Solenopsis invicta (red fire ant): 105196536
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Entry
105196536 CDS
T03916
Name
(RefSeq) CLIP-associating protein 1-A isoform X5
KO
K16578
CLIP-associating protein 1/2
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soc03036
]
105196536
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
soc04812
]
105196536
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
105196536
Cytoskeleton proteins [BR:
soc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
105196536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
Vac14_Fab1_bd
HEAT_2
HEAT_EZ
TOR1L1_N
Cnd1
Adaptin_N
MMS19_C
Arm
INTS1_R4
PDS5
HEAT_Maestro_2
ParcG
Sec7-like_HUS
ECM29_N
Ipi1_N
Sec6
Motif
Other DBs
NCBI-GeneID:
105196536
NCBI-ProteinID:
XP_011160823
LinkDB
All DBs
Position
6:7652475..7701865
Genome browser
AA seq
1446 aa
AA seq
DB search
MAMNPRDMDGFMPLLSTTDIKKKLNVGSALLNYLGDSSKSIECQDIGMFIDNIIPWLGNG
NPKVVQNGLEILTYLADRMGHDFKPYISTIIQPTIDRLGDSKDATREKAQLVLLKIMEKG
CMSPQNLLDRLRPTFNHKNAKLREEVLILLTTTLNEHGADEMALSGVIPSIVKLLSDPSE
KVRETALNTLADIYRHVGERLRVDLQRKHNVPQAKMLLLIEKFDQLKAAGDLLPLAMSSD
VGKDSDELDRAIKSAPVKRLNMPPPPKRGQFGPARTPSSALAPSGTSSYTVPRATTVKRA
LSVRSASSAQAGAIDEECFIAAFEDVPPVNIFSAKDLEEHMKIIKDTVGDDKKDWKQRID
SLKKLRAIIVAGGTNYENFHECLKNIQRPFEAACTDLRSQVVREACITLAYLSLSLKSKF
ASFGETILLTLMNLIQNSAKVVASAGGVAVRFILQNTHCSRYVPIIISCVSNKSKDIRKV
SCEYLALILQTWPTQILQKHVTILSDALKKGIADSDAEARAFARKSYWAFKNHFPEQAEI
LLNTLDASYKRSLMSLSNSGSSNSLNVVANARSSSVSPRTARPVMSAADRGTPGVRSTSA
IDLQAAQRAKARLMYANMSRQKAAALPRPSKSPDPIAIASPERIARTRTRVSGVSQSQPS
SRSGSPSSRLSYATYNREGDSLIGRPRRLSGHTIGSTSNSREPSPQRFGMDRSYASKLRG
RNLHMSPTDSSRPPVMAQKMLQKSREAESALADALTFDSIDNYTRIPGNKGDHSDDSENS
SICSERSIDGFRRASDSFSWSGSQPRLYRDLWDQSIPKDIKEIIENCGHKHWGDRKEGLV
GLQHYLSSGNTLTTTDLRRVTDIFTKMFMDSHTKVFSLFLDTLNELIITHNEGLGDWLYV
LCARLLNKLGTDLLGSIQTKIHKTLDVVRDCFPGQQLLPAVMRYLTDPTQTPNSRVKVAA
LTFITQIAETAEPSALGSSAATALARLLDWSNDGKSHDVRRHAQNAVISLYNLNPPQVTM
ILSELPKYYQETAWPLVQNHLRKSSASSNPASPGTPPPRAQNSPARTKAKNDIKADAKTE
IDGGDENLEEVYNFSHRSLRRTTAEIQNYGFERLERATTSKDSGISNMADVEERMEGLTL
SNSGRSSSVSSPTQRGRSVSNITVNGSDTIAGDLILPQENNGYKTHGSSPDSINRPEIVD
NMVKTLQSKVTQTSEKVSSLQEFQLYVREGDSSYIKRNFKKVLKVLLDSLSNDGKVIQVE
VLQTLIDMLKCSELIESFSSYNELLVLKVIYAYKSDDQKVDTSSGSGGRSPVHWNAEKCA
ATMAMVLKPEQIIHLVSTIIATETYPLNMGAIKMLHKVVEHWGREAIEPHLAKVMPGLIK
AYDDAESAVRKSAVFCMVAIHVAVGEEVLKPHLSSLYSSKLKLLNIYIQRAQQANSQPAS
PRNNKN
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaatcctcgtgatatggacggcttcatgccgctcctgtcgacgacggacatc
aagaaaaaactcaacgtcggtagcgcgctcctcaactacctcggtgactcgagcaagagc
atcgagtgtcaggacatcggcatgttcatcgacaacatcataccgtggctcggcaatggc
aatcccaaggttgtccagaatggtttggagatcctcacgtatctcgcggatcgaatgggt
cacgacttcaaaccttacatctccactattatccagccaacgatagacaggctaggtgac
agtaaggatgctaccagggagaaggcgcaactggtgcttctgaaaattatggagaaagga
tgcatgtcgccgcagaatcttctggacagacttcgtccaaccttcaatcacaagaatgca
aaattacgagaggaggttttaatcctgttgacgacgacgctgaacgagcatggagcagac
gagatggcactgtcgggagtgatcccgagcatcgtgaagctgctgtccgatccctcggaa
aaggttcgggaaaccgctctgaacacgctggcggacatctatcgacacgttggcgagaga
ttacgcgtcgatctgcaaagaaagcacaatgtgccgcaagccaaaatgctcctgctaata
gagaagttcgatcagctgaaggccgccggtgatctcttacccttggcaatgtcgtccgac
gttggcaaagacagcgacgaactcgatagagcgatcaagtcggctcccgttaagaggctg
aacatgcctcctcctccaaaaagaggtcaatttggacctgctagaacaccatcctctgcc
ttagctccttctggtacatcatcctacacggtcccaagggcaacgaccgtcaaaagagct
ctgtccgtaagatcggcatcatcagcgcaagccggagctattgacgaggaatgctttatt
gctgcattcgaggacgtgcctcccgtcaatatattctcggcgaaagacctcgaggaacat
atgaagattatcaaggataccgtgggtgacgataaaaaggactggaaacagagaatagat
agcttgaaaaagttaagagccattatagtcgcaggtggcactaattacgaaaatttccac
gagtgcctaaagaacatacagcgaccattcgaggcggcctgcaccgaccttagatcccaa
gtagtgcgagaggcgtgtataactctcgcttatctgagtttgagcctgaagagcaaattc
gccagttttggcgaaacgattttgctcacgttaatgaacctcatacagaacagtgccaag
gtcgtggcgtcagctggtggggtggcagttcggtttatccttcaaaacacccattgcagt
cgatatgtgcctattattatatcgtgcgtgagcaacaagagcaaagatattcgcaaggtg
tcctgtgaatatctggctctaattctgcagacctggcctacgcagatattacagaagcac
gtaacaatattgtcggacgcgctcaagaagggcatcgcggattccgatgcggaagcgcga
gccttcgccaggaaatcatactgggcatttaaaaatcactttccagagcaggctgagata
ttacttaatactttggatgcatcgtacaaacgctccctgatgtctctcagcaatagcggc
agtagtaatagcttaaatgtcgtggctaatgcgagatcgtcgagcgttagtccacgtaca
gcaagacccgtgatgagcgcggcagaccgaggtacaccaggggttagatctactagtgcg
attgatttgcaagctgctcagagagcgaaagcgaggttgatgtacgcgaatatgagcaga
cagaaagcagcagcacttcctcgtcctagtaaatctccagatcccattgcgattgctagc
cccgaaagaattgcaaggacgagaacaagagtgtcgggagtttcacaatctcaacctagc
agtagatcgggttccccgtcgtctagattaagttacgccacatataatcgcgaaggcgat
tcactgatcggcagaccgaggcgattatccggacacaccattggcagcacgagcaatagt
cgcgaacccagtccgcaaagattcggaatggacaggagttacgcgagcaaactgagaggg
aggaacctacacatgtcgccaacggacagcagcaggccgccagtgatggcgcaaaagatg
ttgcagaagtcgcgcgaagcggagtccgctttggcggatgctttaactttcgatagtatc
gacaattacactagaatacctggcaacaaaggggatcacagtgacgacagcgagaatagc
agtatatgctcggaaagaagcatagacggttttagacgagccagtgattcgttctcatgg
agtggctctcaaccgagactataccgtgatctatgggatcagtctatcccaaaggacatt
aaagagattattgaaaattgtggtcacaaacattggggagacagaaaagaaggcttagtg
ggtttgcaacattatttgagcagcggaaatactttgacaacaacagatttacgtagagtg
acagatatttttacaaaaatgtttatggattcccacactaaggtgttcagtttattcttg
gacacgttaaacgaactaataattactcacaacgaaggtcttggcgactggttatatgtt
ttgtgcgcgagacttcttaataaattgggcactgatttattgggatcaatacaaacaaaa
attcacaaaacgcttgacgttgtgagagactgtttcccgggccaacagctcctaccagct
gtgatgaggtatctgacagatccaacacaaacaccaaattctcgcgtgaaagtagcagca
ttgacttttatcactcagatcgctgaaacggcagaaccgtccgcgctgggcagttctgca
gcgacagcacttgcacgattactcgactggtcgaatgacggtaaaagccacgacgtgagg
agacacgcgcagaacgctgtgatatcactttacaatcttaatccgcctcaagttactatg
atactctcggagttaccgaaatactatcaagaaacagcctggcctctggtacagaaccac
ctgaggaaatcgtccgcatctagtaatccggcgtcacccggtacaccacctcctagagca
caaaattcgccagctcgaacgaaagcgaaaaatgacattaaagcggatgcgaagactgaa
attgatggaggtgatgagaacttggaggaagtatacaatttttcccacagatctttgcga
cgcacgactgctgaaattcaaaattatggctttgaacgtttggagagagctaccaccagt
aaagacagtggtatcagcaatatggcagatgtagaagagagaatggaaggtcttacgtta
tccaattctggtcgatcttcatccgtttcttcaccaacgcaacgaggacgatctgtcagt
aatataactgttaacggatccgatacgattgccggtgacttgattctacctcaagaaaat
aatggttataagacgcatggatcatcaccagattcgataaacagaccagaaatcgtagat
aatatggttaaaactctgcaatcaaaagtgacgcaaacctcggagaaagtatcatcgttg
caagaatttcaactatatgtccgcgaaggcgattcgtcatatattaaacgaaatttcaag
aaagtgctcaaagttttgttagatagcttatccaatgacggtaaagtgatacaggtggaa
gtgctgcaaacgctgatcgatatgcttaaatgttctgagttgatagaaagcttttcctcg
tataatgagttactggtattgaaagttatctatgcctacaaatcggacgatcaaaaagtt
gatacttccagtgggagtggcggcagatctccagttcattggaatgcggagaagtgcgcg
gcaacaatggccatggtcttaaagccagaacaaattattcacttagtctctactataatc
gctacggagacgtatccgttgaacatgggcgcgataaaaatgttgcacaaagtggtagag
cattggggtcgggaagctattgaacctcatcttgccaaagttatgcctggtcttatcaag
gcttacgatgacgccgagagcgccgttcgcaagagcgcggtcttctgcatggtggcgatt
cacgtcgcggtcggcgaggaggtgctgaagccgcacttgagttccctgtactccagcaag
ctcaagttgctaaacatctatatacaacgcgcgcaacaagcaaacagccaacccgcgagt
ccacgcaataacaaaaattaa
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