Solenopsis invicta (red fire ant): 105196840
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Entry
105196840 CDS
T03916
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105196840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105196840
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
105196840
Prokaryotic type
Archaeal type
TFB
105196840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
Sigma70_r4
RB_B
HcyBio
Motif
Other DBs
NCBI-GeneID:
105196840
NCBI-ProteinID:
XP_011161274
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All DBs
Position
9:1062569..1068257
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AA seq
315 aa
AA seq
DB search
MASSSRNATNKICCYAHPDATLIEDYRAGDQICSECGLVVGDRVIDVGSEWRTFSNEKSG
VDPSRVGGPENPLLNGADLSTMIGPGTGAASFDGFGTAKYQNRRTMSSSDRALLNAFREI
NGMADRINLPKTIVDRANALFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEIC
AVSKISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPNMVQKAATHIARKAVE
IDIVPGRSPISVAAAAIYMASQASEDKRSQKEIGDIAGVADVTIRQSYKLMYPHANKLFP
EDFKFATPIDQLPQM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttcatcacggaatgctacaaacaagatttgttgttatgcacatccagatgct
acacttatagaagattacagggcaggagatcagatttgttcagaatgtggattggttgtg
ggagatagggtgatagatgtaggttcagaatggaggacatttagcaatgaaaaatcagga
gtggatccatcgcgtgttggtggaccagagaatccacttctcaatggggcagacttgtct
acaatgattggtccaggaacaggtgctgcgtcttttgacggttttggtactgccaaatat
caaaatcgccgtacaatgagcagttctgatagagctctgcttaatgcatttcgtgagatc
aatggtatggcagatcgtattaatttaccaaaaactatcgtggacagagccaatgcatta
tttaaacaagtacatgacggaaaaaacttgaagggtcgcgcaaacgatgcaattgcttct
gcatgtttatatattgcctgccgacaagaaggtgtaccacgtacatttaaagagatttgt
gcggtcagcaaaataagcaaaaaagagatcggtcgatgtttcaaattaattcttaaagct
cttgaaaccagcgtggatctcatcaccaccggtgacttcatgtccagattttgttccaat
cttggtcttcccaatatggtacagaaagccgctacacatattgctaggaaagcagtagag
atcgacattgtacctggaagatcgcccatctctgttgccgctgcagcaatttacatggcg
tcacaggcatcagaagacaagcggtcacaaaaggaaattggtgatattgctggcgtcgcg
gatgttacaattcgacaatcgtataaattaatgtatccacatgctaataaactcttccca
gaagatttcaaatttgccacaccaattgatcagttaccacaaatgtaa
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