Solenopsis invicta (red fire ant): 105195794
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Entry
105195794 CDS
T03916
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105195794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105195794
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105195794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105195794
NCBI-ProteinID:
XP_011159705
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All DBs
Position
4:199723..201029
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AA seq
220 aa
AA seq
DB search
MTEKATEINCILRPINCEINLLSRSDGSTMFMQGDTTIIVGVNGPLETRSQKMAYDRASI
EVTYTPLKGPAKIDDRLIETYIKETCESAILVSFHPNTMVCINLQEMQDSGGLLACAINA
SCLALINSGLSLKFTIAAVSCMIEKETGQVIIDPDSSQLQNAKAEFTYAFDSINKDLVCC
HSVGRFSQSEFLASVDKCRQVSKYVFDYYREVTKKYANIV
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaagctactgaaattaattgcatactacgaccaataaattgcgaaattaat
ttactatcaagatctgatggctctacaatgtttatgcaaggtgatactacaattattgta
ggtgtaaatgggcctttagagacaagaagccaaaaaatggcatatgacagagcttctatt
gaagttacttatacgcctcttaaagggccagccaagatagatgatagattaattgaaaca
tatataaaagagacatgtgaatctgctatattagtttcatttcaccctaatacaatggtg
tgtattaatttgcaagagatgcaagattctggtggactactagcatgtgctattaatgct
tcatgtttagcgctaattaattcaggactttccttgaaattcactattgcagctgtaagt
tgcatgatagaaaaagaaacaggacaagtaatcatagatcctgacagttcacaattacaa
aatgcaaaggcagaatttacatatgcatttgacagtattaacaaggatcttgtatgctgt
catagcgttggccgtttctctcaaagtgagttcttagcttccgtggataagtgtagacaa
gtcagtaaatatgtgtttgattattatagagaagtaacaaaaaagtatgcaaatattgta
taa
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