Solenopsis invicta (red fire ant): 105197228 Help Entry 105197228         CDS       T03916                                  Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism soc  Solenopsis invicta (red fire ant) Pathway soc04512   ECM-receptor interaction soc04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:soc00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     105197228  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     105197228  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:soc04147]     105197228    00536 Glycosaminoglycan binding proteins [BR:soc00536]     105197228 Exosome [BR:soc04147]  Exosomal proteins   Exosomal proteins of other cancer cells    105197228 Glycosaminoglycan binding proteins [BR:soc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    105197228 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  105197228 NCBI-ProteinID:  XP_011161822 LinkDB All DBs Position 3:complement(25688064..25713311) Genome browser AA seq 1969 aa AA seqDB search MTRLGLRFVASAVCLAGIVTGQLNHTSWANPPPVVPLERGDIGRPTNSSDDDYGGPGWNY LDRGFITDNEGYEDAERRNSSYYSRTGYSPDERTRQWNLYRNRSDPHGQFSSGRSPYDRA PQGYDRYPDSGGASGSGTDENRPGGYPDGHGDYDTYSGAGESERGGSSYNYGQGGSGDSY GSYGGSRGADSYDRGSGSVYSRGRGSGGPVYSGGRGSDDGRGRGYGGHGAPGDDENYPSN YLVVPMPGAPRNCTGSGCCVPKCFAEKGSRGPPGLIGPQGPKGQRGFPGAEGLLGPKGEK GDPGPQGPHGAKGDRGKMGMPGFPGINGIPGVQGSPGSPGLPGRDGCNGTDGERGRDGLP GEPGPRGIRGPSGPKGEKGQPAYAGSFPVGQKGEPGMDGVRGPPGPPGFQGERGLPGPKG ERGPYGSPGIPGQKGEKGNMGLGFEGLKGDKGQKGEAGPPGSTAPIMPFQGTSEVTGPPG EQGYRGDKGEMGPEGQKGEPGFIGDHGIPGGIGMKGEKGLPGAPGIRGRDGFSGPPGPPG RKGDRGIDGLEGLSGRPGKKGEPGRDGPMGVPGLRGPPGPPGGGKGRPGPPGPQGPRGFP GPTGPRGSDGFPGDPGPRGPIGLQGGPGLPGIPGPEGLPGEKGSKGEPGLTGFPGGPGPR GFDGPPGAVGPRGLPGDKGFSIMGPKGMDGTPGLDGEKGQKGERGYAGVRGRPGDSLDGI PGAPGAPGAPGEAGAPGRDGVPGLPGEMGEKGDIGGRCIDCLPGLRGAKGDRGMDGIPGL TGPRGPPGERGFPGESGLDGLPGAIGPPGLAGKDGIPGAPGPQGEPGTPATVTRNMLKLE KGEKGARGEPGRQGPPGPEGPAGEKGRPGFEGFPGLKGTPGDRGFPGQDGVPGRPGTPGR KGEKGLSIKGEPGEPGRPGFSGQKGEPGFYGLKGEPGQCPPLDLMKGFKGDRGLTGDKGE PGPPGFDGLPGDKGLQGFSGPPGAPGPIGAPGPVGPRGLPGPRGDKGNMGPMGFPGEPGR EGPRGFSGAPAPKGEKGEPGISVKGSPGLQGPPGERGEKGLPGPPGKEGLPGYQGLPGFV GEKGDIGAPGINGLPGAPGGKGDTGPIGPPGPPGVAGIPGADGIKGEPGLPGEPGRAGLP GFPGAKGDRGEPGIDGPKGYPGRRGSPGPPGRPGVDGISGLKGERGDKGSPGFPGLPGME GKPGRPGVSGLKGDQGPSGTPGLPGLIGYEGVKGNTGPPGPPGRKGEPGEVSEKGQKGEP GMPGIRGPPGYPGRDGIDGTKGEAGTPGFGRDGLPGEKGESGIPGRSGIPGPQGQKGDTG VRGFPGIKGDFGPPGIPGEPGPPGIDGLPGEVGDVGPVGSPGFPGLDGEIGPPGRPGLAG NKGDRGPSGLAGFPGPPGYIGEKGDRGPPGPTVQVKGEKGEPGIHGLSGSRGEKGDQGLA GIPGYDGEKGDRGVPGLEGSPGPHGAPGPKGELGPPGIPGAPGVTVKGEKGLPGLMGKHG RDGFPGRAGEKGEPGLPGLPGPKGDAGPYGPVGPQGEKGDQGPPGLTGAPGRDGTPGLEG VPGLPGERGSKGDRGPPGEYGAPGLKGESGHPGPSGLDGPPGEKGDRGWDGVNGLPGPLG EKGDRGYPGPEGLMGSVGYEGQKGEKGEDCLEPPIGPKGDRGYPGPAGPSGPPGEKGLPG PPGFPGLDGIKGAQGYIGPPGPVGLPGLPGPVGVPGLPGLQGPVGAPGPVGEPGAPCETT PDYLTGILLVKHSQSQSLPVCEPGHIKLWEGYSLLYTDGDERAHSQDLGYAGSCVRKFST IPFLFCDVNNVCHYASRNDRSYWLSTNSPIPMMPVEETAIEEYISRCVVCEVPANVIAIH SQSISIPECPAGWTGLWIGYSFVMHTGAGAQGGGQSLSSPGSCLEDFRATPFIECNGAKG HCHYYSNQYSFWMVTIEESQQFRSPEKQTLKAGNLRSRISRCQVCIKNT NT seq 5910 nt NT seq  +upstreamnt  +downstreamnt atgacccggttgggattgcgattcgtcgcatccgcagtttgcctggccgggattgttact gggcaattaaatcacacatcatgggcgaatccaccaccggtcgtgccgctggaacgaggt gatatcgggaggcctacaaacagtagcgatgacgattatggcggtccgggatggaattat ttagacagagggtttatcacggacaacgaaggatacgaggatgcggaaaggcggaacagc agttattatagtagaacaggttatagccctgatgaaaggacgcggcagtggaacctctac agaaacaggagcgatcctcacggtcaattttcctcgggccgatctccctatgatcgagca ccgcagggctacgacaggtatcctgacagtggcggcgcatcaggttccggaactgacgaa aatcgaccaggcggttatcccgatggtcacggagattacgatacgtacagcggtgccggt gaaagtgaacgaggaggaagttcttataattacggtcaaggaggttctggcgattcgtac ggcagttacggaggaagtcgtggcgcggattcctatgatcgtggaagcggaagcgtttac agtcgcggtcgtggtagtggtggacccgtttacagcggtggccgaggaagcgatgacggt cgtgggcgcggttatggcggtcacggtgctcccggagatgacgaaaattatccgagcaat tacctagtggtaccgatgccaggagcaccgcgaaactgcaccgggtcaggttgctgcgtg cccaaatgtttcgccgaaaaaggatcgcggggaccaccaggattaattggaccacaagga cctaagggacaacgaggatttccaggagcagaaggacttctaggacctaaaggtgagaag ggagatcctggtccgcaaggtccacatggtgcaaaaggtgacagaggaaaaatgggtatg cctggtttccctggaataaacggtattcctggagtacaaggatctccgggttctccaggc ttgcctggtcgtgatggttgcaacggaacggatggagaacgtgggcgtgatggtttacca ggagaaccaggacctcgtggtatacgaggtccgtcgggacctaaaggagaaaagggtcag ccagcatatgctggctctttcccagttggtcagaagggtgaacctggtatggacggtgta agagggccgcccggtccccccggttttcaaggagagcgcggtttacctggtccaaagggt gaacgaggtccctacggttctcctggcataccgggtcagaaaggagaaaaaggaaatatg ggtcttggatttgaaggattaaagggagacaaaggtcagaagggtgaagcaggacctccc ggttcaaccgcgcccatcatgccgttccagggtacttcggaagtgacaggtccgcccgga gaacagggttacagaggagataaaggtgaaatgggaccggaaggacaaaaaggagaacca ggattcataggtgaccatggtatacctggaggaataggtatgaaaggagaaaagggtcta ccaggagcaccgggcattcgtggtagagatggtttctctggacctcctggacctcccgga cgaaagggtgatcgaggtattgacggattagaaggactttctggacgacccggcaaaaaa ggagaacccggtcgagatggaccaatgggtgttccgggtttgcgaggacctcctggtcca ccagggggtggtaaaggaagaccgggaccaccaggtccgcaaggaccacgtggttttcca ggacctaccggaccgcgaggatcagatggttttccaggagacccaggaccaagaggaccc ataggtttacaaggaggtcctggattgcctggaattccaggtccagaaggtttgccagga gaaaaaggtagcaagggtgaacctggtttgaccgggttccctggaggtccagggccacgt ggatttgatggaccaccaggagcggtgggaccacgaggactgccaggagacaaaggattt tcaataatgggaccgaaaggaatggatgggacgcctggtctggatggggagaagggacag aagggcgaacggggttacgcgggtgttcgaggtcgaccgggagactctctagatggtatt ccaggagcaccaggtgcacccggcgcgcctggagaagctggagcaccaggacgagatggc gtacctggtcttcctggagagatgggagagaaaggagatattggcggtcgttgtatagat tgtttaccgggattgcgaggcgctaaaggagatcgtggtatggatggtatacccggactt actggtcctcgaggaccacccggagaacgcggttttcccggcgaatctggattggatggc ttgccaggcgcaatcggacctccaggactggcgggaaaagatggtatacccggtgctcca ggacctcaaggagaacctggcacgccggcaacagtaacaaggaacatgctcaaactggaa aaaggtgaaaaaggagcacgaggagagcctggccgacaaggtccgccgggaccagaagga cctgcgggagaaaagggtagacctgggttcgaaggtttcccaggacttaaaggaacgcca ggagatcgtggtttccctggacaggatggtgtaccaggaagaccgggtacacctggacgc aagggagagaaaggattaagtataaaaggtgaaccaggagaaccagggcgaccaggattt tcagggcagaaaggagaacctggtttctacgggcttaagggtgaacctggtcaatgcccg ccacttgaccttatgaaaggcttcaaaggtgatcgaggtttaactggcgacaaaggagaa ccaggaccacctggtttcgatggattacccggtgataaaggattgcaaggtttctcgggt ccacctggcgcacctggtccaatcggtgctcctggacctgtaggtccaagaggtttacct ggcccgcgtggtgataagggcaacatgggtcctatgggtttcccaggagaacctggtcga gaaggacctagaggtttctcgggtgctccggctccaaagggtgaaaagggagaaccagga atatcagttaaaggcagtcctggcctccagggtcctccaggtgaaaggggagagaaaggt cttcctggaccaccaggaaaagaaggtttacccggttatcagggattaccagggtttgtt ggtgagaagggagacatcggcgcaccgggaataaatggtttaccaggagcacctggtggg aaaggagatacaggtccgattggtccacctggtcctccaggtgttgctggtattccagga gcggatggaatcaaaggtgaaccaggattaccaggagaaccaggtagagcaggtctccca ggattcccaggagcaaaaggtgatcgcggtgaaccgggtatagatggaccaaaaggatat cctggcagacgaggatcgcctggtcctccaggaagacctggagttgatggtatatcaggt ttaaagggtgaacggggtgacaaaggttcaccaggattccccggattaccgggtatggaa ggaaagcccggtcgtcctggtgtatccggattgaaaggagatcaaggaccatctggtacg cctggtttgccagggctcatcggttatgaaggagttaagggtaatactggtccaccaggt ccaccgggaaggaaaggagaaccgggagaagtttcggaaaaaggacagaaaggtgaacca ggaatgcccggaattcgaggtcctccaggttatccgggacgagacggtattgatggaacg aaaggtgaagctggaacaccaggttttggtcgtgacggattacctggagaaaagggtgaa tcgggtataccgggtcgaagtggaataccaggaccccaaggtcaaaaaggtgatactggt gtacgaggattccctggaataaaaggcgacttcggtccaccgggtatacccggcgaacct ggtccgcctggtatagatggacttcctggagaagtgggcgacgtcggaccagtgggatca cctggcttccctgggcttgatggtgaaattggtcctcctggacggcctggactagctggt aataaaggagatcgcggtccttcaggactagccggatttcctggtcctccaggttatatt ggagaaaagggagatcgtggacctccaggacctacagttcaggttaaaggtgagaaaggt gaaccaggtattcatggactttctggctcaagaggagagaaaggagatcaaggtctggct ggtatacctggttatgatggcgaaaaaggtgaccgaggtgtacctggacttgaaggatct cctggacctcatggtgctcctggacctaaaggtgaactaggacctcctggtattcctgga gctcctggagttacggtaaagggcgaaaagggtttgccaggtctaatgggtaagcacggt agagacggatttccaggacgagccggtgagaaaggtgaaccaggattgcccggtttgcct ggaccaaagggagacgctggtccatatggaccagttggaccacaaggtgaaaaaggtgat caaggaccaccgggtctgaccggagcaccaggacgtgacggaactccaggtctcgaaggt gtaccaggattacctggtgagagaggttcgaagggagatcgaggaccacctggagaatac ggtgcaccaggattaaagggagaatccggtcatccaggaccaagcggattggacggacct ccaggagaaaaaggtgacagaggttgggatggtgtaaatggtctacctggaccactcggt gagaagggtgatagaggatatcctggtccagaagggttaatgggttctgtcggttacgaa ggtcaaaaaggagaaaagggtgaagactgtctcgagccgccaataggacctaaaggagat cgcggatatcctggaccggccggaccgtctggtccaccgggagagaaaggacttccgggt ccgcccggtttccctggcttagatggtattaagggcgcacaaggttacatcggtccacca ggacctgttggactaccgggattgcctggacctgtcggagtgcctggtctaccgggtcta caaggtcctgtcggtgcgccaggacctgtcggtgagcccggtgcaccatgcgaaacgaca cctgactatctcactggtattcttctggtcaagcacagccaaagtcaaagcttgccggtt tgcgagccaggccacattaaactttgggagggatacagtttgctctacaccgacggtgac gagagagcgcactctcaagacttaggttatgccggctcgtgtgtaagaaaattctcaaca atacccttcctgttctgcgacgtcaacaacgtctgccattacgctagtcgcaatgatcgt tcttactggctgtctaccaatagcccaattcccatgatgcccgtcgaagagacggcgata gaagaatatatatccaggtgcgtggtgtgcgaagttccggctaatgtgatagcgatacac agtcaatcgataagcattccagaatgtccggcgggatggaccggtctttggatcggttat agttttgtaatgcacaccggcgcaggtgcccagggcggcggccagtccctgtcgagtccc ggctcctgcctggaggacttccgcgccacaccgttcatcgaatgcaacggcgccaaagga cactgccattactattctaatcagtacagcttctggatggtgaccatagaggagagccag cagttcaggagccctgagaaacagaccctaaaggcgggcaatcttagatcccgaataagt cgctgccaagtgtgtataaagaatacgtaa

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