Solenopsis invicta (red fire ant): 105195688
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Entry
105195688 CDS
T03916
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X2
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105195688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soc04131
]
105195688
Membrane trafficking [BR:
soc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
105195688
Protein recycling
Other Rab GTPase associated proteins
105195688
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
DExH14_plug
Motif
Other DBs
NCBI-GeneID:
105195688
NCBI-ProteinID:
XP_011159506
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All DBs
Position
4:2744046..2747426
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AA seq
620 aa
AA seq
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MYSTKTPTLRIDEADLKCRNGCGFYGNAEWEGYCSKCHREHLQKRRAQAERVSHTQTSDT
DNVNQSTSIGSHKSYEEKKVQQEKKYKLLNISFRKPVAKVQGYQEMCHELLKDNPDLEKV
KAENRELLLYIAKTPVEKDVRKCIHSFVVDILQNKDVKRIEELSEITQNFYHVFGKRLEN
STKYADISSDIKEKLLDYVERYAMTLLYRILFCPPFTTDEEKDLAIQKRIRQLNWVSGKN
LECRIHETSSDVRELVYTSITDLLNMDSAKAPQEKLACVIHCCRNIFLLLQQSVDGPASA
DEFLPALIFIVLKANPARLKSNINFITRFCNASRLMTGEGGYYFTNLCCAVSFIENLTAE
SLNMAEKDFNAYMSGECVPANTWESALMICESLHFMCEDITLLDDLQAKNTDIIKQTEEL
KNKMMDFKEKIREDVSKVIERTPLLISHSQRVPTNLDSDDIESYQLPPPIIPQIYPHSID
NMNGGVMTDLSGDLMRTSLVEDSVTPSPTFDFPSFIGDDSLDASKCEDETSLISLDTQSD
LASGDTQLFNKKHMTDSLLDECPTPEANLPPVLKPISSEDYHGFTIQGSNIPTIPCSTGD
SSLTPADLDSDNYSAYYQNM
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtactcgacgaagacaccgactctgcggatcgacgaagccgatctcaagtgcaggaat
ggctgtgggttctacggcaacgcggaatgggaaggctactgcagcaaatgccatcgggaa
catctgcagaaacgacgggctcaagcggagcgtgtgtcccacacgcagacctcggataca
gacaatgtcaaccagtcaacaagtattggcagccataagagctatgaggagaagaaagta
caacaggagaaaaagtacaaattgttgaacatttcattcaggaaacctgttgctaaagtt
caaggatatcaggaaatgtgtcatgagttgctgaaggacaatccggatcttgaaaaggtt
aaggcagaaaatcgagagttgttgttatacatagctaagacgccagtagagaaggatgtg
agaaaatgcatacattcattcgtggttgacatactccaaaacaaagatgttaagaggata
gaggaactatcagagataacgcaaaacttttatcatgtgtttggaaagcgcctagagaac
agcactaaatatgcagatatatcatcagatattaaagagaagttattagactatgtggag
aggtatgcaatgactttattgtacagaattctcttttgtcctccattcacgacagatgaa
gagaaagatttggcaatacagaaaaggatacggcagttaaattgggttagtggcaagaat
ttggaatgtaggattcacgagacaagctcggatgttagagaactcgtttatacatctatc
actgatcttttaaatatggattctgctaaagcgccccaagagaaactggcgtgcgttatt
cattgttgtagaaatatattcttattgctgcaacagtcggtcgacggaccagcgtccgcc
gacgaatttcttcctgcgcttatatttatcgtcttaaaggctaatccagcacgtctcaaa
agcaatataaattttatcacgaggttttgcaacgccagcagattaatgactggagaagga
ggatattacttcacaaatttgtgttgcgcggtgtcgttcatcgaaaacttaactgcggaa
tccctgaatatggctgagaaggattttaatgcatacatgtcaggagaatgcgttccagct
aatacatgggaatctgctcttatgatatgcgaaagtttacactttatgtgcgaagacata
actttattggatgacttgcaagcaaaaaataccgacattataaagcaaacggaagaactg
aagaacaaaatgatggatttcaaagagaagattagagaggatgtgagtaaagtgattgag
aggacgccgctgctaatatctcacagtcaaagagtgcctacgaatttagatagtgacgac
attgagagttatcagttaccaccgccgattatcccacagatatatccgcattccatcgat
aacatgaatggcggcgtgatgacggatttgtcgggtgatttaatgaggacgtcattggtg
gaagattccgtaacaccgtctccaacgtttgacttcccatctttcatcggcgacgatagt
ttggatgccagcaaatgcgaggacgagactagtcttattagcttagatactcaatctgat
cttgcgtctggcgatacccagctctttaataagaaacatatgacagatagcttgttagac
gagtgtcccacacccgaggcgaatctaccgcccgttttgaaacctattagctcggaagat
tatcacggcttcacgattcaaggatcgaatataccaacaatcccatgcagcacaggcgat
tcatccttaactccagcagacttagattcggataattattccgcttactaccaaaacatg
tag
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