Solenopsis invicta (red fire ant): 105196821
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Entry
105196821 CDS
T03916
Name
(RefSeq) zinc finger protein castor homolog 1 isoform X1
KO
K25209
zinc finger protein castor
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
105196821
Transcription factors [BR:
soc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105196821
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
Motif
Other DBs
NCBI-GeneID:
105196821
NCBI-ProteinID:
XP_025991239
LinkDB
All DBs
Position
2:12203495..12296797
Genome browser
AA seq
1675 aa
AA seq
DB search
MSAVTSPYGPAEMLSDSVYNYATTRRGAADQDSDSQYEAQAQLQISSIQSKPRNKRKNFK
PISSRMAEVSDESERDDDEPEVVEESSSEILEYERKTMLLPAEERSKQRLNNNEASPMDL
SVATRPPSSEADDDSADSLRHKFILEQLRSQKFYSPGTEARSPNSDSSDRSGSGVLDAES
SRLDDQDTQFEDERGNDVDGSEVEIEERKPFEGMREYAESTMQELLAIYGLAGGELAKSV
SRQLPPTFLNPNAGQLAQGKMKVKEEKDASSMAPGSPPTPPHTPQSPQRAIPSLGNLSQS
CQTSNANSPNLQQQQQQQQQQQQQQQQQSQQQQSQEQQQQQHPMHAMTNSPLSQILVQNP
ALAQLLQQNPAILSQNPQLAQLLQQNLQAQMGSVLFQNVRREESEDSRVPPTIASLAAMK
VEAADPKVSALLRQSMSPVADSLMSGSKTSVSQPIIDYSRYVRRYTSSQECGSTYCKELG
CREHFHCLDCSGRVFVKKEEMIRHFKWHKKRDESLQHGFMRYSPTDDCSEKHPGRTCPHN
RKQTHYHCIHENCDKVYISTSDVQMHANYHRKDSAIIQEGFQRFRATESCATDHCPFVGQ
RTTHFHCRRPGCRFTFKNKADMDKHKSYHIKDEQLSRDGFKKFMKSEACPFDQCRFSRVC
NHIHCIRPHCSYVLHSSGQLFSHKRKHERHESELAYRKYKQITAVGGVRPPGSWAPDELS
AQSLSLSLNGESSNEGRGSPSYYSLEDSFQSASDLAMDLTAPTTTITASGSSVNLNQQQH
QQSQQLTAAELAYLVPATSDCACNAGKEHHHCGLDRCGATLKDPREVREHLKEHETQERI
TDAFFEEGGCDDSCPYADKEKHYHCNWENCREVILSTDKPFRRLQHYKIHEYSRQLNLSC
SSHALSSDVTLTHLTDIDAMFRRKRGRPPKNRVIEIWSGGDPATHTHDSPQAIFTSFKLP
KPQTPNLTSNMLMDDREGSISPSNSLGEPEGFATFNSEGCPDSACVLRSTRHHHCSQLRC
HFSTDRPDQLLMHSKDFHDNVDIPPGFAFYDKMVDCRLPGCHSNRVNRHFHCTRPNCGYS
FVRYSTMALHEKQHSSGHVESCNQESSNQECQTQLQSLIQETKPRIQVKNPAELIEKPDE
SMLAADQESRSIIEDKESELASPDNGKTTVVRAAGTYYPVSGPPSEPALPGVVLSMRTSV
HQESPVMPSMSSTSSHTLYGPEQSCSRPFCKLKRKNHYHCNACNQAFSELDRLVAHIAKH
STGAILSQQQHDIVSPSPNQLQHDYIAQLSQKHDFISPNAQIAQNIQNFQSQMQRQMQQT
LNQHSQSKDIKLEKPRCSIDIGVQNVPNVKREPSEIICRDEGNNTIIDSHENGQLPQPPI
QPSNMQQPSIPTSFELDLSHGFHFPSPAVMAAMNQQIALMNQALPPFLQHGAMYAGGPGL
MFAPGISPTNFLPPARDENPLASLAANLNLNKRSLSPPDANSPEAKKQRLHHSMRMLKDE
PVPEGYVRFRFNEDCRYPHCGYREHQTHFHCMRQDCGYSFCDKTRFVQHTARHERLDTLM
GGDFQQYRANVPCGRAQCAYTSSLGSMQNKASHFHCLKCDFVCTDTNKVVAHRRQHAKLD
SIAAAGFQKFTPSQPCGAVQCQHSGKQTHYHCLQCQYAVLGLAQMSAHKYRHMDS
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgtaaccagcccgtatggccccgcggagatgctttccgactcggtctacaac
tacgcgacgacccgacggggcgccgccgatcaggacagcgactcccagtacgaggcccag
gcccagttgcagatcagcagcatccagagcaagccgcggaacaagcggaaaaacttcaag
cctataagcagccggatggcggaggtgtccgacgaatccgagagagatgacgacgagcca
gaggtcgtggaggagagttccagcgagatcctcgagtacgagaggaagacgatgctgctg
ccggccgaggagagatcgaagcaaagactaaacaacaacgaggccagtccgatggacctt
tcggtcgccaccagaccgccgtcctccgaggccgatgacgatagcgcggactctctcagg
cataagtttattctcgagcagctgaggtcgcagaagttttactcccccggtacagaggcg
aggagcccgaactccgattcatcggatagaagtgggagcggcgtcctggacgcggaatcg
tctcgcttggacgatcaggacacccaattcgaagacgagcggggcaacgacgttgacggc
agcgaggtcgagatcgaagagcgaaagcccttcgagggcatgagggagtacgcggagtcg
acgatgcaagaacttttggcgatctacgggctggcgggaggcgaactggcgaaatcggtc
agcaggcaattgccgcccacgttcctcaacccgaatgctggccagctagcccaaggaaaa
atgaaggtaaaagaggagaaggacgcctcgtcgatggcgccaggaagtccacccacgcca
ccgcatactccgcaaagtccgcaacgcgcgattccgtctcttggtaatctttcgcaatcc
tgtcaaacgtcaaacgcaaactcgccgaatctgcagcagcaacagcagcagcagcaacaa
caacagcagcagcagcagcagcagtcgcagcaacaacagtcacaagagcagcaacaacag
caacatcccatgcacgccatgactaattcaccgttgagtcagatattggtgcaaaatcca
gcattggcgcaactgctgcaacaaaatccagcgattctgtcgcaaaatccgcagttggcg
cagctgctgcagcaaaatctgcaggctcagatgggcagtgtgctctttcaaaacgtgagg
cgggaagagtccgaggattccagggtaccgccgacaatagcgagcctggcggcgatgaag
gtggaggcagctgacccgaaggtttccgcgttactcaggcagagtatgtctccagtagcg
gattctttgatgagtggttctaagacgtcggtgtcccaaccgatcatcgattattctcgc
tacgtgaggagatatacatccagtcaagaatgcggcagtacgtattgcaaggaactgggc
tgcagggagcactttcattgtttagactgtagcggaagggtgttcgtgaagaaggaggaa
atgatcaggcacttcaagtggcataagaaaagggacgagtccttgcagcacggttttatg
aggtactcaccgacagacgattgttcggaaaagcaccctggccgtacctgcccgcataac
agaaagcagacccactatcattgcattcacgaaaattgcgacaaggtgtacatatcgaca
tcggacgtgcagatgcacgcgaattatcatcgcaaggactcggccataatacaagagggc
ttccagcgatttcgagccaccgagagttgcgcgactgatcattgtccgttcgttgggcaa
cggaccacgcactttcactgtcgtcgaccgggatgtcggtttacattcaaaaataaggcc
gatatggacaagcacaagtcttatcacatcaaggatgaacaactatcgcgcgacggtttc
aaaaaatttatgaaatcggaagcctgtcccttcgatcagtgccgattctcccgggtttgc
aatcacattcattgtatacgaccgcactgcagttacgtcttgcactcttccggtcagctc
ttttcgcacaagcggaaacacgagcgtcacgaatcagaactggcttatcggaagtacaaa
cagatcaccgccgtaggtggtgttcgtccacccggatcatgggcgccggatgaattgagc
gctcaaagcttatctttaagtctgaacggtgagagctcgaacgaagggagaggttctccg
tcgtattattccttggaggattctttccaaagcgcgagcgacctcgctatggatctcacc
gccccaacgacgaccattacagctagcggaagttctgttaatctcaatcagcagcaacat
caacaatctcaacagctcaccgccgccgaattggcctatttggtaccggctacctcggat
tgcgcttgtaacgcaggcaaagagcaccatcattgcggattagaccgctgcggagcgacc
ttgaaagatccccgggaagtcagagaacatctaaaggagcatgagacgcaggaacgcata
acggatgctttctttgaagagggcggctgcgacgacagttgtccgtacgcagacaaagaa
aagcattatcattgtaattgggaaaactgccgagaagtaatactttctaccgacaagccg
tttcgcagattgcagcattacaagatccatgagtacagccggcaattaaacctctcctgt
tcctcgcacgctctatcttctgacgttacattgactcacctgacagacatcgatgcgatg
ttcaggcggaagcgtggtagaccgcctaaaaatcgcgtaatagaaatctggtcgggcggt
gatcctgcgacacatacccacgattcgccgcaagcgatcttcacgagttttaagcttccc
aaaccgcaaactcctaatttaacatctaatatgctaatggatgatcgagaaggtagcata
tcaccctcgaacagtttaggcgagccggaaggattcgctacgtttaactcggaaggatgt
ccggactcggcttgcgtgcttagatcgaccaggcaccatcattgttcacaattacggtgt
catttctccaccgatcggccagaccaattgctcatgcatagtaaagattttcacgacaac
gttgacataccgccgggcttcgccttctatgacaagatggtcgactgtcgactgcctggc
tgtcacagcaatcgtgttaatcgtcatttccattgtactagaccgaattgtggatattca
tttgttagatactcgacaatggcattgcacgagaagcaacactcttccggtcacgtcgaa
tcctgcaatcaagaatcgagtaatcaagaatgtcaaacacaacttcagtcgttgatccaa
gagacgaaacctagaatccaagtaaaaaatcccgccgagctgattgagaagcccgacgag
agtatgctggcagctgatcaggagagcaggtcaataatcgaggataaggaatccgagctt
gcgagtcccgacaacggcaagaccaccgtggtgagggcggctggcacctattatccggtc
agtggaccgccgagcgaacccgcacttccgggcgtcgtgctatccatgcgaacttccgtg
caccaagaatccccagtcatgccatctatgagctccacctcgtcgcacactctatacgga
ccagaacaaagctgcagcagaccgttctgcaaattgaaacgcaagaatcattatcattgc
aacgcgtgtaatcaggctttctccgagttagatcgcttggtggcacatatagcgaagcat
tcgactggtgccattctcagccagcagcagcacgacatagtcagcccatcgcctaatcag
ctacagcacgattacatcgcgcaactatcgcagaagcatgactttatatcgccgaatgct
cagatagctcagaacattcagaactttcagagccaaatgcagcgacagatgcagcagacc
ctcaaccaacattctcaatcgaaagatatcaaattggagaaaccgagatgcagtatcgat
atcggtgtgcaaaatgtcccaaacgttaagcgagaaccatctgaaattatatgtagggac
gaaggcaacaataccataatagatagtcacgaaaacggtcaattgccgcaaccgccaatt
cagcctagtaatatgcaacaaccttcgataccaacaagtttcgagcttgatctcagtcat
ggttttcacttcccaagtcctgctgtgatggccgcaatgaatcaacagatcgctctgatg
aatcaggctctaccaccgtttcttcagcacggcgcaatgtacgccggtggacctgggcta
atgttcgcgcccggtatatcaccgaccaattttcttccacccgcgagagatgagaacccc
ctagcctcgctggcagctaatcttaatctgaacaaaagatctctctcaccaccagatgct
aattcaccggaagccaagaagcaaagacttcatcattcaatgcgtatgctgaaggacgag
cctgtaccagagggatatgttagattcagatttaacgaagactgcaggtaccctcattgc
ggctacagagaacatcagactcacttccactgcatgcgccaagattgtggctattcgttc
tgcgacaaaactcgttttgtgcagcacactgcaaggcacgaacggttggataccttgatg
ggtggtgatttccagcagtatcgagccaacgtgccgtgtggcagagctcaatgcgcatac
acgtcgtcccttggatcaatgcagaacaaggcgtcacattttcactgtttgaagtgcgat
ttcgtctgcacagatacgaacaaggtggtcgctcatcggcgacaacacgccaaactggac
agtatcgcggcggcgggtttccagaaatttacgcccagtcagccgtgcggagctgtgcag
tgtcaacactctggcaagcaaacgcactatcattgtctgcagtgccaatatgcagtgttg
ggcctggcgcaaatgtcggcgcacaagtaccgacacatggactcctaa
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integrated database retrieval system
