Solenopsis invicta (red fire ant): 105197589 Help Entry 105197589         CDS       T03916                                  Name (RefSeq) protein CLP1 homolog   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism soc  Solenopsis invicta (red fire ant) Pathway soc03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:soc00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     105197589  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:soc03019]     105197589 Enzymes [BR:soc01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      105197589 Messenger RNA biogenesis [BR:soc03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      105197589 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N CbiA ATP_bind_1 MMR_HSR1 AAA_16 AAA_22 nSTAND3 CTV_P13 AAA_18 Motif Other DBs NCBI-GeneID:  105197589 NCBI-ProteinID:  XP_011162350 LinkDB All DBs Position 1:complement(27896725..27900367) Genome browser AA seq 422 aa AA seqDB search MADEKSTVQEFKLDPDCELRFEVESKNEKVTLELKNGLAEVFGTELVKGKKYEFTAGAKV AVYTWQGCTVELIGKTDVSYVAKETPMGLYLNCHAAMERMRETAEKDDTRGPITMVVGPC DVGKSTLCRILLNYAVRMGRRPIFVDLDVGQGHIAIPGTVGALLVERPSNIVEGFSQQAP LVFHYGHKSPQTNVALYNLLVTRLAEVCSDRLQANKKAKASGIVINTCGWVKGDGYKLLT HAAQAFEVDAILVLDQERLYNELVRDMPDFVKVVFLPKSGGVVERSAAQRTEARDQGVRE YFYGSRTPLYPHSFEVKWSEARLYKIGAPVLPASCMPLGMKAEDNLTKLVAVTLGPSLLH HLLSVSFADSPEDDVVQTNVAGFVCVTNVDVERQTFTVLSPQPRPLPNTVLLLSDIQFMD SH NT seq 1269 nt NT seq  +upstreamnt  +downstreamnt atggccgatgaaaaatctacggtgcaagaattcaagttggatccggactgtgaactgaga ttcgaagtagagagcaagaatgaaaaagtcacattggagttaaagaatggtctggcggaa gtttttggtacagaattagtgaaaggaaagaaatacgagtttaccgctggtgcgaaagtc gcagtttatacttggcaaggttgtactgtcgaattaattgggaaaacagacgtcagctat gtggcaaaggagacgcctatgggtttgtatttgaattgtcatgcggcgatggaacggatg agagaaacagcggagaaggatgacaccagaggtccaataacgatggttgttggtccttgc gacgtgggaaaatctacactttgtagaatactattgaattacgccgttaggatggggaga agaccgatcttcgtcgatcttgacgtcggtcagggacacatagcgatacctggcactgta ggtgctttattggtagaacgaccgtccaacatagtggaaggtttcagccagcaagctcca ctagtgttccattatggacataaatcgccacagaccaatgtagcgttgtacaacctactt gtaacgcgtttggcagaagtctgctctgacagattacaagccaacaagaaggccaaagca tcagggatcgttataaatacgtgtggctgggtcaaaggagacgggtataagttacttacg catgccgcacaggcgttcgaggtggatgcgattctggtactagatcaggagagactctac aacgaattggtgagagacatgccggacttcgttaaggtggtctttttgccgaagagtggc ggagtcgtcgagagaagcgcggcgcaaagaaccgaagcgagagatcagggtgttagggaa tatttctatggttctcggactccgttgtatccacatagctttgaggtgaagtggagtgaa gcgagattatataaaatcggtgcaccggttctaccggcatcctgtatgccattaggcatg aaagcggaggacaatcttacgaaattggtggccgttacattgggacccagtttgctccat cacttgctgtccgtttccttcgccgattctcccgaggatgatgtcgtacaaactaacgta gctggattcgtctgtgtgactaacgtggatgtcgaaaggcagacatttacagtacttagc ccacaacctaggccactaccaaacacggtgctattactgtcggatatacaatttatggat agtcattag

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