Solenopsis invicta (red fire ant): 105197072
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Entry
105197072 CDS
T03916
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
soc03015
mRNA surveillance pathway
soc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105197072
09122 Translation
03013 Nucleocytoplasmic transport
105197072
03015 mRNA surveillance pathway
105197072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105197072
03041 Spliceosome [BR:
soc03041
]
105197072
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105197072
TREX complex
105197072
Spliceosome [BR:
soc03041
]
Complex C
Other components
EJC/TREX
105197072
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105197072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Btz
BspA_v
Motif
Other DBs
NCBI-GeneID:
105197072
NCBI-ProteinID:
XP_011161593
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All DBs
Position
10:complement(14248577..14251745)
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AA seq
253 aa
AA seq
DB search
MKMVDKIEMSLDDIIKQTKGSRARGSGGGGGRRGRGAGSSPRRGARRPQRPSGGVMRGRS
RGGIARSSLPYTRGDVNSAWKHDMFDGVKKVGRGAIGNAGTTKLLVSNLDFGVSDSDIQE
LFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREMNIQVATSE
LPVTSVRGGPRLSSVNYTQRPQTRFRGNRGTGSIRGRGSGGRRGGRGGTRQVTKTPTAEE
LDAELEAYVKEVK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggtggataagattgaaatgagcctggacgacattatcaaacagaccaaaggg
tccagggcgcgtggcagcggcggtggcggtggtagacgcggtagaggcgccggcagttca
ccccgtcgaggagcacgcagaccacagagacccagcggtggcgtcatgcgaggacgcagc
cgcggtggtattgcacgcagttctctaccgtacacgaggggcgatgtaaacagtgcttgg
aaacatgacatgtttgatggtgtaaaaaaagttggtcgtggtgcaataggcaatgcagga
acaactaaacttttggtgtcaaatcttgattttggtgtatcagattcagatatacaggaa
ttattcagtgagtttggacctttaaaatcagcagcagtacattatgatagatcgggtcga
tctttaggctctgctgatgttatatttgaaagacgggcagatgctatcaaagcaatgaaa
cagtatcatggagtaccactagatggtcgtgaaatgaacatacaagtagctacatctgaa
ttaccagtcacttctgtccgtggtggtccgagacttagcagtgttaattatacacaaaga
cctcagacacgctttagaggaaatcgtggtacaggatctattagaggtcgtggaagtggt
ggtcggcgcggaggcagaggaggcactcgacaagtgacaaaaacacctacagctgaggaa
ttggatgcagaactcgaagcttatgtgaaggaagtcaagtaa
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