggtcccggcgaccagaccgtcggccacggcggcgaactacctctc
ggtggcgatccctgcaagcaggaggactccgaggatcaaggttccctggacggcgatccc
gaaacgagggacagtcagacggaaaacaagagcccagacggcggcgccggcggtggcagc
ggcgatggcagcgccggctcgaagcgacgcggcccgcggaccactataaaggcgaaacaa
ttggagatcctgaaaacggccttttcgtcgaccccgaagcccaccaggcacatcagggaa
cagttggcgaaagagaccggcttgcccatgagagtcatacaggtctggtttcaaaacaag
aggagcaaggagcgcaggctgaagcagctgacgtcgatgggcaggaaccccttcttcggg
ggctcgcgcaagatgcgcggattcccgctgaacctgaacccgggcgccctcggtggcgag
gacggaccaccgcccggtttcccgtatttcggcccggacaagttcgaattcggctacggc
ggcccggtggccttccatcacgagttcttcggcgcgcatccgcccccgcatccgcatgga
ccgcattttgccggtacgggaaatccaggcctggacccggccagtttagcgggcatggca
gccgcagtggcggtggcaggggaatacccacctccgggcgcggggggcggccctccggaa
tttctcacggggcccccgggcnaggggccccctgcgcccaccggcggcagccccggagag
ttcctggcaccttcaggtggagggcaaggtaatccgagcggcggcggcggcggaaacggc
ggcggcccgggtggcggcggcggcggtggcggcggcgtcgcgggcggcgggttcctggag
ccgcaccagatgcagagcgaagggctcgcctggtag
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