Solenopsis invicta (red fire ant): 105195844
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Entry
105195844 CDS
T03916
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105195844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soc04121
]
105195844
Enzymes [BR:
soc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105195844
Ubiquitin system [BR:
soc04121
]
Ubiquitin ligases (E3)
HECT type E3
105195844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
ARM_ARMC5
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
105195844
NCBI-ProteinID:
XP_011159754
LinkDB
All DBs
Position
4:complement(7849052..7877694)
Genome browser
AA seq
2081 aa
AA seq
DB search
MADQQDQLSSGGSVEKASASADTSKIRGKGSSGGSSGYRKRQNTGAISDSVEEKRRRQIT
GDPQTSQVDGNTAHTHLIDSSKGEGRIRGERRNHGAGLESYPDTDWRSHHKIHQASYSSG
SSARVRSAARTNLPELNLTPTDCVASRTRSRTPQNNPQALVQATSSYDLSLPSGYGSRKT
STYSNVVASSSTTLITSHPSTSRGRGGQRMSECLEGFVSAVKALFPISTQTYHQEDSKSH
GGATCSATSSSSTSSQVLGVKSSIRVGNAASNSVESGGGALAHDGAGTSGIASTANPPVS
AAVSANPAHPHSTHKHLLRSRAKASGEQPKELPSSNKTSGKHHKKDTTTGSCSSSRHRSS
SRVRKPVVESGSGGLGSVMSGNDSISATSVSSSIPSNQLVSTTGEEESASTATSATASGG
PSGMSGTTGDSESDDGEVGRLQALLEARGLPPHVFGALGPRMQHLLNRSMGASSAAKAQQ
LLAGLQAVEDEGEQLQAVMNMGEILVMGNEDTLTGFPVKQVVAALINLLGIEHNFAIMTH
ACRALTYMMEALPRSSTVVVDAVPVFLQKLESIECMDVAEQCLTALAMLSRRHSKTILHA
GGVSACLKFVDFFNITAQRAALTITANCCQNLHPDDFHLVVDSLPLLTSRLTNQDKKSVE
CVCQAFSRLVDSFQHDPVMLHKIINAELLQNLQQLLMITPPVNSTNNFITVLRMLSVISN
RCPDLAQLLLQQNIAFTLSYLLTGSLEVKTEDVELVPRTPQEWFEITCLIEELMPPLPTD
GIFSVNSLLERTSNQQETVQWEWRDERQCSHPFSTIDSRIIEMAFQNGEDEICLTSLGRT
YTIDLTVMKQINEDIGMARSIFRRVNANPTEGKSPTCSSSYYNFDCSMDVVPPVIETNEW
LVSFIRTLFSVLYEVYSSSAGPAVKCKCLRALLRMVYYASTDLLKDVLKNQVVSSHIAGM
LASQDLRIVIGALQMASILMKRLPQVFGVHFHREGVLHQVRQLADPEVPLGVSPPKCPSG
TSLPSPQPGPSNTPLSSTTMLSSSSATSPVVSPSSNGNILFGTIASSCQYKPNISASLEP
HRTELNNSIEESAPQSAHLRIGDVLKKKRQNKKGRFSRLGGATTPQQTQQPESMFTGFTP
KNNRFLGNLNPAKWGRKSSSSSTSNDKRDSSSSTNLSKPPSNPSLTGGNRDKAKAWVREQ
AAQFLTRYQDDAPCSHPALTVLARLTAAIQRLQSNELDEMLSALTELRDIVLESDISPFE
MNYSGLIKALLNYLTTTDAPGNRYDRLRMFWKLFAESTMQQNNDIMDLNPGAFGALVTKL
NSCVAQLEQFPVKVHDLPAGSGAGRGGTSALKFFNTHQLKCNLQRHPDCNNLKQWKGGTV
KIDPLALVQAIERYLMVRGYGRIRDADSMVSDDDNSEDDIDDTLAAVVISQGPPKHKLQF
LIGDVVLPFNMTVYQAVRQFGCSGVDHSEAEADSEPPLGHDAVWVQTHTIYYRPVPEEDA
ATSPKLGSSSQGNSRKGKGKSTKISSKRKEDSLWLEGTVPLQHCPLAPYLSPTLPPSVTI
TDASLDGLCLLRLLHALNRHWGILFPHLKSMSLLSPQDFINNKIAAKASRQLQDPLVIMT
GNLPSWLQQIASVCPFLFPFETRQLLLYATSFDRDRALQRLLDSAPELSGSDSQERVTPR
LERRKRTISRTDILKQAEQVIQDLASNKALLEVQYVNEVGTGLGPTLEFYALVSKELQRA
DLDLWNGSSNPTENGYVNSSHGLFPTPIPWNTKVSHLAKLKTKFKFLGKFMAKAIYDSRM
LDLPFSLTFYRWLLGEEHTLTLADLAYVCPDVYRTLNKLQEVVRKKEAMEKDQTLRSHEK
AQLIEALDLDSCPISELGLVFELPGYENIELRKGGSEIPVTIHNLDQYIKLVVHWFLYEG
VFRQMEAFREGFESVFPPSQLRLFFPEELEAVFCGHAQTGGQWDVKILAECCRTDHGYTP
DSRAIRFLFEVMAKYNSEEQRQFIQFVTGSPRLPVGGFKSLTPPLTIVRKTFDPSMKTDD
FLPSVMTCVNYLKLPDYTTLEIMREKLRIAAQEGQHSFHLS
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaacaagatcagttgtcatcaggggggtctgtagagaaggccagtgcttca
gcagacacctctaagattagggggaagggctctagtggtggctcgagtggctacagaaaa
cgacagaatactggtgcaatctcggatagcgtggaagagaagaggcgtcgacagattacc
ggcgatccgcaaacatcccaagttgacggtaacacagcgcacacgcacttgattgattct
tccaagggagagggcagaatcaggggcgaacgacgaaatcatggagctggcttagaatct
tatccagatacagactggaggtcgcatcataagattcaccaagccagctacagcagtggt
agcagtgcgagggtgcgtagcgcagcaaggacgaatttgccggagttgaatttaacacct
accgattgtgtggcgtcgcggacccgttcccgtacaccgcagaataatcctcaggcatta
gtacaggcaaccagcagttacgacctgtcactgcccagtggatacggtagccggaagaca
agtacctacagcaacgtggtagcgtcatcgagtacgacgttgatcactagtcatccatcc
acatcgagaggaagaggaggccagaggatgagcgaatgtctggaaggatttgtgtctgct
gtcaaagcactttttccaatatcaacacaaacctaccatcaagaagattcaaaatcacac
ggtggtgcgacctgtagcgcaaccagcagcagcagtacgagtagtcaagtcctgggtgtc
aagtccagcatcagagtgggtaacgcagcaagtaactctgtggagagtggtgggggggcg
ttggcacatgacggggcaggcacgagtggcatcgcgtcaactgccaatccacctgtgtct
gccgccgtttctgccaaccctgcacaccctcattctacacacaagcacctgctacgctct
cgcgcgaaagcttctggcgaacagcccaaggaactgccatccagcaacaagacttctgga
aagcatcacaagaaagacactacaacgggttcctgctcgagttccagacatcgctcctca
tcgcgcgtgaggaagccggtggtagaaagcggctccggtggactgggtagtgtaatgtca
ggcaatgactccatcagcgctacatcggtatcatcctccatccccagcaatcagttagtc
tcgaccacaggtgaggaggagtcggcatcaactgcgacatccgccacagccagtggagga
ccatctggaatgtcaggaacgactggtgatagcgagagcgacgatggagaagttggacga
ttacaggctctgttggaagcccgaggattaccgcctcacgtgttcggcgcgttaggaccg
cggatgcaacacttattgaatagaagcatgggtgcaagctctgctgctaaggcgcaacag
ctactagctggtttacaagctgtcgaggacgagggagaacaattgcaagctgtcatgaac
atgggagagattctcgtaatgggcaacgaagacactttgaccggttttcccgtcaagcaa
gtggtcgcagctttaattaatttattgggaatcgagcataattttgcgataatgactcat
gcatgtcgtgctcttacgtatatgatggaggcgctgccacgatcatccaccgttgtggta
gatgcggtgccagtgtttctgcaaaaactcgaatccattgagtgcatggacgtagctgaa
caatgtttgacagcactggccatgttgtcacgcaggcacagcaaaacaattttacatgcg
ggtggggtatcagcctgtttgaaattcgttgatttcttcaacattacggctcaacgtgcg
gcgttaacgattaccgcaaactgctgtcagaatcttcatcctgatgattttcacttggta
gtggatagtctgccattattaaccagcagattaacaaatcaagataagaagagtgtcgag
tgtgtgtgtcaagcattcagtcgattagttgacagtttccaacatgatcccgtgatgctg
cataaaattatcaacgccgaactcttacagaatctgcaacagctgctcatgattacgccg
ccggttaacagcactaacaatttcataactgtattacgaatgctctctgtgatatcgaat
cgctgtcccgatctggcacagttgttgctgcaacaaaatatagctttcacattaagttat
ctcttaactggatctctggaagtcaaaacggaagatgtggagttggtgccgcgtacgccg
caagagtggttcgaaattacgtgtttaatcgaggagcttatgcctccattgccaacagat
ggaatattcagtgtaaatagcttacttgaaaggaccagcaatcaacaggagactgtccag
tgggaatggcgcgatgaaagacagtgttcccatccgttcagtactatagattctagaatt
atcgagatggcgtttcaaaatggcgaagatgagatatgccttacctctttaggacgaact
tacactatagatctgactgtgatgaaacaaattaacgaggatataggaatggcaaggagt
atatttcggagagtgaacgccaatcccactgagggaaagagtccaacttgctcatctagt
tattacaattttgattgcagtatggatgttgtgcctccggtaattgaaacgaacgaatgg
ctagtgtcttttattcgaactttattctctgtactatatgaagtttatagtagctcagcc
gggcctgccgtgaaatgcaaatgcctccgagctcttcttcgtatggtatattatgcttca
actgatttacttaaggacgttttaaagaatcaagtggtttcgtcgcatatagctggtatg
ttagcatcgcaagatttacgtatagttatcggggctcttcaaatggcgagtatcttgatg
aaaagattgccacaagtgtttggggttcattttcatcgtgagggcgtgctacatcaagtt
cgtcaattagcagatcccgaagtacctctcggtgtttcaccacctaagtgcccttctggt
acatcattaccaagcccacagccgggtccgtctaatacaccactttcttccaccacaatg
ttgtcttctagtagtgccacgtctccagttgtctctccatcctcgaacggcaacatattg
tttggcacaatcgcgtcatcatgccagtataaaccaaatatcagtgcttcactggaacca
cacagaacggaattgaacaacagcatagaggaaagcgcaccacaaagtgctcacctgaga
atcggtgacgtgctgaagaagaagcgacagaacaagaagggacgtttctcgagattggga
ggtgccaccacaccacagcaaacgcaacaaccggaatccatgtttaccggatttaccccg
aaaaacaatcgatttttgggcaatctgaatccggcaaaatggggccggaaatcgtcctcg
tctagtactagtaatgacaagagagactccagctcgtccacgaatctgtcgaaaccacca
agcaatccgagcttgactggcggaaatcgggataaagcaaaggcttgggtgcgtgaacaa
gctgcccaattcttgacgagatatcaggatgacgctccttgctcacatcccgccctaacg
gttctcgctcggctgaccgctgcgatacaacgattgcaatcaaatgaattggatgagatg
ttgtcagcactaacggaattacgggacatagttctcgagagcgatatatcgccgtttgaa
atgaattacagtggccttatcaaggctctgttgaactacctcactaccacagatgcaccg
ggcaatcgctatgaccgtcttcgtatgttctggaaattgtttgctgagtctaccatgcaa
caaaataatgatatcatggatcttaatcctggagcgtttggcgctctagtaacaaaattg
aacagttgtgttgcacaactagaacaatttccagtgaaagttcacgatttacctgccggt
tctggtgctggtcgtggcggcaccagtgctctcaaattctttaacacacatcaacttaag
tgtaatcttcaacgacatccggactgtaataacctaaagcagtggaagggcggtactgta
aaaatagatccgcttgcattggtacaggcaattgaacgttatttgatggtacgcggatat
ggcagaatacgggacgctgattcgatggtcagcgatgacgacaatagcgaggatgacatt
gacgatactttggcggcagtcgtgataagccaaggaccgccaaaacataaacttcagttt
ttaatcggcgacgtggtcctacctttcaacatgacggtttatcaagccgtcagacagttc
ggatgctccggagtggatcactccgaggcagaagccgatagtgaaccgccgctcggacac
gatgcggtgtgggtgcaaacccatacgatatactacagacctgtaccggaagaggatgct
gcgacctctccaaagttagggtcgagttcacagggtaatagtaggaagggcaagggaaaa
agtacaaagattagttcgaaaagaaaagaggacagtctctggttggaaggcacggttcca
cttcaacactgtcctctcgcgccatatctatctcccacgttaccaccttcggtgactatt
acggatgcttccctcgacggcttgtgtctgctgcggctcttgcacgctcttaatcgccat
tgggggatattgttccctcatctaaaaagcatgagtctactgtcgcctcaggactttatc
aacaacaagatcgccgcaaaagccagcaggcagctgcaagatcctctggtgatcatgact
ggaaacttaccatcatggttacaacagatagcttctgtctgtccttttctctttccgttt
gagacaagacaactgttgttgtacgcgacatcgttcgatcgtgatagagcgttacagcgc
ctcttggattccgcaccagaactctcgggatcggatagccaggagcgtgttacgccacgt
ttagaacgaagaaagagaactatctcgagaacagacattcttaaacaagcggaacaagtg
attcaagacttagcctctaacaaggccttacttgaagtgcaatacgttaacgaggttggc
accggcctcggtcctactttggaattctacgctctagtctctaaggaactgcaacgcgcc
gatttagacttgtggaacggcagttcgaatcctaccgaaaacggatatgttaattcctcg
cacggactcttcccaacgccaatcccatggaatactaaggtgtcgcatctagcaaaatta
aagaccaagttcaaattccttgggaaattcatggcgaaagcgatatacgactccagaatg
ttggacttgccatttagtttgacgttttaccgctggttattgggagaggagcatactctt
acgttagcagacttggcgtatgtatgtcccgacgtgtatcgcactcttaacaagctccaa
gaggtcgtaagaaagaaggaagctatggagaaggatcagactctacgatcgcatgagaaa
gcgcagttaatagaggctctcgatttagattcgtgcccgatttccgaactgggtctcgtg
ttcgagttgccgggctatgagaatatcgaattgagaaagggcggaagcgaaatacctgtt
actattcacaatctggatcaatatatcaagctggtggttcactggttcttgtatgaagga
gtgttcaggcaaatggaagcttttcgggaaggttttgagtcggtattccctccgtcgcaa
ctgagactgttcttcccggaggagctagaggcggtattttgcggccacgcgcaaaccggc
ggacaatgggatgtaaaaattcttgccgaatgctgtaggaccgatcacggttatacgccg
gattcgcgggccattcgttttctgttcgaggtcatggccaagtataacagcgaggaacag
cgacagtttattcagttcgtcaccggttcacctcgcttgcctgttggaggtttcaaaagc
ttaacacctccgttaacaatagtgcgcaaaacctttgatccgtctatgaagacagacgat
tttctaccatcagtaatgacttgcgttaactacctaaaactgcctgattataccactttg
gaaataatgcgggaaaagttacggatagccgcgcaagagggtcaacactcgttccatctc
tcctag
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integrated database retrieval system
