Solenopsis invicta (red fire ant): 105196717
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Entry
105196717 CDS
T03916
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
KO
K14793
ribosomal RNA-processing protein 9
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soc03009
]
105196717
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
90S particles
Other 90S particles
105196717
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
NBCH_WD40
Beta-prop_EML
Beta-prop_TEP1_C
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Cytochrom_D1
Beta-prop_WDR75_2nd
WD40_like
Tnp_P_element_C
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
105196717
NCBI-ProteinID:
XP_025990665
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All DBs
Position
3:21089836..21092540
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AA seq
467 aa
AA seq
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MSFFIRNNRGRGGTQKRKHNGHLSKTSTAQFTKQSRKSKKSKFNDNESIASTDEEFAEEN
LGNEAESETEEEEETAQEKRLRLAKKYLQEIEEEEKDRAEFEEGAVARRLRDEYLEEKGR
LRKTIAANYVGHDEFIILKCKEHKSSITCICLSSDGNILYSGSKDGSLVKWSVKEKIKLK
AIRGDRGKTKPGIKSVRCLAISTDGKFLVVGDGGCKNIKIFSGDTLDHIKDLQGHRGLIS
GLVFRKDTHTLYSASEDRSVKVWNLDDMAYVESLFGHQNAITSIDALSRERAITTGGYDG
TIRIWKIVEESQLIFNAHSVGNSTDVVKLINEEHFFSGGNDGQLCLWGCLKKKPLCSVLE
AHEKDETNGQPMCISSIATLLNTDLVASGSRNGTIKLWQCGEGFRSLNPLFEVKLLGFIN
ALAFTPNGNHLIAAVGKEHRSGRWWQIPEAKNAVVIIPLVHKQKTNK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttttataagaaataatcgaggaagaggtggtacacaaaagcgtaaacacaat
ggtcacttaagtaagacgtctacagctcagtttacaaaacagtcaagaaaatcaaagaag
tccaaattcaatgacaatgagagtattgccagtacagatgaagaatttgcagaagaaaat
ttaggaaatgaagcagaaagtgaaactgaggaagaggaggagactgcgcaagagaaacgt
ttgagacttgcaaagaaatatcttcaagaaattgaagaagaagaaaaagatagagcagaa
tttgaagagggtgcagttgcacggagattgcgtgatgaatatctagaggaaaagggccga
ttaagaaaaactatagcggcaaattatgttggtcatgatgagtttataatattgaaatgt
aaagaacacaagtcgtctattacttgcatttgtctttctagtgatggcaatatattatat
tcaggatctaaagacggcagtttagttaaatggtcagttaaggaaaagattaaattaaaa
gcaattagaggagacagagggaaaacaaaacctggaataaaatctgtacgatgtttggca
attagcacagacggaaagtttcttgtagtaggagatggtggatgtaaaaatataaaaata
ttttctggcgatactctcgatcacataaaggatctgcaaggtcatagaggtcttatatct
ggattggtattccgtaaggatactcacacgttgtattccgcatccgaagatagaagcgtg
aaagtttggaatttagacgatatggcttatgttgaatctttattcggacatcagaatgct
attacatctatcgatgccctgtcgcgagaacgcgctatcacgaccggtggttacgacggg
actattaggatatggaaaatagtcgaagagtcgcaattaatatttaatgcgcatagcgtc
ggtaatagcactgatgtggtcaaactcatcaatgaagagcattttttcagcggtgggaat
gacggacaactttgcctttgggggtgtttgaagaagaagccactatgttcggtactggaa
gcacatgaaaaggacgaaaccaatggtcaaccgatgtgtatttccagtatcgctacacta
ctgaatacagatttagtagcatcaggatcgcgaaatggtacgatcaagttgtggcaatgc
ggtgagggctttcgatctttaaatccgttgtttgaagttaaattactgggcttcataaat
gcactcgcattcactcccaatgggaatcaccttattgctgctgtaggtaaagaacatagg
agtggtagatggtggcaaatacctgaagcaaaaaacgctgttgttatcatacctctagta
cataaacaaaaaacaaataaataa
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