Solenopsis invicta (red fire ant): 105196470
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Entry
105196470 CDS
T03916
Name
(RefSeq) CCR4-NOT transcription complex subunit 7 isoform X1
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105196470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105196470
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105196470
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105196470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
YceM-like_C
Motif
Other DBs
NCBI-GeneID:
105196470
NCBI-ProteinID:
XP_011160727
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All DBs
Position
2:complement(2685597..2697670)
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AA seq
302 aa
AA seq
DB search
MPSATGGTNQIGQQKGGGTMPINEECGIRDVWGHNLEEEFRTIRQVVQQYQYIAMDTEFP
GVVARPIGEFRTNADYQYQLLRCNVDLLRIIQLGLTFLDESGNTPGGSYTTWQFNFKFNL
HEDMYAQDSIDMLQNSGIQFKKHEEEGIDPLEFAELLMTSGIVLVDDIKWLSFHSGYDFG
YLLKLLTDQKLPQEESEFFELLRIYFPTIYDVKYLMKSCKNLKGGLQEVAEQLEIQRVGP
QHQAGSDSLLTGMVFFKMREMFFEDNIDDVKYCGHLYGLGTSFVMNGSSTYMDSNGDNAS
TS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagctaccggtgggaccaaccaaattgggcaacagaagggaggggggactatg
cccattaatgaagaatgtggaatcagagatgtatggggacacaatttagaagaagagttt
cgtacaattcgtcaagttgtacaacaatatcagtatattgcaatggatacagaatttccg
ggtgttgtagctaggcctattggagaattcagaactaacgccgactatcaatatcagcta
ttacgttgcaatgtagatcttctgcgaataattcaacttggtctcacatttcttgatgag
tcggggaatacgccaggcggtagctatacaacatggcagtttaattttaaattcaactta
catgaagacatgtatgcacaggatagtatagatatgctacaaaatagtggtatacagttc
aagaaacatgaagaggaaggcattgatcctttagagtttgctgaactgttaatgacatcg
ggaattgttcttgttgatgacataaaatggctatcttttcattctggctacgattttggt
tacttattgaaactcctcacggatcaaaaattaccacaggaggaaagtgaattcttcgag
cttcttaggatatactttccaacgatatatgatgtaaaatacttaatgaaatcgtgcaag
aacctgaaaggcggtttacaagaagtggcagaacaactggaaattcagagagtgggtcct
caacatcaagccggctccgattcccttcttactggaatggtcttttttaaaatgcgagaa
atgtttttcgaagataatattgatgatgtaaagtactgtggacatctatatggtctggga
acgtcatttgtcatgaacggatctagcacatatatggacagtaatggagataacgcctcg
acatcgtaa
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