Solenopsis invicta (red fire ant): 105196734
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Entry
105196734 CDS
T03916
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105196734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soc03009
]
105196734
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
105196734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_33
AAA_14
AAA_2
NPHP3_N
TIP49
RNA_helicase
AAA_28
Rad17
Mg_chelatase
AAA_18
nSTAND3
ABC_tran
IstB_IS21
NACHT
TsaE
ATPase
AAA_7
AAA_17
Vps4_C
DUF815
AAA_11
Motif
Other DBs
NCBI-GeneID:
105196734
NCBI-ProteinID:
XP_011161116
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All DBs
Position
6:complement(10696901..10701588)
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AA seq
938 aa
AA seq
DB search
MQKMGKLNSSIDIIPLQGSSGDYRSRLLDNKHGTNIRIFRDQSLISRVQTYMHENENKVY
IDVNEMADALQRRYKDYRGKKRGAFRAMVRKAYDDLTEMFSKKPVTRECPTYDDEDDDDD
DFEDVDVESDTQRASVDDMLLQMYKKAQFKQNGNSSDKELIDISSDDDVAKVDSKDSKNE
KSIKTPEPGGTIAEESSQQTSSKLETTTVKPETTTVKEAVAPKPDVTTSKPETPVKSKLP
ANEATKSLLLETTRKRQRDKDNNNGQFSLVKKARIVPIMESKITFSDVGGNDKVLKIVCK
LLAHMKHPEIFKRLGISPPRGFLLHGPPGCGKTLLAHAIAGELKMSLLKVAGPELVTGVS
GDSEARIRELFEQALSLAPCVVFLDEIDAVTPNRATAQREMERRIVAQLLSSLDELNLNE
NGDRVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDREARARILAVHTEKVVLAPNVSL
STIASLTPGFVGADLVALIREAAMVAVDRIFEGLNKSKQEEKSSEATKVEKQVDKEVEIA
ENSDNLIDSSVTEASTTIGNELTFPKELPKSPISGIAEMDVIQEHSADLSTLLAWLRTEP
PLSPERLSTLCIEHSDFEAALRIVQPSAKREGFATVPDTTWDDVGSLRDIRQELQMAILA
PVKHSEHFNTLGLTAASGVLLCGPPGCGKTLLAKAVANEAGINFISVKGPELLNMYVGES
EKAVRQCFLRARNSIPCVIFFDEIDALCPKRTEGDNSATARVVNQMLTEMDGVESRQGVF
LMAASNRPDIIDPAVLRPGRLDKILYVGLPNASDRVDILRAVTKNATKPKLASDVDLNKV
AYDNRCEGYTGADLAALIREAGMEALKEIIAGYGQTEISMRHIFQAFDKVQPSIREKDMK
QYEKLSKLYSGKKNPEVTPMDTPVDASIVDVVMEPMET
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatgggcaaactgaactcgtcgattgatattattccgttgcaaggatcaagc
ggagattacagatcgaggctcttggacaataagcatggaacgaatataaggatattccgg
gatcaatcgcttataagtcgcgtgcagacgtacatgcacgaaaacgaaaataaggtttac
atcgatgtaaatgaaatggcagatgcgttgcaaaggcgatacaaagattatcgtggtaag
aagcgcggtgcattccgtgcgatggtacgcaaagcttacgatgaccttaccgagatgttt
tcgaagaagcctgtcacacgcgaatgtcccacctacgatgacgaagatgatgacgacgat
gatttcgaggatgtggacgtcgagtcagatacacaacgtgcttcggtagatgatatgttg
ttacaaatgtataagaaagctcaatttaaacagaatggaaactcgagcgataaagaattg
atagatattagtagcgacgacgatgttgccaaagtcgattctaaagattccaagaacgaa
aaaagtataaagacacctgagcctgggggtaccatagctgaagaatcttcacagcaaacc
tcttcaaaactagaaacgacgactgttaagccagaaacgactactgtcaaggaagcagta
gcaccaaagccagatgtgactacctcaaaaccagaaacacctgtcaaatcaaaattgcct
gcgaatgaagccacaaaatctttattattagaaactacaaggaaaagacaaagagacaag
gataataacaatggacaattttcacttgtaaaaaaagcaagaatcgtacctatcatggaa
tcaaaaattacattctctgatgtaggaggtaatgacaaagttttaaaaattgtctgcaaa
ttattagcacatatgaaacatcctgaaatcttcaaacggcttggtatatctccaccgaga
ggatttttacttcatggaccacctggctgtggaaaaaccttactggcacatgcaattgca
ggagaattaaaaatgtctctactaaaagtagcaggacctgaacttgtgacaggagtatct
ggagacagtgaagcgcgtatcagagaattatttgaacaagccttatctcttgcaccatgt
gttgtttttttggatgagatagatgctgtcactccaaatagagctacagctcaaagagaa
atggaaagaagaattgttgcgcaattattatcaagtttagatgaattgaatctcaatgaa
aatggagacagagtactggtaattggtgcaacaaatcgaccagattcattagatcctgct
ttaagaagagcaggacgtttcgatcgtgaagtgtgccttggaataccagacagagaagcg
agggctaggatcttggcggtgcatactgaaaaagttgtattggctcctaatgttagtttg
tcgacaatagcctcccttactccaggttttgtaggtgcagatttagttgccttaattaga
gaagctgccatggttgctgtagatagaatatttgagggtttaaataaatcaaaacaagaa
gaaaagtcatctgaagcaaccaaagttgaaaagcaagtagataaggaagttgaaattgct
gaaaattcagataatttaatcgatagtagtgtgacagaagcctctactacgattgggaat
gagcttacatttccaaaagaattacctaaaagtccaatttcaggaattgcagaaatggat
gtaatacaagaacattcagcagacttgtcaactttattggcttggttgcgtactgaacca
ccactttccccagaacggctgtcaactttgtgtatcgaacacagtgattttgaggctgct
ctacgcattgttcaaccttcagcgaaaagagagggatttgccacagttccagatacaacc
tgggatgatgtcggctcactgcgagatatacgacaagaattgcaaatggcaattctcgct
cctgttaaacactctgaacactttaatacgttaggtttaacagctgccagtggagtgtta
ttgtgtggtccacctggatgtggaaaaacactgttggccaaagctgtcgctaatgaagct
ggtattaattttatttcggttaaagggccagagcttttaaatatgtatgttggcgaaagt
gagaaagcagttcgtcagtgtttcttaagagcaagaaattcaataccttgcgtcatattt
ttcgatgagatagatgcattatgtcctaaaagaacagaaggcgataattcagcgacagca
cgcgtagttaatcaaatgctaacagaaatggatggtgtggaaagtcggcaaggagtattc
cttatggcggctagtaatcgacctgatattatagatccagctgttttaaggccaggaaga
ctggacaaaattttatatgttggacttccaaatgcttcagatagggttgacattttgcgt
gcagtaacaaagaatgcaacgaaaccaaaacttgcttcagacgtagatttgaataaagta
gcatatgacaataggtgtgaaggttacactggtgcggatttagcagctttgataagagaa
gctggtatggaagcattgaaggaaatcattgccggttatgggcaaacagaaatttcaatg
cgacacatttttcaggcatttgataaagtgcaaccgtccattcgtgaaaaggatatgaaa
caatatgaaaaattaagcaagttgtattcgggtaaaaaaaatcctgaagttacgccaatg
gatacgccagtagatgcatcaattgtggatgttgtcatggagccaatggaaacttaa
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