Solenopsis invicta (red fire ant): 105196213
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Entry
105196213 CDS
T03916
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soc03041
]
105196213
03009 Ribosome biogenesis [BR:
soc03009
]
105196213
Enzymes [BR:
soc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105196213
Spliceosome [BR:
soc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105196213
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
Pre-60S particles
Helicases
105196213
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
YknX_C
AAA_22
Cas3-like_C_2
PRK
Motif
Other DBs
NCBI-GeneID:
105196213
NCBI-ProteinID:
XP_025993179
LinkDB
All DBs
Position
14:13925178..13929356
Genome browser
AA seq
738 aa
AA seq
DB search
MITSNCDLIKTIEDDQEMPDYSENSDEEDDYQPRKQKKKESKDFDSDFQFTAAEHKQDPW
NDLSKYIKRKPNTKLDDKIKKVRKEHKQAGTEDDPVKIEPDQDDLKTGQDDDTISLSEDE
LKKDTFKTKKKKGKMKNLMKEKDQETIDFEEYTNSQTYATFYQMNLSRPLLKAITAMNFV
HPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPVLERLLYRPLDGPAISRVLVLVPT
RELGVQVYQVTKQLAQFTTVEVGLSVGGLDVKIQEGVLRKNPDIVIATPGRLIDHLRNAP
TFSLDSIEVLILDEADRMLDEYFAEQMKYIVKQCSRTRQTILFSATMTEEVKDLAAVSLD
KPIKIFVDSNQDVAFNLRQEFIRIRKEREGDREAILAALVCRTFHDHAMVFVQTKKQAHR
LHILLGLLGVKVGELHGNLTQPQRLENLRKFKDEEIDILLATDVAARGLDISGVKTVINF
VMPATLQHYIHRVGRTARAGRGGVSVSLAGEQERSLVKEVIKQAKNQVKNRIIPPDIIEK
YNKKLQSLESDVEKILQEEKSEKELAKVENEANRVEKLLKVEDDKDKRSWFQSKKERKKE
KENFRLTKKQVKSKKHEKEPSNIVQEKKKKQNEPKKDTAEDRARKELEKIAAYQARLAKK
SNRQKKIRTVTDENNHNFAKKGALKRPRSSFATDLTDTSKKGVKKMRYEANVKKKQNAQQ
KSKFAAKGKGQKKSFKKR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgataacaagtaattgtgatttgataaagacgatcgaggatgatcaggaaatgcctgat
tattcggagaattcggacgaggaggacgactatcagccaaggaagcagaagaaaaaagag
agcaaggattttgacagcgacttccaatttactgccgctgaacacaaacaggatccttgg
aatgacctgagcaaatacattaaacgcaaaccgaatacaaaattagatgacaagataaaa
aaagtcaggaaggaacataagcaggctgggacagaggatgatcctgttaaaattgaacca
gatcaagacgatctgaaaacaggtcaggatgatgatacaatttctctatcagaagatgag
cttaagaaagatacttttaagaccaagaaaaagaaaggcaaaatgaaaaatttaatgaaa
gaaaaggaccaggaaactattgactttgaggaatatacaaattctcaaacatatgctacg
ttttatcaaatgaacttgtctcgacctttgctgaaggccataacagcaatgaattttgta
catccaactcctatacaagccgctaccattcctgtagctttaatgggtcgtgatatctgt
ggttgtgcagcaacaggcacagggaaaactgcagcttatatgcttcctgttttggaaaga
ttattgtacagaccattagatggtcccgctatttcgcgcgttctcgtacttgtgcctacc
agagagctgggagtgcaagtatatcaagtgacaaaacaattagctcaatttacaacggta
gaggttggtttatctgttggtggattggatgtgaaaatacaggaaggtgtactgagaaaa
aatccagacattgtaatagcaacacctggaagattaatcgatcacttgagaaatgctcca
actttttcattggacagtattgaagtattaattttggatgaagccgatagaatgttagat
gaatattttgctgaacaaatgaaatatatcgtaaagcaatgctcaagaaccaggcagact
attctcttctctgctaccatgaccgaggaagtcaaagatttagccgcagtatctcttgac
aaacctattaaaatatttgtggatagtaatcaagatgtagctttcaatctgcgtcaagaa
tttattcgcatacgtaaggaaagagaaggagatcgtgaagcaatcttagcagcgctagtt
tgccgaactttccacgatcatgccatggttttcgtgcagacaaaaaaacaagctcacaga
ttacatattttactgggattattaggtgtgaaagttggagaacttcacggtaatctcaca
caaccacaacgattggaaaatcttcggaaatttaaagatgaggaaattgatatcttgttg
gcgactgatgttgctgcaagaggtttagatataagcggcgtaaagactgtgattaacttc
gtgatgcctgccactctacaacattatatacatagagtggggagaactgcaagagcaggg
cgtggcggcgtctctgtatcattagctggagaacaagaacgttctttggtaaaagaagtt
atcaagcaagcaaaaaatcaggttaagaataggataataccgcctgacataatagaaaaa
tataacaagaaattacaatccttggaatcagatgtggagaagattctgcaagaggaaaaa
agtgaaaaagaattagctaaagtagagaatgaagctaatcgcgttgaaaagttacttaaa
gttgaagatgacaaggataagagaagttggtttcaatccaaaaaagaaagaaaaaaagaa
aaagaaaatttccgattaaccaagaaacaagttaaaagtaaaaagcatgagaaagaacct
tctaatatagtacaagaaaaaaagaagaaacaaaatgagcctaaaaaggatacagctgag
gatagagcgaggaaagaattagaaaagatagctgcttatcaagcgcgattagccaaaaag
agtaatagacagaagaaaattaggacagttacagatgaaaataatcataattttgctaaa
aaaggagcactgaaacgaccaagatcgtcatttgccactgatttaacggatacaagtaag
aagggtgttaagaaaatgcgatatgaagcaaatgttaagaaaaaacagaatgcgcaacag
aaaagtaaatttgctgcaaaaggaaagggccaaaagaaatctttcaaaaaacgttaa
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