KEGG   Solenopsis invicta (red fire ant): 105196868
Entry
105196868         CDS       T03916                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
soc  Solenopsis invicta (red fire ant)
Pathway
soc03030  DNA replication
soc03410  Base excision repair
soc03420  Nucleotide excision repair
soc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:soc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105196868
   03410 Base excision repair
    105196868
   03420 Nucleotide excision repair
    105196868
   03430 Mismatch repair
    105196868
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:soc03032]
    105196868
   03036 Chromosome and associated proteins [BR:soc03036]
    105196868
   03400 DNA repair and recombination proteins [BR:soc03400]
    105196868
DNA replication proteins [BR:soc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105196868
  DNA Replication Termination Factors
   ELG1-RFC complex
    105196868
Chromosome and associated proteins [BR:soc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105196868
DNA repair and recombination proteins [BR:soc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105196868
  Check point factors
   HRAD17(Rad24)-RFC complex
    105196868
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA Rep_fac_C AAA_11 AAA_16 AAA_22 ABC_tran nSTAND1 DUF2247 AAA_23
Other DBs
NCBI-GeneID: 105196868
NCBI-ProteinID: XP_011161320
LinkDB
Position
6:9711941..9714165
AA seq 353 aa
MSLWVDKYRPKTLANLDYHLEQAEDLKNMVQKRDFPHLLIHGPSGAGKKTRISCILRELY
GVAAERLKTENMQFETPSKKKLEILTNSSNYHTEVNPSDAGIYDRIVVMELIKATAQTHH
IDISQKEFKVVLLSNVDQLTKDAQHALRRTMEKYISTCRLILCANSTSRVLPAIRSRCVR
IRVPAPTASEIKSILHSICKREGLTLPDELANRLIEASDRNLRRAILMLEACKVEQYPFT
VDQKISQPDWQVFIRNTASMMVSEQSPKVLLDVRNRFYDLLTRAIPCDLIFRGLLQECIK
NCDDQLKREIIDVASEYQHRMIRGSKPIFHLEAFAARFMAIYKKYIESSLDGF
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgagtttgtgggtcgacaaatatcgtccaaagacacttgcgaatttggattatcacctt
gagcaagcagaggacttgaaaaatatggtgcagaaacgggactttccacatttattaata
catggaccctctggtgcaggaaagaaaactcgaatatcatgtattttaagggaactttat
ggagtcgctgctgagagattaaaaacagaaaacatgcagtttgagacaccatctaaaaag
aaattagaaatattaacaaatagcagtaattaccacacagaggtaaatcctagcgacgca
gggatatatgacagaattgttgttatggaattgataaaagcaactgcacaaacgcatcat
atagatataagccaaaaggagtttaaagtggtactgctgtcaaatgtggatcaacttaca
aaagatgcccaacatgcgcttcgtaggacaatggagaagtatatcagtacatgtagactg
attctttgcgcgaattcgacgtcacgagtcttacccgcgattcgatcgcgatgcgtgcga
atcagagtccccgcgccaaccgcttctgagatcaaaagtattttacactctatttgtaaa
cgcgaaggactcaccctacccgatgagttagccaatcggctgatcgaagctagcgataga
aatcttcgacgagcaatactaatgcttgaagcttgcaaagtcgagcaatatccatttact
gttgatcaaaagatatcgcaaccagattggcaagtgttcatacgaaacacagccagtatg
atggtttcggaacagtcccctaaagtacttttagatgtacgcaacagattttacgacctg
ttgactcgtgctataccgtgcgatctaatatttagaggattgttgcaagagtgcataaag
aattgtgacgatcagttaaaaagagaaattatcgatgttgcatcggagtatcaacacaga
atgatacgtggctcaaaacctatatttcatttggaggcttttgctgcacggttcatggcg
atttacaagaaatatattgaatcatccttggacggtttttaa

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