Solenopsis invicta (red fire ant): 105197495
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Entry
105197495 CDS
T03916
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X2
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105197495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soc04121
]
105197495
Enzymes [BR:
soc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105197495
Ubiquitin system [BR:
soc04121
]
Ubiquitin ligases (E3)
HECT type E3
105197495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WD40_RLD
RCC1
RCC1_2
Alsin_RLD
LAIKA
Motif
Other DBs
NCBI-GeneID:
105197495
NCBI-ProteinID:
XP_011162200
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All DBs
Position
2:16048105..16056946
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AA seq
1052 aa
AA seq
DB search
MFGWGSTIHGELGLGGIEEENIFIPRKVDFSEANDVEQIACGENYSVTVTKNGQVYSCGN
NDYGQLGHEKARKRLQLIPGLDAFVFKKVACGNCHTMAVNEWGQLFSWGCNMSGQLGLDT
VMCMERTPRMVKVLGTSVIVQIACGVEHSIALTNDGDLYAWGSNRDGQLGLGSDVEAEIK
PKRIIALEAVPIAFIACGGYHTVVISKSGAVFSWGRNTFGQLGLNDRKVRKLPCQLRTLR
NSKVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNNTNDILPRQVMELMGSTVTQIS
CGKKHTLALVPSRGKVYAWGLGGTGQLGNRASQSATTPQVVLGPWSSPSGSSVMLDQHYS
KIDCIVRHIFSGGDHCFATISLKKDNIEPDDCRILEPASQILTITEDKLGDCQKILPGSP
INHDLMTYLETVFKSQACINSSFLLSGDAHYGCSSKHHGVNFDYAIKLFGIISELDNNTI
QELIFTCVTENLIPSFRDNPPDVESLRVYLTLPLYHRFANLSNYSSLQTPFCKALFNLKP
EACRVIGQWWSAAPSYYFERLVRMYKSVVLHFVKQSTPEKLVTWSESLEYALRLLTLLNK
LNVTGTRGVRVPYETFHLPELSEYVEIRRDYFKWLTESDQSYYRKIYFCNYPFLFDAEAK
TTLLQTDQSIQMQTAMNEAMSRVIRDVMLGTALVDCNAQTYSQFVHLHVSRNDIVNDTLR
QLFLYDARELKRPLRVKFRDEEAEDVGGVRKEFFMLLFTEILDFKYGMFKEYEETRTIWF
NSDSLEEEVMFSLIGVLCGLAIYNFVIINLPFPLVLYKKLLGESVGLNDIKALSPTIARS
LESILEYNESDFEEVFCLNFEVSREVFGEMKNFELIPGGNKVPVTLRNKQQYVDLYVDYM
LNKSVEMQFNAFHKGFHDVCGGRMLELFHSHELMSLLIGNENYDWEELEKNADYKEGYTK
NDPTIILFWQVFHELPLDEKKKFLLFLTGSDRIPIQGMKAIKLTIQPMTDERYLPAAHTC
FNLLDLPRYQTRERLKYKLLQAIQQNQGFSLV
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttggggtagtactattcatggtgagctgggtttgggtggtattgaggaagag
aatatcttcataccacgaaaagtggatttctcagaagcaaatgatgttgagcaaattgct
tgtggggaaaattattctgtaactgtgacaaaaaatggtcaagtgtactcctgtggtaat
aacgactatggacaacttggccacgagaaagcgaggaaaaggttacaactaatacctggt
ctggatgcatttgtatttaaaaaagtagcatgtggcaattgtcatactatggctgtgaat
gagtggggacaacttttcagttggggttgtaatatgagtggtcaactaggattggataca
gtcatgtgtatggagcgtactccacgtatggtaaaagtattgggtacaagtgtgatagta
cagattgcatgtggcgtagaacattcaattgcactgacgaatgatggagatctatacgca
tggggtagcaatagagatggacaactaggattaggatctgatgtagaagctgaaatcaaa
ccgaagaggattattgcattagaggccgtaccaattgcatttatcgcatgtggcggttat
cacactgtagtcatatcaaagtcaggagctgtattctcgtgggggagaaacaccttcgga
caattagggctaaatgataggaaggtgagaaaattaccatgccagttacgtactctgaga
aattcgaaagtatgctatgcagcctgtggcgaggaattttctgtgttcttgacgatggat
ggtggagtatttacatgtggtgctggaatgtatggccaattaggtcatgggaataatacg
aatgatatcttaccgcgacaagttatggagctgatgggcagcaccgtaacacaaatatct
tgcggcaaaaagcacacgttggctttggtgccgtctagaggaaaagtttatgcatggggt
ttgggaggtaccggacaattaggtaatcgtgcttcgcaaagtgctacaacaccacaagtc
gttctagggccatggtcttcgccgagtggatcgtcagtgatgctcgatcagcactacagc
aaaatcgactgtattgttaggcatattttcagtggaggcgatcactgttttgccacaatc
agtttgaaaaaagataatatagaaccagatgactgtagaatattagagccggcttcccaa
attcttacaataacggaggacaaactaggtgactgtcagaagatcctaccaggttcacca
attaatcacgatttaatgacgtatctagaaactgtattcaaaagtcaagcgtgtataaac
tcgtcctttttgctcagtggtgacgcacattatggttgttcgagcaaacatcacggggtt
aattttgactatgcgatcaaattattcggaattatttcagaactggacaacaacacgatt
caagaactgattttcacatgcgtaactgagaatttgataccatcatttagagataatccg
cccgatgtggagtcattaagagtgtacttaacgctgccgctatatcatcgctttgcgaat
ctatcaaactacagttctctgcaaacgccattctgcaaggcgctgttcaatctgaagcct
gaggcgtgcagagtcataggccagtggtggagcgcagccccgtcgtactactttgagaga
ctcgtgagaatgtacaaatctgtggtgttgcattttgtaaaacagtcaacgccagagaag
ctggtcacatggtctgaaagcctagagtatgctctacgactgttaacgctattaaataag
ctaaatgtcacaggtacacgaggtgtacgagtaccttatgagactttccatttgccggaa
ttatcagaatatgtagaaattagacgcgactatttcaaatggctgacagaaagtgatcag
tcttattatcgtaaaatatacttttgtaattatcctttcctatttgacgctgaagcgaaa
accacgttgctccaaaccgatcaatctatacagatgcaaactgcgatgaatgaggcgatg
tcccgagttataagagatgtgatgcttggtacagctttggtagactgtaacgctcagact
tacagtcaatttgtacacttacatgtatcacggaatgacatagtcaacgacactttacga
cagttgtttttgtatgatgctagagagctaaagagaccgcttagagtcaagtttcgtgat
gaagaggctgaagatgtcggtggtgtgagaaaagagtttttcatgcttcttttcacagaa
attcttgattttaagtatggtatgttcaaggaatatgaagagacgagaactatctggttc
aactcggactcgttggaagaagaagtcatgttttcgctgattggcgttctctgcggtttg
gccatatataattttgtaattattaacttaccatttccgttagtgttgtacaagaaactc
ttgggagaatcggtcggactaaatgatatcaaggcattgtcaccgacaatagctagaagt
ttagaaagtattcttgaatacaatgaatcggactttgaggaagtattttgcttgaatttt
gaagtaagcagggaagtgtttggcgagatgaaaaacttcgaattgatacccggtggtaat
aaagttcctgtaacattaagaaataagcaacaatatgtggatctttacgtggactatatg
ttaaacaagtcggtagagatgcagttcaatgcgtttcacaaaggctttcatgatgtatgc
ggtggaagaatgctagagctgtttcacagtcacgaactgatgtcgcttctgatcggcaat
gagaattatgattgggaagaattggagaagaatgccgattacaaggagggctataccaaa
aacgatcccactattatactcttctggcaagtctttcatgaactgccgttggatgaaaag
aagaaatttctacttttcttaacgggtagcgacagaattcctatacagggcatgaaagct
ataaaattaacaatacagccaatgactgacgaacgttatctacccgccgcacatacgtgt
ttcaacctgcttgatttgccgcgttatcaaactcgcgaaagattaaaatacaaattgctg
caagctatccaacaaaatcaaggattctcgcttgtgtga
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