Solenopsis invicta (red fire ant): 105196003
Help
Entry
105196003 CDS
T03916
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03022
Basal transcription factors
soc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105196003
09124 Replication and repair
03420 Nucleotide excision repair
105196003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105196003
03400 DNA repair and recombination proteins [BR:
soc03400
]
105196003
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105196003
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105196003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Cys_box
DUF2894
VWA_2
Motif
Other DBs
NCBI-GeneID:
105196003
NCBI-ProteinID:
XP_011160004
LinkDB
All DBs
Position
12:16536043..16537810
Genome browser
AA seq
292 aa
AA seq
DB search
MSTEIETSLLVIVFDVNPMQRIVKQETKILSQCLDSTIVFANAHLMQSSNNELAIMACHS
HSARFLYPCENAVEIRQMDGQYEKFTMVERTVRQQLQQFINEIPMDAPLNTESLISGALS
MALCYIARLEREKVAGQKLHPRILVITASNDSATQYMNYMNIFFTAQRMNVILDVCSLDQ
ELTLLQQGCDISGGNYLKVPQLAGLLQYLLWVFLPDPSVRLKLVLPPPVKVDYRAACFCH
QELIDIGYVCSICLSIFCKFSPICTTCHTVFKMPGPMPIKMKKKKKNVDIVH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgaaatagagacgagcttgctagtaatcgtttttgatgtcaatcctatgcag
cggatagtaaaacaagaaacaaagatactgtcacagtgtttagactccacaattgtcttt
gccaatgctcatcttatgcagtcgtccaataatgaattggctataatggcatgccacagt
cacagtgctagattcctttatccttgtgagaacgcagtggaaataaggcagatggatggg
caatatgaaaagtttaccatggtggaacgtacagtgcgtcagcaattgcagcaattcatc
aacgaaatccccatggatgctccattgaacaccgagagtctcatttctggtgcactcagt
atggcattgtgttatatagctcggttagaaagagaaaaagttgctggccagaagctacat
cctagaatactggtcattaccgccagtaacgactcagcaactcagtacatgaactacatg
aacatattcttcacagcacagagaatgaatgtcattttggatgtatgcagtctggatcag
gagctaacactcttgcaacagggctgcgacatcagtgggggcaattatttgaaggtacca
cagcttgctggattgctgcagtatttattgtgggttttcctgccagatcccagtgttaga
ttaaaattagttcttcctccgccagtaaaagtggattatagagcagcatgtttttgtcat
caggaacttatcgatattggatatgtctgttctatatgtttatcaatcttctgcaagttc
agtccaatatgcaccacttgtcacactgtattcaaaatgccaggacctatgccgataaag
atgaagaaaaaaaagaagaatgtggatatcgtccattaa
DBGET
integrated database retrieval system
