Solenopsis invicta (red fire ant): 105197035
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Entry
105197035 CDS
T03916
Name
(RefSeq) transcription factor Sox-2 isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
105197035
Transcription factors [BR:
soc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105197035
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
DDHD
SPATS2-like
Motif
Other DBs
NCBI-GeneID:
105197035
NCBI-ProteinID:
XP_011161532
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Position
9:complement(8830276..9243794)
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AA seq
537 aa
AA seq
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MHTMETDMKGGSLHAQMPPHPHQGVSPMGHHTGMAYGSIGSIVHSSGLSGSPPAVSASGL
SLGLQHHHQSSHHYTSMQVAVAAAAVQQQQQQQQQQQQSMHAQMAAQQNAAHQQQHHQHQ
QTQQQQQQSQHQANNHSNPNNPNNPSNSSNAKNNNMDRVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLIKK
DKFPLGGSVAGVGGMLGVDQRQVGAGGGPQQPQLPRDVYQMPNGYMPNGYMMHDPTTAYQ
QHVAYGSHMGGAAAASAVAYPRYDSMGHHMGGGSPSPINSYMNGYGGYGGTTVPGGSPSP
YHQAQSGSQLSSHSPSGSSIKSEPTSPASGGGIHTPTPTGGPTTTGAAGPAGQPVKREYM
GQQQAHQASQGDLGQMISMYLPGGVEQGVVQHGGSVYSPGPSPDSLAHRHGAMQPIAHMS
DSDRKMLNPETGCYSESVRAWSFRRGLEPAVTSFFSPVSSSLSGPSRDQSGINIGDY
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgatggagacggacatgaagggcggcagtctgcacgctcagatgccaccgcat
ccgcatcagggtgtatcgccgatgggccaccatacggggatggcatacggctctataggc
tcgatagtgcatagctccgggctgtcgggtagtccacccgcggtcagcgcgagtggcctc
agcctgggtctgcagcaccatcaccagtcatcgcaccattatacatccatgcaggtagcc
gtcgctgccgcggccgttcagcagcagcagcagcagcagcaacagcagcagcagagcatg
cacgctcaaatggcagcgcaacagaacgcagcccaccagcaacagcaccaccaacatcag
cagacgcagcagcagcaacagcagtcgcagcatcaagccaacaatcacagcaatccgaac
aacccgaacaaccccagcaattcctccaacgccaagaataacaacatggaccgcgtgaag
aggccgatgaacgcctttatggtatggtcgcgtggacaacgtcgcaaaatggcccaagaa
aatcccaagatgcacaattccgagatatcgaagcgccttggcgccgaatggaaactactc
agcgagaccgagaaacgtccgttcatcgatgaggcgaagcggctgcgcgccgtacacatg
aaggaacatccggattacaaatacagaccgcgccgcaagacaaagaccttgataaagaag
gacaagtttccactcggcggaagtgtcgccggtgtcggcggaatgctcggcgttgatcaa
cggcaagtcggagctggcggcggaccgcagcagccgcagttaccacgtgacgtgtatcag
atgcccaacggctacatgcccaacggttacatgatgcacgatccgactaccgcgtatcag
caacacgtagcgtacggcagtcatatgggtggtgcagcggccgcctcggccgtcgcctat
cctaggtatgattcgatgggtcaccatatgggcggtgggagtccaagtcccataaacagc
tacatgaatggatacggtggctacggcggtaccaccgtacccggaggctcaccgtccccg
tatcatcaggcgcaatcgggttctcagttgtccagccacagtcctagtggcagcagcata
aagtccgagccgacgagtccggcgagcggcggtggcatacacacgccgacgccgaccggc
ggcccgacgaccacgggagcggccggtccagccggccagccggtcaagcgagagtacatg
ggtcagcagcaggcgcaccaggcatcgcaaggcgatctcgggcagatgatctcgatgtac
ctgccagggggcgtcgagcagggagttgtgcaacacggcggcagcgtctactccccgggt
ccgtcgcccgactctttggcgcatcgtcacggggccatgcagccgattgcacatatgtca
gatagcgatcgtaaaatgttgaacccggaaaccggctgctactccgaatccgtacgagca
tggtcgttccgtcgtggcctcgaacccgccgtcacgtcattcttcagcccggtctcctca
tcactctccggaccgagccgtgaccaatccggaataaatattggcgattattaa
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