Solenopsis invicta (red fire ant): 105196121 Help Entry 105196121         CDS       T03916                                  Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism soc  Solenopsis invicta (red fire ant) Pathway soc03018   RNA degradation Brite KEGG Orthology (KO) [BR:soc00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     105196121  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:soc03019]     105196121 Enzymes [BR:soc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      105196121 Messenger RNA biogenesis [BR:soc03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      105196121   mRNA degradation factors    3'-5' decay     Ski complex      105196121 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT Ski2_N DEAD Helicase_C ResIII DEXQc_Suv3 MTR4_beta-barrel ATPase_2 nSTAND3 PhoH DUF3067 Motif Other DBs NCBI-GeneID:  105196121 NCBI-ProteinID:  XP_011160176 LinkDB All DBs Position 4:complement(22557081..22562495) Genome browser AA seq 1209 aa AA seqDB search MTESTQLFGGPPPIWPDIRSELREYIECPERLPIHQLDNTQCYWPRKADVLSLLEFDLAP ISTTLKFDRDPITGKIGEIQEINLQGTGETARNSMSMTRAPGSLTDGVRGNPSNIPFWPG GFEEPKIPKNEIVGDIDFEKDLRTLAKGFSSGLEFKSDNCTPVNCITDETEASVPEETEN SIINDNVNLMAVIHEEGNLLGSWSSVEETKKESVQVLDNDIPFIDNSILSEDTSIPILKI SEKKTELVKTEWAEQLDISAPVTDFEKKIPDPAITFSYELDTFQKQAILKLEKNSNVFVA AHTSAGKTTVAEYAIALSQKHMTRVIYTSPIKALSNQKYREFKRKFESVGLLTGDLQINQ TASCLIMTTEILQSMLYCASDVLRDLEFVIFDEVHYINNEDRGHVWEEIVILLPQTINIV MLSATVPNPIIFADWVGRIKKRKMYVISTLKRPIPLLHYLYTGTDGKTKDDKFLVLDSNS QFLLDGWYKATNASDKKKDKSLKNSKRKIQMTPKQEDVLWRAFISHLQNNDMLPVVVFTL SRKRCDMNAATLRNLDLTTAREKHHVHVFFQSNIKHLKGSDRELPQVLMMQELLQKGVGI HHSGILPILREIVEMLFQSGVVKLLFATETFAMGVNMPARTVVFDSIRKYDGNSFRTLYP TEYIQMAGRAGRRGHDTTGTVIVMCRNDVPHFNDLKPMMCGEPQTLESKFKVTYSMLLNL RRVNESVTVEAMMRKSFKESPLASQEATYNGELQKVERELSNLPPLTEMQKKLSTFYHEA VDYLEDVKFLNPYLLNSKKAVKGLIEGRVLLISYANHYKKLALLLQVIYHKSSTQYKVLI LKDANVSTSESAEFKSPQIFEKWCEIIGLTKTEIFVPSMNPSHEVVTLSPWHILKITNCQ IKVDCSLVLNDWEKRQISRFKNDPPGQTCQMAIQELTSLSFNASSDALILQPYIEPSSKN DFQLRIQHRDKLKANLHNMKCTKIPNFEEQFRPVFERNQLEDKKRQLQLKLSDEGMALYP EYLNMVALLKHFKYIDNDERVALKGRVALQMGSNELLITELILKNVLTVLQPAEIAALLS ALIFQQRTEYEPKLTPTLTNACKIMTEVHAELEYLEQYYQLSTLQPLNFGLVEIVYEWAQ AKSFAEIMKMTDVQEGIIVRCIQQLGETLRDVKNAAVTIGDPVLKEKMEEASTAIKRDIV FAASLYTQD NT seq 3630 nt NT seq  +upstreamnt  +downstreamnt atgactgaatcaacacagttatttggtgggcctccacctatttggcccgatatcagatca gaactacgggaatatattgaatgtcctgaacgattacctatacatcagctggacaatact caatgttattggccacgcaaagctgatgttctttcattgctggaatttgatttggctcca attagcactacactgaaatttgatcgtgatccaataacaggcaagattggcgagatacaa gagatcaacttgcaaggcacaggggaaacagcaagaaattctatgtctatgacccgcgca cctggatcacttacagatggagttcgaggtaatcctagtaatattccattttggcctggt ggttttgaagaacctaaaatacctaaaaatgaaattgtgggtgatattgatttcgagaag gacttaaggacattagccaagggatttagctcaggattagaatttaaaagtgataattgc acgccagtcaattgtataacagacgaaacggaagcttcagtacctgaagaaactgaaaac tcgataatcaatgataatgtaaatttaatggctgtcatacatgaagagggaaatttgctt ggttcttggtcttcagtcgaggaaacgaaaaaggaaagcgtgcaagttttggacaacgac attcctttcatagacaattccattttatctgaagatacgagtataccaatcttgaaaata tctgagaaaaaaacagaacttgtaaaaacagaatgggcggagcagctggacatatctgcg ccagtgacagactttgaaaaaaaaatacctgatccagcgatcacattcagttatgaactg gacacttttcagaagcaggctattctcaaattggagaaaaacagcaatgtctttgttgct gcgcacacatcagcggggaagactaccgttgccgaatacgctattgcattgagtcaaaag catatgacgagagtgatttatacatctcccataaaagcactgtcaaatcaaaaatatcgc gaatttaagagaaagtttgaaagcgttgggttattaacaggtgatttgcaaataaatcaa actgcttcatgtctaatcatgacaacggaaatcttacaatcgatgttgtattgcgcatcc gatgtcttacgagatctagaatttgtcatatttgatgaagtgcattatataaataacgaa gatagaggacacgtatgggaggaaatagtcattcttttaccccagactattaatatagta atgttatctgcgaccgtaccgaatccaataatatttgcggactgggttggtcgcatcaaa aagcgaaagatgtacgtaatcagcaccttgaaaagaccaatacctcttttacattatttg tacactggcactgacggtaagactaaggatgacaaattcttagtccttgatagcaacagc cagtttttattggatgggtggtacaaagcgacaaatgcgtccgataaaaagaaagataaa tccttaaagaactctaagagaaaaattcagatgacgccgaaacaagaagatgtattatgg agagcgtttataagccatcttcagaacaatgatatgttacctgttgtcgtatttactcta tcgaggaaacgctgtgatatgaatgccgcaacgttgagaaatcttgatttaacgaccgcg agggagaagcatcatgtacatgtatttttccaatctaatataaaacatctgaaaggcagc gatagagaattaccgcaagtgctaatgatgcaagagctcttgcaaaaaggcgtaggtata catcacagtgggatactgccaattttgagagagatcgtagaaatgttatttcaaagtgga gtcgtgaagttactattcgcgacggaaactttcgccatgggagttaacatgccagcgcgc acggtggtgtttgattctatacgaaaatatgacggaaacagttttcgtaccctgtacccg actgaatacatacagatggctggtcgtgccggacggcggggtcacgacaccacgggaact gtcatagtgatgtgcagaaacgatgtgccacactttaatgacttgaaacccatgatgtgc ggcgagccgcagacgttggagtcgaaattcaaagtcacgtattccatgcttctaaattta agaagggtaaacgaatccgttaccgttgaggcgatgatgcgcaaatctttcaaagaatcg ccgttggcctcgcaggaagcgacgtataatggtgagttacagaaagtcgagcgcgaattg tcaaatctgccgcctctgaccgaaatgcaaaagaagctttccacgttttatcacgaggcg gtggattatttggaagatgttaaattcctaaatccctatttactgaactcgaagaaggca gtgaaaggtttaatcgagggcagagttctgttaatatcgtacgcgaatcattacaaaaaa ctagccttattattgcaagttatataccacaagagttccactcagtacaaagtcctgata ctcaaagatgcgaatgtgtccacttctgaatccgccgaattcaaaagtcctcagatattc gagaaatggtgcgagattatcggcttaacgaaaacagaaatattcgtcccgagcatgaat ccgtcgcacgaagttgtaactctgtctccgtggcatatactaaagataactaattgtcag ataaaagttgactgttctttggtattgaacgattgggaaaagagacaaatctcacgattc aaaaacgacccaccgggacaaacgtgtcagatggcaattcaagaattgacctctctatca tttaatgcttcttccgacgctctcattctacaaccatacatcgagccctcgtcgaaaaat gattttcaattgaggatacaacatagagataaattaaaagctaatctgcacaatatgaaa tgcacaaaaataccaaattttgaagaacaatttagacctgtattcgagcgaaatcaactt gaggataaaaagcgacagctccaacttaaactcagcgacgagggaatggcgttgtaccct gaatacctgaatatggtagcgctcctcaaacatttcaaatacattgataatgatgaaaga gtcgccttaaaaggaagagtcgcgttacaaatgggtagtaatgaactactgataacagaa ttgattctcaaaaatgtcctaaccgttttgcaaccggcggaaatagcagcgttactatcg gcactgatcttccagcaacgcacggaatacgagcctaaactcacaccaacccttactaat gcttgcaaaataatgaccgaagtgcacgcagaattggaatatctcgagcaatactatcaa ctatcgacattgcaaccgttgaatttcggcttggtagaaattgtctatgaatgggcgcag gcaaagtcgtttgcagaaatcatgaagatgactgatgtccaggagggaattatagttcgt tgcatacagcaactcggcgaaacgttgcgagacgtcaaaaatgcggctgtgaccataggt gatccggttttaaaggagaagatggaagaagcctcgactgcgatcaagagggacatagtt ttcgccgcatctttgtacactcaagactga

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