Solenopsis invicta (red fire ant): 105196151
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Entry
105196151 CDS
T03916
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein homolog
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soc04131
]
105196151
Membrane trafficking [BR:
soc04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
105196151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_N
HPS3_C
Motif
Other DBs
NCBI-GeneID:
105196151
NCBI-ProteinID:
XP_011160220
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Position
9:complement(10174529..10180158)
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AA seq
1173 aa
AA seq
DB search
MVRVITVHNFLGQNVVQIEESTATCTAISQGQEMLLLALPTHCVEVWELMNSDVKLRTVF
PTVDMINQMVHCTKGNYVVTLESKYLRDTASNNHANRVTSNFVRIYVNWATAKDQSQPMR
ARIAGRVTPSLNRPLNSLEMIELPLSVQPTMIACCQCTGNLLVASGNSAILHEFKVETQQ
VSKIKFIDFEPRPWSLGFTFTPTRIEIIEDFIAIMDNTNLSVFRLTNSMYEDIDQLSSLT
STSSSVDKTSISTDSSLVENSLGNDDTSLQGINVKHKSIDQDCQNATSENSETVIMGVKS
KDKKHKSTKGNTWYKPEGGDCNREMASNNKNYIDWEHLICNEKEEMQRLITQGIIDPASQ
SLTVNLPLISLERAGPGHAVSPFILNSADTRIFIKTTSPDIGWSENYMIKNLICLKINAG
NNNAKVDGILESFRDLVLKPLYMKKECNTTSVKKSMLRSDKYRYLQGVSCFICTTQEGYL
YHFSTASSSSLDATCLTTYPFTAPVHHVALEHTVLHALTEAGLESYTLRLSHHIAKLSNS
TDGIRVICPSVIEPVSLIGLRPFLGIQKLLHTRSYIILLAKADSSWTMYSLNLPKFENVY
FDILNAARSHKSSSPSTYRHLLGEAHALIRLAKDVSYNNADNEKFDDATHKNDLKLKNLY
NQSCALLADYYIRSEIESDWDLCIPYYKMSGLKPSEVLSRKCSQDAPGLLTFLTDALLTM
KSGSEADALFQGFNIIEIICKLEKEDLLKLIFGSPVLREYATEKLINLLLTHESDDTVKL
ALALLYIQADKQEQAEKALEPVSVRCIKQIVMERWELLFDMTAMKKRSPMIATFSDFAGI
LMLVKNTTFADILIQIIEDEGALSLHQIIQVFLEYLPSRVGRDGHNAAATLQVFLEKYLH
NYFTSKFVMEWPPTVNKNQIRSDFALVEAFKLLVRSYLGKLTQTRVYKIDLKEDQGENDK
EYFMFAKYRPSYLNKMPPYAKDYQRILSMNDFKDLGNFNNASETEKIIPKELFKLQSVLS
CEFLPVECLHEVKQFLETQNIDGNLSLKTLCIQNTEEVTTILMDTCPQAVVQYAKDKYTK
DTEWKNLIELTQDKIATSTTHQELQLLYTQIMKEILNHLPHALPMKSLHRILPRDDMAAF
QRCTEMCNQIMHADHVKSLIMETGQQLLTTLKL
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggtacgcgtgataacggtgcacaatttcctggggcagaatgttgtccagatcgaggag
tccacggcgacgtgcacggccatcagccagggacaggagatgcttctgctggcgttgccc
acacactgcgtcgaagtatgggagctgatgaattcggacgtcaagctgcgcactgttttc
cccacggtggacatgatcaatcaaatggtacactgcaccaagggaaactacgtcgtgacg
ctggaatcaaaatatctcagagacaccgcgagcaataatcatgcaaatagagtcacttct
aattttgtaaggatttatgtaaattgggctacagcaaaggatcagagtcaaccgatgcga
gccaggatcgccggacgggtcacaccgagtttaaatcgacctttgaacagtttagagatg
atagagttacccctgagcgtgcaacctacaatgatcgcttgctgccagtgcactggaaac
ttattggtagcctcgggaaacagtgccattctgcacgaattcaaggttgaaacgcagcaa
gtatcaaagataaagtttatagattttgagcctagaccgtggtcattaggattcacattt
acacctacgcgtatagagatcatagaggattttatagcaatcatggataatacgaattta
tccgtttttcgtctcacaaactcaatgtacgaggatattgaccaacttagttctttaact
tccacttcttcttccgtcgacaagacgtccatatccacagattcatctctcgtcgagaat
agccttggaaatgacgatacgtcgctgcagggaataaatgtaaagcacaaatctatagat
caagattgtcaaaacgcgacatctgaaaacagcgaaacagtgataatgggtgtaaaatct
aaggataaaaagcacaagagcacaaaaggaaatacgtggtataagccagaaggaggcgat
tgcaacagagaaatggcaagtaataataagaattacatagactgggaacatctaatatgc
aacgaaaaagaagagatgcaaaggctaattacacaaggaattattgatcccgcttcgcaa
tcgttgacggtaaatctgccattgataagcttagaaagggccggtccaggtcacgctgtc
agtccttttatactaaattcagcagacacaagaattttcatcaagacaacttcaccagac
ataggctggtctgaaaattacatgataaaaaatttaatatgtttaaaaatcaacgctgga
aataataatgccaaggtggatggaattctagagagtttcagagacctggtgttaaaacct
ttatacatgaagaaggaatgtaacactactagtgtgaaaaaatctatgttgcgatctgat
aaatacagatacttgcaaggtgtaagttgcttcatttgtactacgcaagagggatacctg
tatcacttctcgacagcgagcagcagttctctcgatgctacgtgtttaaccacttatcca
tttaccgcacctgttcatcatgtagcgctggagcacacggtacttcacgcattgactgaa
gctggtcttgagtcttacacattacgtctttctcaccatattgcaaaattgtcgaacagc
accgatggcattagagtaatttgtcctagtgtcatcgaaccggtaagcctaatcggttta
aggccattcctgggaatacagaaattgttgcatacgaggagctatataattctactggct
aaggccgacagttcttggaccatgtactctttgaatctacctaaatttgagaatgtgtat
tttgatatattaaatgcagcgaggagtcacaaatcttccagtccgagtacttatcgacac
ttactgggagaagcacatgctttgatacgcttagcgaaggatgtttcctacaataatgca
gataacgagaaatttgacgatgcaacgcacaagaatgatctcaagttgaaaaatctctac
aatcaatcatgcgcgttgctcgcggattactatatacgatcggagattgaatcggattgg
gatttgtgtattccttactacaagatgtctgggctgaaaccttcggaagtattatctagg
aaatgtagtcaggacgcaccgggacttctgacgttcctgacggatgcgcttctcacgatg
aaaagcggatccgaagcggacgcgcttttccaaggatttaatatcatagagatcatctgt
aagctggagaaggaggatctattaaaattgatcttcggcagtcctgtgttgagggaatat
gccactgagaaactgataaatcttctgctgacgcacgaaagcgatgatactgtcaaactc
gccttggcgcttttatacattcaggctgacaaacaggaacaagcggaaaaggcgttagaa
ccagtttctgtgcgatgtatcaagcagattgtcatggagcgctgggaactgctgttcgat
atgaccgcgatgaaaaagaggagtcccatgattgctactttctcagacttcgctggtatc
ttgatgctcgtaaagaataccaccttcgctgatatcctgatacaaataatagaagacgaa
ggtgcattgtcactgcatcaaatcatacaggtgttcctagagtacttgccgtcgcgagtt
ggaagagacgggcataacgcagccgcgaccttgcaagttttccttgagaaatatctacat
aattatttcacttcgaaattcgtcatggagtggccgccaactgtgaataaaaatcagata
cgttcggacttcgctctcgttgaggcgtttaaactattagtgcgatcgtacttaggcaaa
ttaactcagacgagagtgtataaaatcgatctcaaggaggatcagggagaaaatgacaag
gaatatttcatgttcgccaagtatcggccgagttatttgaacaaaatgccaccatatgcc
aaagattaccaaagaattttaagtatgaatgattttaaggatttagggaattttaataac
gcatccgaaaccgagaagattatacctaaggaattattcaagctgcaatccgtactgtcg
tgcgaatttttaccggtcgaatgtctacatgaggtcaaacaatttcttgaaacacaaaat
atcgatggaaatttatctcttaagacattatgcattcagaatacagaagaagtgacgaca
attctaatggatacttgtccacaagctgtagtacagtatgcaaaggataaatatacaaag
gataccgagtggaagaatcttattgaattaacgcaggacaaaattgctacttcaacgacg
catcaggagttacaacttttgtatacacaaatcatgaaagagatcctgaatcatttgccg
catgcattacctatgaaaagtctacatcgcatcttaccaagagatgacatggcagcattt
caaagatgtaccgaaatgtgtaatcaaattatgcatgcggatcacgtgaaatcattaata
atggaaaccggacaacaacttttgacaactctaaagttgtga
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