Solenopsis invicta (red fire ant): 105196400
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Entry
105196400 CDS
T03916
Name
(RefSeq) collagen alpha-1(I) chain
KO
K19720
collagen type III alpha
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105196400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
soc00536
]
105196400
Glycosaminoglycan binding proteins [BR:
soc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105196400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_14
Motif
Other DBs
NCBI-GeneID:
105196400
NCBI-ProteinID:
XP_025988570
LinkDB
All DBs
Position
4:complement(27021398..27029390)
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AA seq
821 aa
AA seq
DB search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NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgcggctacgcttgctctggatcgctttgctggctgttacagctcaggctgacgaggga
tataattatcctagaccggcaaatccgcttataccaggtacttcgggaggagaagccggc
acaagaccaggctatccatctggtccaggtacacctggaggtccggtaggaccaggagct
cctggtggacaacctggtggaaggccaagtggtccaggttatccatcaggaccaacagga
tttccaggacgtccaggtgctcaaccaggaggacaacagcctagctttccgggtcaagga
ccttccaatggatatcctagggaacgaccatcaattccgtttccgggcggtgaaccaacg
ggaagaccagcagcgggtcctggtgcaccaagtggaccaagtggacgaccagaggggttt
ccaacaggaccgagcggtggataccctagtggtagacctggtggacaagccccaggtggg
tttccaggtggacaaagacctggatacccgaatggtggacccagtcaaggaaaaccggaa
ggtcctggatatcctagtggtcgaccgaatggacaagggccaagcggaggttatcccggc
ggacaagctcctggcggttatcccggtggggcacagaagccaagtggtccgggaactcaa
tatcctagtggagggccaggagctggctatcctggaggtactcaaagacctggtggtggt
ccaggtcctcagggaccaggaggatacccgggagcaggacctggaggtcctggaggtcag
caaggcccaagtggaccatctaccaacggctatcctagtactagaccaggaacacaaaga
ccaggaggctacccgagtggtccaggcccgcaaggaccagaaggatatccaagcggacca
ggagcacaacgaccaggaggttatccgagtggcccacaaggaccaggaggagttccaggt
agaccaggaacgcaaggaccaggaggattcccaggtggaccaggcccgcaaggaccggga
ggatttccaggtggatcaggcccgcaagggacgggaggattcccaggtggaccaggcccg
caaggaccaggaggattcccaggtggaccaggcccgcaagggccgggaggatttccaagt
ggaccaggccagcaaaggccgggaggattcccaggtactggtcatccagtaggtcctggc
ggacctggagaatacacgcatgaagatgatggatcatatgacgaaggtgattattcagct
attcctggcgaacctggtaccgattatcctatatatagtgaaattccggagaccagtttc
cgctgcgatgcccaacaattccctggttattatgctgacgtggaagcccagtgccaagtt
tttcacatatgtgccaacaataagacttacgatttcctttgtccaaacggaacaattttc
catcaacaatttttcgtttgtgtatggtggaatcaattcgactgtaactctgcaccaagc
ctttattatttaaatgaaaatctttatgactatactataatgggagcaccagctcaagga
ccttcaggacctgcgggacctggtacttatccaggaggtccaggaggtccaggcggtcct
ggtggcccaagtggtccaagttatccaggaggtccacaacgtcctggtggtccaggaggg
cctcaaggcccgtcaggaccaagtggttatccaggaggacctcaaggtccatcaggccct
caaggtccgtcagggccactaggtccatcaggccctcaaggtccctcaggacctcaaggt
ccgtcaggaccaaacggttatccagggagaccttcaggtccatcaggaccgagtagttat
ccgggtggtcctcaaggaccaatgggtccaagtggtccaaacggctttcctggacgacca
ggaggagttccatccggtccgggaccacaaggtccatctgggcgacctggacctggatat
ttaaatccgccggcaggaccgtccggacctacttatccaggaggtccaggtgctcctagt
ggccctagtggtccaagttatccaggaggtccgcaacgtcctggtggtccaggacctcaa
ggaccaagcggtccaggatatcctggaagacctcaaggaccatctggcccttctggaccg
tcgacgagacctcaaggacctagtccaggttatcctagtggaccatctccaggatttcca
ggacaacctcagggacccactggtccgcagggtccaagcggcttcccgggtacaccgggt
ggtcgtccgcaaggccctggtggcccaggtggatatcccagtggtagaccaagcggccca
tcgtttccaagtggaccttctggaccaggaggtattcctgggaaacctggggagatgggt
tcgccgttcccgccgcaaggtcctgcgaagccagatcgtgagtacttgcctccgcgggtt
ggataa
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