Solenopsis invicta (red fire ant): 105195436
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Entry
105195436 CDS
T03916
Name
(RefSeq) protein strawberry notch isoform X1
KO
K26273
protein strawberry notch
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soc03036
]
105195436
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105195436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
105195436
NCBI-ProteinID:
XP_011159128
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Position
15:complement(9598811..9609192)
Genome browser
AA seq
1365 aa
AA seq
DB search
MATKKYDDGVSDDSESDFDDEEDPDKIEVPGGGKDLATAAVIGSIKEEKPVDLPPISLDK
TPGALNELNQKFGKIPEGLVTKTATPGYEMVRVGGSQGTPPGGFVGASQLNQLNQLATGG
YPGFPPGLSLAGFNPAAFLQSSMDMNALMGSFMGMPGMNMGVNPFVQFLNQSGIHPNWSG
LSGKAVSQMWMNSSDPTKLMQPNIPEEEEVDDEDMGVAETYADYMPTKLKLGRKHPDPVV
ETASLSSVEPTDVWYKLSIPEETIRSGALSALQLESITYTSQQHEHLLPDGTRAGFLIGD
GAGVGKGRTIAGIIFENYLKGRKRAIWVSVSNDLKYDAERDLKDIGASKIEVHPLNKFKY
AKISSAVNGNVKKGVIFSTYSALIGESSQSGGKYKSRLKQLLQWCGEDFDGLIIFDECHR
AKNLCPTGSSKPTKTGLTVLELQNKLPKARVVYASATGASEPRNMAYMVRLGMWGEGTPF
PEFNGFITAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVAFKIEEVPLSKDFTKVYDH
SVRLWVEAMQRFQEAAELIDAENRMKKTMWGQFWSSHQRFFKYLCIAAKVKHAVAVAREA
VKCGKCVVIGLQSTGEARTLEQLERDDGELSDFVSTAKGVLQTLVEKHFPAPDRNRIQRL
LGLEPPKFKLEDDDLDGAGGSAGGSKRKPIRQAAQRATKKVRSWSSEEEISDEERNGAHS
SGSEYKLSGTESEDDHHTDEESNVSSDFNPFFSDSDSDVDPWDRRKNKKGKKQKKPAKKR
LSTQDKIQSMLVHKQSSNKNKRNGDTAMSGGPMSAMGGSMPHNQAPPRDAIERACSMKEE
LLSQIEALGERLPPNTLDQLIDELGGPENVAEMTGRKGRVVQREDGGIEYESRSEVDVPL
ETLNLTEKQRFMDGEKTVAIISEAASSGISLQSDRRARNQMRRVHITLELPWSADRAIQQ
FGRTHRSNQVNAPEYLFLISDLAGERRFASIVAKRLESLGALTHGDRRATETRDLSQFNI
DNKYGRAALEATMKTIMGYEPPLVPPPQDYHGDFFKDVADALVGVGLICNSESTPGVLTL
DKDYNNMSKFLNRILGMPVDLQNRLFKYFTDTLNAIVTQAKKTGRFDMGILDLGTSGENV
RRVRLYRFLRKHATGKAPTELHIVHVERGMSWSEVTEKASEFTGSKEGFYLSHQIRNGKQ
TAILAIMVDSGKKKSDSKKDQYMVYRPNTGLQLRQETLGELEKKYKKVSAEEAEPHWTQQ
YEASVTTCSHAYWSGNCKNATVGIDCEVGLRRRSYNVLAGSVLSVWSRVESVLAARSGHN
SKMQVVRLRTDEGLKIVGTLIPKSCMEPLRQALSSDAEKTEEQTF
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaaaaagtatgatgacggcgtaagcgatgatagtgaaagtgactttgatgat
gaagaggatccagataaaattgaagtgcctggtggaggcaaagatcttgcaactgctgct
gtgattggaagtatcaaagaagagaagcctgtagatctgccaccgatttctttggataaa
acgccaggagcattaaatgaattgaaccaaaaatttggcaaaatacctgaaggattagta
acaaagactgcaacaccaggttatgaaatggtgcgtgttgggggttctcaaggtactcca
ccaggaggttttgttggtgcaagtcaattgaatcaactgaatcagttagcaactggtgga
tatcctggttttccaccaggattatctcttgcaggattcaatcctgctgctttccttcaa
tcaagtatggacatgaatgctttgatgggtagttttatgggtatgcctgggatgaatatg
ggagttaatcctttcgttcagtttcttaatcaaagtggaattcatcccaattggtcagga
ctttcaggaaaggcagtgtcacaaatgtggatgaattcaagtgatccaacaaaattgatg
cagccaaatattccagaagaggaagaggtagatgatgaagatatgggtgttgccgagact
tatgccgattacatgccaacgaaactcaaacttggacgaaagcatccggatccggttgtc
gaaacagcgtctctgtcaagtgttgaaccgacagatgtttggtacaagctctctatacca
gaggagacgatacgatctggcgcgctctccgccctccaactcgaatctataacgtatact
tctcagcaacatgagcacctcttacccgatggcacacgcgctggatttctgatcggtgat
ggcgcaggtgttggtaaaggcagaactatagctggtattatattcgaaaattacttgaaa
ggtagaaaacgtgccatctgggtgtcagtgtcaaacgacctcaagtacgatgccgaacgc
gatttgaaggacataggtgcatcgaaaatagaagtacaccctttgaataaatttaaatac
gcgaaaatctcgtcagctgtgaacggtaatgtgaaaaaaggtgtgatcttcagtacatat
tccgcattaattggtgaatcatcacagagtggtgggaaatataaaagccgattgaaacag
ctgttgcaatggtgtggtgaggattttgatggtctgataattttcgatgagtgtcaccgg
gcaaagaatttatgccctaccggaagttcaaagcctactaaaacaggattaacggtcttg
gaactgcaaaataagcttccaaaggctagagtcgtatatgccagcgcaaccggcgcttct
gaacctcgcaacatggcctacatggtacgactaggtatgtggggtgagggtacacctttc
ccggaattcaatggttttatcactgctgtggaaaaacgcggtgtcggcgcgatggagatc
gtagcgatggacatgaagttacgcggcatgtatatcgctcgccaattgagttttcacggt
gttgccttcaaaatcgaggaagtacctctttccaaggacttcacgaaggtttatgatcat
tcagtacgattgtgggtggaagcgatgcagaggtttcaagaagcggcagagctaatagac
gcggaaaatcgtatgaagaaaacaatgtggggtcaattttggtcgtcacatcaacgcttt
ttcaaatatctttgtatcgccgcgaaggtgaagcacgcggtggctgtggcacgcgaggcg
gtcaaatgtggcaagtgcgtggtgatcggtctacagtccactggcgaagcacgcactttg
gagcagttggaacgtgacgatggcgagctcagcgacttcgtttctactgcaaagggagtt
ctgcaaacgctagtagaaaaacactttccagcgccagatcgtaatcgcatccagcgtctt
cttggtttagaaccgccaaaattcaaattagaggatgacgatctagatggtgctggtggt
tctgcaggcggcagcaagaggaagccgattcggcaagcggcgcaacgtgcgacgaaaaaa
gtgcgctcttggtcatcggaagaggaaatatcggacgaagagagaaacggcgctcacagt
tctggttcagagtacaaattaagcggtaccgaaagcgaggacgatcatcacacggacgag
gagagcaacgtcagttccgatttcaatccgttcttcagcgatagcgattctgacgttgat
ccctgggacagacgaaagaataaaaaaggcaagaagcagaaaaaacccgcgaagaaacgt
ttgagcacgcaggacaaaatccaatcgatgctagtgcataagcagtctagcaacaaaaat
aaacgtaatggcgatacggcgatgagcggcggacctatgagcgccatgggtggaagtatg
cctcataatcaagcaccacctagagatgctattgaaagagcttgcagcatgaaggaggaa
ttactatcgcaaatagaagctcttggcgagcgattaccgccaaatacgctagaccaattg
atagacgaactcggcggaccagaaaatgtcgcggaaatgacgggtagaaagggtcgcgtt
gtgcaaagagaagatggtggaatagaatacgaatctaggtcagaggtggacgttccttta
gaaactctcaacttaacagaaaagcagaggtttatggatggagagaagactgtggcaata
atttccgaagcggccagtagcggtatatcgttacagagcgacaggcgagctagaaatcaa
atgcgacgtgtgcatatcacgctcgaattgccgtggagcgcggatagagcgatacaacaa
tttggacgaacacatcgatcaaatcaagtcaacgcgccagagtacctatttcttatatcg
gacctggctggagaaaggcgatttgcctcgatcgtcgcaaagcggctagaaagtctgggt
gcgttaacgcacggcgatcgtcgcgcaacggagactcgtgatctgtcgcagttcaatatt
gacaacaaatacggtcgcgcggctctagaagcgacaatgaaaactataatgggatacgag
ccgccattagtaccaccgcctcaggattatcacggtgattttttcaaggatgtggcggat
gcgctggtaggcgtaggtttgatttgtaatagcgaaagtacgcccggtgtactcacgctc
gacaaggactacaacaatatgtcgaagttcctgaatcgcattctcgggatgccagtcgat
cttcaaaatcgtctgttcaaatacttcaccgatacactcaacgccattgtgacgcaggcc
aagaagaccggtcgtttcgacatgggtattcttgatcttggtacatcgggcgagaacgtt
cgcagagtgcgactttaccggtttctgcgaaaacacgcaactggcaaggcgccaactgaa
ctgcatattgttcacgtcgagcgcggtatgagctggtccgaggtcacggagaaggcctcg
gagtttaccgggtccaaggaaggtttttatctgagccatcagatccgcaatggcaaacag
acggctattctcgcgatcatggtggacagcggcaagaaaaaatccgacagcaagaaggat
cagtacatggtgtacaggcccaacacaggtctgcagttacgacaagagactctaggtgaa
ttagaaaagaagtataagaaggtgagcgcagaagaggcggagccgcattggacacaacag
tatgaggcctccgtgaccacgtgttcgcacgcgtactggagcggtaattgtaaaaacgcc
actgtcggtatagactgcgaggttgggctaagaagacgttcctataatgtattagccggt
tcagttctgagcgtttggagccgcgtcgaaagcgtactcgctgcgcgatctggacataac
tctaagatgcaagtagtacgactgcgtacggatgaagggttgaagatcgttgggacgctt
atcccaaaatcttgcatggagccattacgtcaagcactctcctccgacgcagaaaagaca
gaagaacagacgttttga
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