Solenopsis invicta (red fire ant): 105197370
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Entry
105197370 CDS
T03916
Name
(RefSeq) uncharacterized protein LOC105197370 isoform X1
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soc03400
]
105197370
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
105197370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
105197370
NCBI-ProteinID:
XP_011161981
LinkDB
All DBs
Position
2:complement(13934493..13952443)
Genome browser
AA seq
3094 aa
AA seq
DB search
MSNSLDSFLTRIGDVTIERVTPRSGPKPDEANMMTSETVTSVNMNAEPQATNDESSDESS
GETTDGEQEKKLDVMQSEEIEEIRSEGSGDDMDLDETIDSQIGVRMESERQQHHPSPEED
DEEQVNILDTLPLEGAPIEGQEVSEADLLGKPIKDSEDEESVDNENERTDEQSTGEEGTD
SNKRHADSDHSDSAKKKVKKDDGSTEGSTSECELKTEKKLSNMRRNIREVMDETQLDEAT
LSAQRQEMERLRRVQEQQKIIREVQRQIAINRQNKAQTRVISLLQGKQNQAGSTMISQSS
SSSSPFPSMTSPSSTQVRLPNTVLLKVNSGTGTGAQTTQMSSGMQAGQMQRRSIDGGTRW
QKGRGGYQGAQTSISRVPNRSGAPNMLQQRIRMMTPSVSISPVVPKKEPLDRADYYSDSE
LSDMEAEEAIRCEKQMHAARKMPGASKYQRPPKGKDVVTISSSSESSDDDCIVLSDPSGE
EETDTEDDPSNSGMHTNDRYNIPDEHGRVLINVGHPETEPEVYLAPQVARIIKPHQIGGI
RFLFDNIIETIERYKTSSGFGCILAHSMGLGKTLQVASFCDIFFRCTTAKTVLCIMPINT
LQNWLAEFNMWLPYEDPAITAEKQSKATNVKMEPGTDMKHEIKEESCGNQSDMSNMSRPI
STESAHRFSQDAATAVGVSQQSMNIMSENPYTNPHHGYEQRNMMPSYMQDSTVMNKNMAE
PHVPHMPSNYHQGEMPQNPMYNPNSNTLSNFSDPMKPDPMNCHGMPPGQNMTGPKFGMEN
QTTGVMYPGMENRPQGVPMYPDMETRNAAAIYPGMGNHHPSSMYSNYNNIPGTFASYGSQ
TNQQELVREPKKENMLPGGMPIQNTEVNVKKEPEEMIKKEEGTSVKEELVDEKKETIEKV
KTPYNVDTPIGMTVRPRHFRLHILNDSHKTMTARAKVIQEWQSTGGVLLIGYELYRQLSL
KKPNKAKRKRGQPFKDTVDVEEEDKNKGLLDEMHSALVSPGPDLVICDEGHRIKNSHASI
SMALKQMRTKRRIVLTGYPLQNNLLEYWCMVDFVRPNYLGTKSEFCNMFERPIQNGQCID
STPQDIRLMRYRAHVLHALLEGFVQRRSHSVLQMSLPRKEEYILLVRMTPHQRKLYDTFM
NQVVKTRAVPNPLKAFAVCCKIWNHPDILYYFLRKRQANEEDDLDLEETIAEKVTTGGKK
SKARQPKGESKKTKKGTIKNKPAASVQPNASSSSNNDNAEAENTNNAPKQNNYTNNYTMP
ASNSGYSNSMPQGSYPPHGNYQNYRPNDQNTYYRNDNNNHGEYNHGEFYNNQGQQRYSNQ
PFQSYTQTSTNYNTSQGYANQSQNYMPSNEQSTQRYSGAAAGSDFRSDQNQGNNYEAPGM
FPRQNYPYQDQQRNYTPNLNQGPSNYPQVSNQSTFQSQMPNQSANISMPDYSSYTANQNQ
NYTPTPTQANPMYPRNDAQPLQNSTMGYPASQQGQPPSAQTQTTGYMAPQQNQNISPGQN
RGFSPNQQNQNLGLQNQSHPYASQQSQGVPIQGQAHGYSTQVNPAPPQTPHAFNQQSASM
PPTSSHGYIQPNQSNQGPIPQGSMRGYTPAPQGQINVAQNQTNYPANQPAQNVNAQNQTH
RYSSEQSGQASNPQNAVHSYSHHMIPQTAASNQTSPYPQQNQSGPVIPPSNQAHSGYPPN
HSGTSAMPQNPAHRYGAAQQTQVAQNQPMGYPPNQQQPNPSLSQNDQLYPRSDATVSQQT
QSYAPAANEFSNDRSSANTGNSGNNYTANQPQTQNPVMPNYPSDNTHQNPAAVGQMKGAD
EPYYMQRSYPQTFRPDQQCNDSYYRDQMNSGMNRYPNNYFPTQNYSNQSYDYATGHDTDM
NSRSEESKTLQQPISAHPSGTPCDKSNKDMTSNIGVQSQPLHQNNLAGPPSYIAESNRQS
SATPAPRSGVNPVHSPRLNQSEVTKEDEREKEDQPEKDKEDKSDEEILAKDEEKDCKSSP
IGKEDPGIPYDWATELMKGYVPGLIDASAKMTIFFCILEEAIKLGDRVLAFSQSLFTLNL
IEDFLARNSLKNPDGQTDAWIKNVNYYRLDGSTSALEREKLINEFNSNPKIHLFLVSTRA
GSLGINLVGANRAIVFDASWNPCHDTQAVCRVYRYGQKKPCFVYRLVTDNCLERKIYDRQ
ISKQGMADRVVDQCNPDAHLSLKEATTLSWDWEEDSQVQDFSQIKDSYTDEVMHCVLERH
SSLLTKQPFHHESLLVDRKDKKLSQAEKRLARRGYELEKMAANCSRPSYNYVPGNTATRA
GGLQIRAIRGGDGGPTPKPVASVRPMQQRGAEGLNPRGVTGSRWIPAEVWQRQGMSAQEM
TLPLDVVIPTNSPDKGSIVLKAGQRVMVLKSPKGIYMQLESGKIIAIRTALKLNQQKREE
EPKKGVSSMIQRNSKPEVGFPLRNNSAISIIPKSSSSNQIGGRPLNKSSPSPGYKPFGDK
EISKRPKPVATATAKPYLSQVNLTNQVSLSRLPKVKQEPIDHSTLGDNSNSSDGQLRTEQ
RVEEVRLEDVVAEVSSNTEYSPSNHTRTTNSDTDTSLPKSSEESTQVYTPDTVSLAQSVQ
TQHDQSEPEMPSTADKQRLPSEKEPSKSDTLTNYNRPFHTQAEKRETNDDIIVEETQATS
QMTPQMTSQVTQQVTPQVATQTHVIPSPMTSLLTPQPVSSAMPIPSTMSIPPNLSVPSSM
PPNMPVPSNMPPNLPPSMPVSSNLPPSVPSNMPIPSSMPVSSIPLSMPSSMPSSMPSSIP
SSMLVTSSMSPSIPSSMPIPSSMSISSSIPVSSSISVSSGVSIPSASARGSEAPKSIAES
IANVTSTASVCTSTNITSPKSAEPTPSMRDNMIQSDPTPSVPQGYPYAQYPRYYDYSDPR
SRPLSNPYGTYFPGVPPHTANPRLPDTSKPQPDLGKPMDERNVMNVPTAYSQIPSITAKT
LTSNSATESKGTDNTTVTTTMASSSRDETHIPTAFSHPTSTRYPGPYPPGPYDPYSQHYP
PAPGSSAAYPPGGAPGYPAYGGPSYNTDYARMYSAFHGPPPPTDPYMHRGYAPPSSHPPN
YYSPFPHPPPPYGNYSFLPYPNPNMSSEPQPPTQ
NT seq
9285 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatagtctagacagttttctcacacgcataggggatgtcacaattgaacgtgtg
actccacgcagtggtcccaagcctgatgaagcaaatatgatgaccagtgaaactgtaaca
agtgtaaacatgaatgctgagccacaggcgactaatgacgagagctcagacgaatcgagc
ggtgaaacgacggatggggaacaggagaagaagctcgatgttatgcaatcagaggagata
gaagagatacgctcagagggttctggggatgatatggatctggacgaaacgatcgattcc
cagattggagtgagaatggagtcagagaggcagcaacaccatccgtctccagaagaggac
gacgaggaacaagttaatattctggatactttacctctggaaggtgcacctatagaaggt
caagaagtatctgaagccgatctgttagggaagcctataaaggattcagaagatgaggaa
agtgtggataatgagaacgagagaacggacgaacaatctacaggggaggaaggcactgac
agtaacaagagacacgccgattccgatcattccgacagcgcgaagaagaaagtgaagaag
gatgatggtagcactgagggtagcacgtcggaatgcgagttgaagacagagaaaaagcta
tccaatatgcgaagaaacattcgagaggtgatggacgaaacacaactagacgaagccaca
ttgtccgctcaaaggcaggagatggaacgtctcagacgagtgcaggagcagcagaaaatt
attcgtgaggtacaacgtcagatagcaatcaatcgacagaacaaggcgcagacgcgcgtt
atcagtttactacagggtaagcagaatcaggctggaagcactatgatctcgcagtcgtct
tcctcatcgtcgccatttccgtcaatgacgtcgccgtcgtccactcaagtccgtttgcca
aataccgtactgctgaaagtgaactctggcaccggcactggtgctcagaccactcagatg
tctagtgggatgcaagcgggacagatgcagagaagatcgatcgatggtggtacgcgttgg
cagaagggcagaggcggttatcagggagcgcagacatctatctcgcgtgtcccaaatcgg
tccggtgcgcctaatatgttacaacaaagaatccgcatgatgacgccgtctgtaagtata
tcgccggtggtaccaaaaaaggagccgttggatcgagcggactactattctgattccgag
ttgtctgatatggaagctgaggaagcgatacgctgcgagaagcagatgcatgcagcgcgg
aagatgcctggcgcgtccaaatatcagagaccgcctaaaggcaaggatgtggtgacgata
tccagctcgagcgaaagttcggacgatgactgtatagttttgagtgatcctagcggtgaa
gaggaaactgacactgaggatgatccatctaattccgggatgcatactaatgatcgttat
aacattccagacgaacatggtcgggtattgatcaatgtgggtcatcccgagaccgaaccg
gaagtttatctagcgccacaggtggctcgcattattaagcctcatcagattggcggtata
cgcttcctctttgataatatcattgagacgatcgaaagatacaagactagcagcggcttt
ggctgtatccttgcccatagtatgggtctaggcaagactcttcaagtcgccagcttttgc
gacattttttttcgatgtaccactgccaagactgttctctgcattatgcctataaatacg
cttcaaaactggctggcggagttcaacatgtggttaccatatgaagatcccgctattact
gccgagaagcagtctaaggcgacgaacgtcaaaatggaaccaggaacagatatgaagcac
gaaataaaagaagaaagttgtggcaatcagagcgacatgtctaatatgtcgcggcctatt
agcacagagtctgcgcatcgttttagtcaggacgcagcaaccgctgtcggtgtgtcgcaa
caatcgatgaacatcatgtcagagaatccttatacaaatcctcatcacggttacgaacag
cgcaacatgatgccgagttatatgcaagattctactgtgatgaataagaatatggctgaa
cctcatgtaccacatatgccatcgaattatcatcagggagagatgccgcaaaatcctatg
tacaacccgaattcgaatacactttctaatttctccgatccaatgaagccagatccgatg
aactgccatggtatgccacctgggcagaacatgacagggccaaaattcggtatggagaat
cagactaccggtgttatgtatcctggcatggagaatcgaccgcagggtgttcctatgtat
cccgatatggaaactcgaaacgccgcggcaatatatccgggcatgggtaatcatcatccc
agttcgatgtactccaattacaacaacattcccggtactttcgcgagctacggcagtcaa
acgaatcaacaagaattagtccgagagccgaagaaggagaatatgctgccgggaggaatg
ccaattcagaacacagaagttaatgtgaagaaagaaccggaagagatgataaaaaaagaa
gagggtacttcagtgaaggaagaattagtggatgaaaagaaggaaacgatagaaaaggtg
aaaacaccatacaatgtagatacgccaattggtatgactgtacgcccgaggcacttccgc
ttgcatattttaaatgattcgcataaaactatgacggcgagagcaaaggtgatacaggag
tggcaatcgaccggtggtgttttattgataggatacgaattgtatagacaattgtcttta
aagaagcctaacaaggctaaacgaaaacgtggacaacccttcaaagacacagtagatgta
gaagaagaggataagaacaaaggtctgctggatgaaatgcattcagctttagtgagtcct
ggaccggatttggtaatctgtgacgaaggccatcgaatcaagaattcacacgcgagtata
agcatggcgttgaagcaaatgcgaacgaagcgcagaattgtattgaccggttatccgcta
caaaataacctgctggagtattggtgcatggtagactttgtgaggcccaattatctgggt
accaagagcgagttctgtaacatgtttgaaagaccgattcaaaatggtcagtgtatcgac
tctactccacaagatatacgtttgatgcgatatcgggcacatgtgctgcacgctttgtta
gagggtttcgtgcaaagacgatctcactccgtgttgcaaatgtcattacctcgcaaggag
gaatacatcctcctcgttaggatgacgcctcatcaacgtaaattatatgatacgtttatg
aatcaggtagtgaaaacgcgtgcagtaccaaatccattaaaagcctttgctgtatgctgc
aagatttggaaccatccggacatcttgtactattttcttcgtaagcgtcaggcaaatgaa
gaagatgatttggacctggaagagacaatagcagaaaaagtcacgacgggtggcaagaaa
tccaaagcacgtcaaccgaaaggagagtctaagaaaaccaaaaagggtacgataaagaat
aaacctgcagctagcgtacaaccaaatgcttcttcgtcatccaacaacgataatgcggag
gctgaaaatacaaacaacgctccaaaacaaaataattatactaataattatacaatgcca
gcttctaactcgggatattctaactcaatgccgcaaggatcttatcctcctcatggaaat
tatcaaaactatcgtccgaatgatcaaaatacgtactatagaaacgataacaacaatcat
ggagaatataatcatggagagttttacaataatcaaggacaacaaaggtacagcaatcaa
ccattccagtcatatactcaaacatcaacaaactacaatacgtcgcagggatatgccaat
caatctcaaaattacatgccgtcaaacgagcaatccactcagagatatagtggtgcagcg
gctggctccgattttcggtcggatcaaaatcaaggaaataattatgaagcacctgggatg
tttccacgacagaattatccttatcaggatcagcagcgcaattatacgccaaatttaaat
caagggcctagcaattatccccaagtttctaatcaatctaccttccagtcacagatgccg
aatcaatccgcgaatatatcgatgccggattactcgtcatataccgcgaatcaaaatcaa
aattacacgccgacgccgactcaagcgaatccgatgtatccacgaaatgatgcgcaacca
ttgcaaaactcgacaatgggatatccagcatctcagcaaggtcagccaccgtcagctcaa
acacaaaccactggctatatggcgccgcagcaaaaccagaacatatcgcccggtcaaaat
cgtggcttctcgccaaaccagcagaatcagaatttaggtttgcagaatcaatctcatcca
tacgcgagccagcaatcgcaaggtgtgcctattcagggccaagcacatggatattctacg
caagtgaatccggctcctccacagaccccgcatgcgtttaatcagcagtcggcttcgatg
ccgccaacttcatctcacggttacatacagccgaaccaatcgaatcaagggcccattcca
cagggttcgatgcgcggttatactccggcaccacaaggtcaaataaacgtagcacaaaat
cagactaattatccagccaatcaacccgcacaaaacgtcaatgcacagaatcagacacac
aggtattcttcagaacagtcaggccaggcatcaaatccgcagaatgctgtccacagttat
agtcatcatatgatacctcaaaccgcagcttccaatcagacaagtccatatcctcaacag
aatcagtccggtccggtgataccaccgtcgaatcaagctcactctggttatccgccaaat
cattcaggcacaagcgcaatgccgcagaatcctgcacatcgatacggagctgcgcagcaa
acacaagtggcccaaaatcaacctatgggatatccgccaaatcagcagcagcctaatcca
tctttgagtcaaaacgatcaactttatcctaggtcagacgctacggtgtcgcaacaaacg
cagagttacgctccggcagcaaacgaattttctaatgatcgttcgagtgcaaacaccggt
aattccggcaataattacaccgccaatcagccgcaaacgcagaaccccgtcatgccgaat
tatccatcggataacacacatcagaatccggcggcagtcggacagatgaagggcgcagat
gagccttattatatgcagcgcagttatccgcagacgttccgaccggatcagcaatgcaac
gattcgtactacagagatcagatgaattccggcatgaatcgttatccaaataattatttc
ccgacacagaattattcaaatcagtcatatgactacgcgactggtcacgacacggacatg
aattcgcgatctgaagagtccaagactttacagcaacccatcagtgctcatccttccggt
actccgtgtgataaaagtaataaagacatgacatctaacatcggggtgcagagtcaacca
ttgcatcagaataatctcgccggtccgccaagctacatcgcggaatcgaatcgtcagagt
tcggcgactcctgcgcccagatcaggagttaatccagtgcacagtcctcgattaaatcag
agcgaagtgacgaaggaggatgagagagaaaaagaagaccaaccagagaaagataaagaa
gataaatctgacgaggagattcttgcgaaagacgaggaaaaagattgcaagagctctcct
atcggaaaagaagatccaggaattccatatgattgggcaacagagttgatgaagggatat
gtacccggtttgatagatgcgtccgcaaaaatgactatcttcttttgcattcttgaggaa
gctattaaattaggagatcgcgtacttgcattctcgcagtcgctattcacattgaatctt
atagaagatttcttagcgcgaaatagtttaaagaatccggatggtcaaactgatgcctgg
attaagaatgtgaattattacagactagacggaagcaccagtgcattagagcgagagaaa
ctgatcaacgaatttaatagtaatccgaagattcatctctttcttgtttctacacgagct
ggttcactgggtatcaatcttgtcggtgcgaatcgcgcgattgtatttgatgcttcttgg
aatccttgtcatgatacacaagcagtatgcagagtttatcgatacggccaaaaaaagcca
tgttttgtttatcgattggtcaccgataactgtctagaaaggaaaatctatgatcgacaa
attagtaaacagggcatggcagatcgcgtggttgaccagtgtaatcccgatgcgcatctt
tcgctaaaggaagcaacaacattatcgtgggactgggaagaggacagtcaagtgcaggat
ttctcgcagattaaagatagctatacggatgaagttatgcactgtgtgttagaacgccat
tcctcgttgctcacaaaacaaccgtttcatcacgagagtttactcgttgatcgaaaggat
aagaagcttagtcaagctgagaaacgattggctcgtcgcggctatgagcttgaaaagatg
gcagctaattgttccaggcccagttataactatgttcctggaaatacagcaacgcgagca
ggtggattacaaatcagagcaattcgcggtggtgatggtggtcctacgccgaaacctgtg
gcatctgttagacctatgcaacagcgaggtgctgaaggattaaatccgcgaggtgttact
ggtagcagatggattccggcggaagtatggcagagacagggaatgagtgcgcaagagatg
acgctacctctagatgtagttataccgaccaactctccggataaaggaagtatcgttttg
aaagcgggtcaacgggtaatggtgttgaagagtccaaaaggcatttacatgcagcttgaa
tctggcaaaattatagcaattcgcactgcgcttaaattgaatcagcaaaaacgagaggag
gagccgaagaaaggagtttcctcgatgatacagaggaattctaagcccgaagttggcttt
cccttacggaataactcggctatttccataatacccaaatcatcctcaagtaaccagatc
ggcggccggcctctgaataaatcatcaccgagcccgggttacaaaccgtttggcgataag
gaaatctctaagaggcccaaaccagttgctacagcaacagccaaaccttatttgagtcaa
gtaaacttaactaatcaagtttctctgtcgagactacctaaagtcaagcaagaaccaatt
gatcattctacactgggggacaactctaactcgtctgatggtcaattgagaacagagcaa
cgcgtcgaggaagtcagattagaagacgtagtggcagaagttagctcgaatactgagtat
agtccctctaatcatactcgtaccactaattcggatacggatacatccttgccaaaatcg
tccgaagaaagcactcaggtttacacgcctgatactgtctctcttgcgcaaagtgttcag
acacagcatgatcagtctgaaccagaaatgccgtcaaccgctgacaaacaacgtttgcca
tcggagaaagaaccttctaaatccgatacattaacaaactacaatcggccattccatact
caagcggagaagcgagagaccaatgatgatatcatcgttgaagaaactcaagcgacatcg
cagatgacgccacagatgacgtcgcaagtgacacagcaagtgacaccacaagtcgcgaca
caaacgcacgtaattcctagcccaatgacttctctgttgacaccgcaaccagtatcttcg
gccatgccgataccatcgaccatgtcgataccgccaaacttatcggtaccatcaagtatg
cctccgaatatgccagtaccatcgaacatgccaccaaacttaccgccgagcatgccagta
tcatcaaacttgccacctagtgtaccatcgaacatgccgataccctcgagtatgccggta
tcgagtataccgctgagcatgccatcaagtatgccatcgagtatgccatcaagtattcca
tcgagtatgctagtaacatcaagcatgtctccaagcataccgtcgagcatgccaatacca
tcaagtatgtcgatttcatctagcataccggtatcgtcgagcatatcagtatcgtctggt
gtatcaataccatccgcgtctgcaagaggttcagaagcacctaaaagtatcgccgaatca
attgcaaacgtgacatcgaccgcttccgtatgcactagcaccaatatcacttctccgaag
agtgctgagccaactccgagtatgcgagacaacatgatccagagtgatccgacgccgagc
gtaccccagggatatccctacgctcagtacccgagatattacgactatagcgatccgcga
tcccgtccgctttctaatccctatggcacttacttcccaggcgttccaccacacacggca
aatcccagactgccagacacgtcgaaacctcaaccggacctaggcaaacctatggacgag
aggaacgtgatgaacgtgcctactgcttattctcaaataccgagcattactgccaaaacg
ttaacgagcaactctgcgacggagtctaagggtacggacaacacgacggtgactactacg
atggcctcatcgagcagagatgagacacatatacctaccgcatttagtcatcccactagc
acgcggtatccaggaccatatccaccgggcccgtacgatccatactcacagcattatcca
ccagcgcctggctcttctgcagcttatcctccaggtggagcacccggttatccagcatac
ggtggacctagctacaatacagattatgcccgtatgtactcggcgttccatggtccgcca
cctccaacggatccctacatgcatagaggatacgctcctccctcttcgcatccccctaat
tactattcgcccttcccgcatcctccaccaccttatggcaattattcgttcttgccgtat
ccaaatccgaatatgtctagcgagcctcaaccacccactcagtag
DBGET
integrated database retrieval system
