Solenopsis invicta (red fire ant): 105197652
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Entry
105197652 CDS
T03916
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105197652
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GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
105197652
NCBI-ProteinID:
XP_011162425
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All DBs
Position
10:19193721..19204760
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AA seq
1802 aa
AA seq
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MLHAHYGHVALAALIILLITLAGPVSSQHGRGDKVPSRGSVQRGDMSPLEVVTERHNWLG
PTISKSRGLYAKRPHPCEQSSCYPATGNLLIGRKDKLSASSTCGLHGPERFCIVSHLKDR
KKCFFCDTSIPKQQHNIENIVSGSWWQAENGVEDVTIRFDLEAEFHFTHIIIRFQTFRPA
AMLIERSYDFGETWQVYRYFAHNCEHYFPEIPTHQPQRLTDVICETRYSAVAPSTGGDVI
FRVLPRNLEIDNPYSKEVQNLLKVTNLRINMTGLHTLGDDLLDERPEIREKYYYAIQDMV
IRGSCSCYGHASRCLPLPGVADEENMVHGRCECTHNTKGLNCENCEDFYNDLPWKPAVGK
QTNACRPCNCNNHTNSCHFDETVYERSGRVSGGVCDDCQHNTRGQNCEQCKPFYYHDVTK
EISDREACQPCDCDLSGSLDDGICDSRTDPLSGDESGRCHCKANVDGRRCDRCKNGFWNF
DPDNPEGCQACTCNTLGTIDNQGCNVVTGECTCKRYVTARDCNQCLPEYWGLSEDRDGCK
PCDCDPGGSYENSCDVITGQCRCRPHVSGRTCNQPEQSYYTGSLDFLIYEGELSRATDNC
QVVIREPYRDGRNSTWTGTGFMKALEGSILNFTIDDVRRSMWYDVIVRYEPVQLGVWEDV
QIILERDGSPDPNGPCADWRPEYDRLWVQLPLRSRSAMAQPSICLEAGKRYNLLLQFRKF
NSHVDTPLASILVDSIVLKPRIDVIPFFKTPGLGELRRQEYESYHCNELSNDVNSVWSNV
PEICKKYQNSIGYYVFDGAHSCECNPTGSRSLLCENYGGMCPCKPNVVGRRCDRCAPGTY
GFGPEGCIPCDCDGVGALDNFCDVETGRCKCRPNTYGRTCGQCEPGFWNFPHCQRCECHG
HADSCDSKTGACANCRDFTTGHNCDRCVDDFYGDPRIGVDIPCRACPCPGTRESGHSYAN
SCSLDSITQDVVCECFEGYSGPRCEHCAENYFGNPEVPGGSCQFCNCNNNTDLRRAGNCD
PHTGHCLQCLFNTDGSTCEVCKAGFYGDALRQDCLDCRCNVLGTDKTAGPCNHRTGQCPC
LPHVIGQLCDSCEENHWKIASGQGCDPCECDVVGSISDRCNPYDGTCECRSGFGGRRCNE
CQSNFWGNPNVECYPCECDVIGSASQQCDRETGVCICHKGIGGEKCDQCDRGYHGEAPQC
SPCGECFDNWDLILDGLRNKTNAVIQEASRIQKVGTTGVYSQEFDNMEETLNEVRDLIGN
TTIRSQDLDALDDLADELTNNISKSEKLLAETNNRLENLNQRVSLNDVALKKLKNRTNNL
DEAAADLRENATRLQEENVLGALNVTQQMAEQSRQAEKMANDTTNVLSDAERFRKHTENL
LAKNRASVDEAQERNKESLMKLNEKLKTFGTAMPELNLRMCGNNVTDCSTVCGGAGCGFC
GGLSCHAGAVSKANQALDVAKQQAAKIKSHKDEAEQLLRNMSQIKQDATAARSNAQDAFN
YAWEARNRSDKITEDVSDITKRIWSILDEDQPTPAMVRDLAYEVLAKNIQLEPDEITQLA
DRIKSIVGSLTDSEKILADTKDDLERAHVLEERANRAKEMAIEKQALANKIILLLNEAQK
AQHLAQDAIDKAEDDVSKSQKDLADIADVTKAAQTQANSTTQSVEALDVRLKQLQTQSAK
NSFILTEIGTEAKKVADEAQVTDGKTKKLSEEYKRADELLNQRVNKTKGDIQRAKRLLQR
ASELTADTSTKSKDLDGMESVYKDNERLLTDLMSEVDALTMEMERHLAEIEKKSQLYRQC
SA
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacgctcattatgggcatgtggctctcgcagctttaattattttacttattact
ttagcaggacctgtgagctctcaacatggacggggcgacaaagtaccatccagaggatcg
gtgcaaagaggagatatgtcacccctggaggtggtgacggaacgtcataattggctaggg
ccgaccatttccaagtcaagaggattgtatgcgaaaagaccgcatccctgcgagcaaagc
tcgtgttatcccgcaaccgggaatctgctgatcggtcgtaaggacaaactgagcgcttcg
tcgacgtgcggtctccatggtcccgaaagattctgtatcgtttctcatctcaaggataga
aagaaatgcttcttctgcgatacgtcgatacctaaacagcaacataatattgagaatatt
gttagcgggtcgtggtggcaggctgaaaacggagtggaggatgtcacgatacgttttgat
cttgaagcggagtttcactttacgcacattattattcgtttccaaacttttcgaccagct
gccatgttgatcgaacggtcctacgattttggagaaacctggcaagtatatcgatacttt
gcccataattgcgaacactacttccccgaaattccgactcatcaacctcaaagattaacg
gacgtcatctgcgagacgagatactcggctgtggcaccatccactggcggtgatgtaatt
ttcagagtgttgccgcgaaatttggaaattgacaatccctactcgaaggaagtgcaaaat
ctactaaaggtgaccaatcttagaatcaacatgacgggactccacactctgggcgacgat
ctgctcgacgagcggcccgaaattcgcgagaaatattattacgccatccaagacatggtg
attcgtggttcgtgctcctgttatgggcacgcttccaggtgtttaccgttaccaggagtc
gccgatgaagagaacatggtccacggcagatgtgagtgtacgcacaacactaaaggcctc
aattgcgagaattgtgaggatttctacaacgatctgccgtggaagcctgcggtcggtaaa
caaaccaacgcctgtagaccgtgtaattgcaacaaccataccaattcctgccatttcgac
gaaacggtctacgagagatcgggcagagtgtccggcggagtctgtgacgattgccagcac
aatacgcgaggacagaattgcgaacagtgcaagccattttattatcacgacgtaacgaag
gaaatttctgaccgagaagcttgtcaaccttgcgactgtgacctaagtggatccttggac
gacggcatatgcgactcgagaactgatcctctaagtggtgacgagtccggacgttgtcac
tgtaaagcaaatgttgacggacgtcgttgcgatcgttgcaaaaacggcttctggaacttt
gatcccgacaatcctgagggatgtcaggcctgcacctgtaataccttgggtaccatcgac
aatcagggttgcaacgtggtgaccggcgagtgcacgtgcaaacggtatgttacggcgcgc
gactgcaatcaatgtttgccggaatattggggactttccgaggaccgtgatggatgtaaa
ccttgcgattgcgatcccggcggttcttacgagaattcctgcgacgtcatcactggtcag
tgcagatgcaggccacacgttagcggaaggacttgcaatcaaccggagcagagttactat
accggctcactagactttcttatttacgaaggagagttatctagagccaccgacaattgt
caagtggtgatcagagaaccttatcgcgatggtaggaacagcacttggaccggcacgggt
ttcatgaaggctctcgaaggatcaatattaaacttcaccattgacgacgttcgcagatcg
atgtggtatgacgtgattgtacggtacgagccagtgcaactgggcgtttgggaggacgtg
cagattattctcgagagagacggttctccagatcctaatggaccgtgcgccgattggaga
ccagaatacgatcgcctatgggttcaattacctttgcgttcgagaagcgccatggcgcaa
ccgtccatatgtttagaggcaggaaaacgttacaatcttctgctgcaattccgcaagttc
aacagccacgtggacacacctttggcctccatcctggtcgactcgattgtactgaagccg
agaatagacgtgatacctttcttcaagactcctggtctgggcgaattgcgtcgtcaagaa
tacgaaagttatcattgtaacgaactgtccaacgatgtcaacagcgtgtggagtaacgta
cctgaaatctgcaaaaagtatcaaaacagcatcggctattacgtcttcgatggcgctcat
tcttgcgaatgtaacccaacgggctctcgtagccttttgtgcgaaaactacggcgggatg
tgcccatgcaagccaaacgtggttggcagacgttgcgaccgttgcgcaccgggaacctac
ggattcggcccagagggatgcatcccttgcgattgcgatggcgttggcgccctcgataat
ttctgcgacgtcgaaaccggccgttgcaagtgccgtcccaacacctatggcaggacctgc
ggtcagtgcgagcctggcttttggaactttccgcattgccagcgctgcgagtgtcatggc
cacgcggacagctgcgactcgaagaccggggcatgcgccaactgccgagatttcaccacc
ggacataattgtgaccgttgcgtcgacgatttctacggcgatccacggattggcgtggat
ataccttgcagagcgtgtccttgtccaggcacacgtgaatccggacactcctatgccaat
agctgctcattagactcaataacgcaagacgtagtgtgcgagtgcttcgagggatactcc
ggaccccgttgcgagcattgcgccgagaattattttggcaatccggaggtaccaggcggt
agctgccagttttgcaactgtaacaacaacacggacttgcgtcgcgccggtaactgtgat
ccgcataccggtcattgtctccaatgtttgttcaacaccgacggctctacttgcgaggtg
tgcaaagcgggattctacggagacgctttgcgacaggactgtctagactgcagatgcaac
gttctaggcactgacaagactgcgggaccgtgcaaccatcgtaccggacagtgtccgtgt
ttgccacatgtcattggacagctttgcgactcctgcgaggagaatcattggaagatagcc
agcggacaaggctgcgacccttgcgagtgcgacgtcgttggaagtatttcagatagatgc
aatccttacgacggcacttgcgagtgcagatcaggttttggtggtagacgatgcaacgag
tgtcagtcaaacttctggggcaatccaaacgtcgagtgttacccgtgcgaatgtgacgtg
attggttccgcgagtcagcaatgcgacagggagactggagtatgcatttgccacaagggt
atcggcggcgagaagtgcgaccaatgtgaccgtggttatcacggcgaggctccgcaatgc
agtccatgcggtgaatgcttcgacaattgggatttgatcctggacggtctaaggaacaag
acaaacgcggtgatacaggaggcttcgaggatacagaaggtcggcacaacgggtgtctat
agccaggaattcgacaacatggaggaaacactgaacgaagtgcgggacctgatcggcaac
accaccatccgaagccaagacctagacgcgttggacgacttggctgatgaattgacgaat
aatatctcaaagtcagagaaactgttggccgaaacgaacaatcgcttggagaatctcaat
cagcgagtcagtcttaacgacgttgcgctgaagaagttaaagaacagaaccaacaacttg
gacgaggccgctgccgatttgcgagagaatgccaccaggttgcaagaggagaatgttctg
ggtgctctaaacgtgactcagcaaatggccgagcagtccaggcaggccgagaaaatggcg
aatgacactacgaatgttctcagtgacgcggaacgattccgcaagcataccgagaacctc
cttgcgaagaatcgtgcctccgtggacgaagcccaagagaggaacaaggaatcgttgatg
aagctgaatgaaaagctcaagacattcgggacggcgatgcctgaattgaatctgcggatg
tgcggcaacaatgtgacggattgtagcaccgtctgcggtggagcgggctgcggcttctgc
ggaggattatcctgtcacgcgggtgcagtcagcaaggccaatcaagctctggatgtcgcc
aagcagcaagctgctaagatcaagagccataaggatgaagccgaacagttgttacgcaat
atgagtcaaattaagcaagacgcgacagcagcgagatccaacgctcaagatgctttcaat
tatgcgtgggaagcgcgtaaccgctctgataaaatcaccgaggacgtctcggacataacc
aaacgaatctggagcattctggatgaggatcaacctacgccagccatggtgagagacctc
gcgtacgaagtgctcgcaaagaacatccagctggaaccggacgagatcacgcagttggcc
gatcgtatcaagagtatcgtgggctctctcactgactccgaaaagattctcgccgatacc
aaggacgatctagagcgggctcacgttctcgaggaacgcgccaatcgtgccaaagagatg
gccatcgagaagcaagccttggcgaacaaaataattctgctgttgaacgaggcgcagaag
gcgcaacatttggcgcaggatgcgatcgataaagcggaagatgacgtgtccaaatcgcag
aaggatctcgcggacatcgccgacgtgacgaaggccgctcagacccaggctaacagcacc
acccaatcggtggaggctctggatgtccgtttgaagcagcttcaaacgcaatctgcgaag
aacagttttatcttgacggagattggcacggaggcgaaaaaagtcgccgacgaggcgcaa
gtgaccgacggcaagacgaaaaaattgtcagaggagtacaagagggcggacgagttactg
aatcagcgggtgaacaaaactaagggtgatatccaacgggcaaagagactcttgcagcgt
gcctcggagttgacggcggacacgtcgaccaagtccaaggatttggacggcatggagagc
gtctacaaggataacgagcggctgctaacggacctgatgagcgaggtagacgcgctgacg
atggagatggaaagacacctggcggagatcgagaagaagtcacagttgtacagacagtgt
tctgcttaa
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