Solenopsis invicta (red fire ant): 105196252
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Entry
105196252 CDS
T03916
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
soc04040
]
105196252
Ion channels [BR:
soc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105196252
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ_SCN5A_C
SieB
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
105196252
NCBI-ProteinID:
XP_025992699
LinkDB
All DBs
Position
4:complement(6814460..6867355)
Genome browser
AA seq
2079 aa
AA seq
DB search
MSEDSDSISEEERSLFRPFTRESLAAIESRIAEEEARQKELQQRRAEGEGGFGRKKKKKE
VRYDDEDEDEGPQPDPMFEQGAPIPVRLHNEFPPELASTPLEDIDTFYHNQRTFVVISKG
KDIYRFSATDAMWMLDPFNPIRRVAIYILVHQFFSLFIITTILVNCILMIMPTTPTIEST
EVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVITLAYVTMGIDLGNLAALRT
FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKC
IKNFPDDGSWGNLTHESWARFNKNETNWYMDEAKNIPLCGNSSGAGQCLPGYTCLQGFGS
NPNYGYTSFDTFGWALLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVN
LILAIVAMSYDELQKKAEEEEAAEEEAMREAEEAAIAKQNKLEAQAAAREAAAAAAVAAV
EAADQIVKSPSDFSCHSYELFVGQEKGNDDNNKEKMSIRSIESVGDQRHIKQINNNHSAA
NKVRKVSAVPRAANGQFTYAYQESLRKASLSLPGSPFNLRRSSRGSHQFTIRNGRGRCFV
PPGGDRKPLVLSTYLDAQEHLPYADDSNAVTPMSEENGTIVVPVYYANLGSRHSSYTSHA
SRLSYTSHGDLAFPGIRGIGIDSIGKQITKQEQILRNRKTDNKQTTPANGHVTDTNQKTY
HFETSDIEDTMGKTKQQDNPFIEPSQQHTVVDMKDVMVLNDIIEQAAGRQSKTPEQGVST
YYFPTDDDEEPTFKDKLVAALYRGIDIFCVWDCCWLWLEFQKYVSLLVFDPFVELFITLC
IVVNTLFMALDHHDMDKDMERVLKSGNYFFTATFGIEATMKLMAMSPKYYFQEGWNIFDF
IIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVL
CIIIFIFAVMGMQLFGKNYVDHVDYFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWD
CMLVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSNLSAPTADNDTNKIAEAIDRI
ARFIKWIKRNILNFLKLMRAKLTNQISDQAPGEGPSNSWKEDGIDRDGDLDLADGELDAY
RDKKSAKELNQLEVAIGDGMEFTIHGDLKNKLKRSKLCMNNTKVIANSINHHDYRLDNDY
INQNEDDTISNKSYGSHKNRAFKDESHKGSMDSLNGEEKKDASKEDLEQEEEDVEDEGEE
REELDIEIIHADEDPIQSSYPADCCPENCYKKFPFLAGDDDAPFWQGWANLRFKTFRLIE
NKYFETAVITMILLSSLALALEDVHLQQRPVLQDILYYMDRIFTVIFFIEMLIKWLALGF
KKYFTNAWCWLDFIIVMVSLINFVASLAGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVV
VNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDANKTTLSYEIIPDRNACN
TENYTWENSPMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSREINKQPIRETNIYMYLY
FVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGNKKPLK
AIPRPRWRPQAIVFEIVTDKKFDMIIMLFIGLNMLTMTLDHYQQSDTFSKVLDYLNMIFI
VIFTSECLMKIFALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVA
KVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKSGL
DDVYNFKTFGQSMILLFQMSTSAGWDSVLDGIINEEDCQEPNNEIGYPGNCGSSTIGIAY
LLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRY
DQLSDFLDVLEPPLQIHKPNKYKIVSMDIPICKGDLMFCVDILDALTKDFFARKGNPIEE
TGDLGEVQARPDEAGYEPVSSTLWRQREEYCARLIQNAWRKHKQQRLGGPSEESDDPDID
LCVRQTQVLVESDGYVTKNGHRVVIHSRSMSITSRTADV
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagattctgactctatatcagaggaagaaagaagtttgttccgtccgttcacg
cgggagtccctggcagcgatcgagtctcgcatcgccgaggaagaggctaggcagaaggag
cttcagcagagaagagcggaaggcgagggaggttttggacggaagaaaaagaaaaaagaa
gtacggtatgacgacgaggacgaggacgaaggtcctcagccggatccaatgtttgagcag
ggagcgccgatcccggtccgactgcacaacgaatttccacccgagttggcctccacacct
ctcgaggatattgataccttctaccacaatcaaaggaccttcgtcgtcattagcaaggga
aaggatatatacagattctcagcgacggacgcgatgtggatgctcgacccgttcaaccct
atacggcgcgtggccatctacatattggttcaccagttcttttctctcttcatcatcact
acaatattggttaactgtatactcatgatcatgcccaccacgcccaccatcgagtccacc
gaagtgatatttacgggcatctacacatttgagtccgccgttaaggtgatggcgaggggt
ttcattctgcagccttttacctatcttagagatgcatggaattggcttgacttcgtagtt
ataactttagcttatgtgacgatgggcatagatctaggcaaccttgccgctctcaggaca
tttcgagtcctccgagccttgaagactgtcgctattgtaccaggtctgaaaaccattgtc
ggcgctgtgatagaatccgtgaagaacctgcgcgatgtgataatcctgacgatgttctcc
ctctccgtctttgcgctgatgggccttcagatttacatgggggtcctcacgcaaaagtgt
ataaagaactttcctgacgacggctcctggggcaatctcacccacgagagttgggcgcga
ttcaacaaaaacgaaactaattggtacatggacgaggctaaaaatatacccttatgcggg
aattcgtcgggggcggggcagtgccttcccgggtacacgtgtttacaaggattcggctct
aatccgaattacggttacacgagcttcgacactttcggttgggcattgctctccgccttt
cgtctcatgactcaggattattgggagaatctgtatcaactggtgctaagatcggccgga
ccgtggcacatgctcttcttcatcgttatcatcttcctcgggtccttctatctcgtgaac
ttgatcctcgctattgtcgcgatgtcgtacgacgagttgcagaagaaggccgaagaggag
gaggccgccgaggaagaagctatgagggaagccgaggaagcggcgatagcgaagcagaac
aagctcgaggcgcaggctgcagcgcgggaagctgcggccgcagcggcggtcgccgccgtg
gaagctgcggatcagatcgtcaagtccccgtcggatttctcgtgtcacagctacgagctg
ttcgtcggccaggagaagggcaacgacgacaacaataaggagaagatgagcatacgttcg
atcgagtccgtgggcgaccagaggcacatcaagcagatcaacaacaaccacagcgctgcc
aataaagtgcggaaagtcagcgccgtccctcgcgccgctaatggccagtttacttatgcc
taccaggaaagcctgcggaaggcgagcctgagcctacccggctcaccgttcaatctacgc
cgcagcagccgtggcagccaccagttcacgatacgcaacggccgcggccgatgcttcgta
ccgccgggcggcgaccggaagcccctcgtcctgtcaacgtacctggacgcccaggagcac
ctgccctacgccgacgactcgaacgcggtcaccccgatgtccgaggagaacggcacgatc
gtagtaccggtgtactacgcgaatctcggctcgcgccactcgtcctacacctcgcacgcc
tcgcggctctcctacacgtctcacggtgacctggccttccccggcatccgcggcatcggc
atcgacagcatcggcaagcagatcaccaagcaagaacagatcctcaggaatagaaaaaca
gacaacaaacagacgacaccggccaacggccacgtcacggacaccaatcagaaaacttat
catttcgaaacttccgatatagaagataccatgggcaagaccaagcaacaagacaatccg
tttatcgagccgtctcagcagcacaccgtggtcgacatgaaggatgtaatggtgctgaac
gacataatcgagcaggccgccggtcgccagagcaagacgccggaacaaggagtttcgacc
tattactttccgacagacgacgatgaagaacctacattcaaggacaagttagtagcagca
ttatatcgtggtatcgacatcttttgcgtctgggattgctgctggctttggctcgagttt
caaaagtacgtgtcactgttggtctttgatccgttcgtagaactcttcattacactctgc
atcgtcgtcaatacgctcttcatggcactggatcatcacgacatggacaaagacatggaa
agagtactcaaatccggcaattacttcttcacggcgacgttcggtatcgaagcgactatg
aagctgatggcgatgagcccaaaatattattttcaagagggctggaatattttcgatttt
atcatcgtcgctctttcgcttttggagttgggtctcgagggcgtgcaaggtctgtcggta
ttacgatctttcagattgctgagagtgttcaaactggcaaaatcgtggcctacgttgaat
ttgctgatctccatcatgggcagaacggtgggcgcgttgggtaatctaacgttcgtgttg
tgcatcatcatcttcatcttcgccgtgatgggtatgcagctcttcggcaagaattacgtc
gaccacgtcgactacttcccggacggtgatctacccagatggaactttaccgacttcatg
cactcgtttatgatcgttttccgagtgttgtgcggagagtggatcgagtctatgtgggat
tgcatgctggtcggggatgtctcttgtataccattcttcttagctaccgtcgtcatcggt
aacttggtcgtcctgaatctcttcttagctctgttgctcagcaatttcggctcatcaaat
ctgtcagccccgactgcggacaacgacacgaacaagatcgcggaggcgatcgatcgaata
gcgcgtttcattaagtggatcaagcgaaatatcctgaattttttgaagttgatgcgagcc
aaactcaccaatcagatatccgatcaggcgccaggtgagggaccgtccaacagttggaaa
gaagatgggattgatcgcgatggggacctagatcttgcagatggcgagttggacgcatac
agagacaagaagagcgctaaagagcttaatcagcttgaagttgctattggcgacgggatg
gaatttactattcatggagatctgaagaacaaactgaagagaagcaagctgtgcatgaac
aacacgaaggttatcgcgaattcaataaaccatcacgattatagactggacaacgattat
attaatcagaacgaagacgacactatcagtaacaaatcgtatggcagtcacaaaaatcgc
gcatttaaggacgagagtcacaaaggcagcatggattcgttaaacggcgaggagaagaaa
gacgccagtaaagaagatttggaacaggaggaagaagacgtagaagacgagggtgaagaa
agggaagagctcgacatcgagataatacacgcggacgaagatcccattcaatcgagttac
ccggccgattgttgtccagaaaattgctacaaaaaatttccatttttggccggcgacgac
gacgccccgttctggcagggctgggcgaacttgagattcaagaccttccggctgatcgag
aacaaatacttcgagactgccgtcatcaccatgatccttctaagtagcttggccttggct
ttggaggacgttcatcttcaacaacgacctgtcctgcaagacatattgtattacatggac
cgaatattcactgtgatcttcttcatcgagatgttgatcaagtggctggctctaggattt
aaaaagtatttcacgaacgcctggtgctggctcgattttatcatcgtcatggtatcgctc
attaacttcgtagcgtcgctcgctggcgctggcgggattcaagccttcaaaacaatgcgg
accctaagggccctaaggccgctcagggcgatgtctagaatgcaggggatgcgggtagtc
gttaatgccttggtccaagccattccatccatcttcaacgtattgctggtatgccttatt
ttctggcttatattcgctatcatgggggtgcagctgtttgctggcaaatactttaagtgt
gtcgacgcgaacaagacgacgctcagctacgagataataccggatcgtaacgcttgcaac
accgagaattacacgtgggaaaattcgccgatgaatttcgaccacgtcgggaaagcgtac
ctgtgcctattccaagtggcgactttcaaaggctggatccaaatcatgaacgacgcgatc
gactctagagagatcaataagcaaccgattcgtgaaacgaacatttacatgtatctctac
ttcgtgtttttcattatatttggatcgttttttaccctcaatctgtttatcggagttatc
atcgacaactttaacgagcaaaagaaaaaagccggcggatcccttgaaatgttcatgacg
gaagatcagaagaaatattacaatgccatgaagaaaatgggcaataagaagcctctgaaa
gctattcctcgaccgaggtggcggccgcaggcaatagtgttcgaaatagtgacggacaaa
aagttcgatatgataatcatgctgttcatcgggctgaacatgctcacgatgacgttggac
cattatcagcagagcgatacgttcagcaaagttctggactatctcaacatgatattcatt
gtgatattcaccagcgagtgtctcatgaagatcttcgctcttcgctaccactacttcaag
gagccatggaatctctttgattttgttgttgttatattgtcaatattaggtctggtgctc
agcgacattattgagaaatatttcgtgtcaccgactttgcttcgtgtagtgagagtggca
aaagtcggtcgtgtgcttcgactcgtgaaaggtgccaagggtatccgaacccttctcttc
gccctggcgatgtcgttgccagccctcttcaacatttgcctactgctgtttttggtgatg
tttatctttgcgatattcggaatgtctttcttcatgcacgtcaaagacaagagcggactg
gatgacgtgtacaatttcaagacattcgggcagtcaatgatactgctatttcagatgtca
acctcggccggttgggacagtgttctcgacggtataataaacgaggaggactgccaggag
ccaaacaacgagatcggctacccgggcaactgtggatcctcgacaatcgggatcgcatac
ctgctctcgtatctcgtgatcagcttcctaatcgtcattaacatgtacatcgctgtgatc
ctcgagaattactcgcaggccaccgaggacgtgcaggagggtctgacggacgacgactac
gacatgtactacgagatttggcagcagttcgatccggacggcacgcaatacatcagatac
gaccaactgtcggacttcttggacgtattggagcccccgttgcagatacacaagcccaac
aaatacaagatcgtgtcgatggatatccccatatgtaagggagaccttatgttttgcgtg
gatattctcgatgccctcactaaggactttttcgcgcggaagggcaatccgatcgaagag
acgggcgatctgggcgaggtccaggcccggcccgacgaggccggttacgagccggtctcg
tccactctatggcggcaacgcgaggagtattgcgcccgtctcatacagaacgcctggcgg
aagcacaagcagcagcgtcttggcgggccaagcgaggagagcgacgatccggacatcgat
ctgtgcgtccggcagacccaggtgctcgtggagagcgacggctacgtcacgaagaacggt
caccgcgtcgtcatacacagccgatcgatgagcatcacttcgagaaccgcggacgtctga
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integrated database retrieval system
