Solenopsis invicta (red fire ant): 105197753
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Entry
105197753 CDS
T03916
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soc03041
]
105197753
Enzymes [BR:
soc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105197753
Spliceosome [BR:
soc03041
]
Complex C
Other components
Complex C specific factors
105197753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
ABC_tran
nSTAND3
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105197753
NCBI-ProteinID:
XP_011162569
LinkDB
All DBs
Position
10:complement(17610161..17619959)
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AA seq
683 aa
AA seq
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MFRPLFSKPGDNTWQEDKPDIDAHSSTQFVYNAHHSLALDMQRQRLPIFKNKDHIIYLLE
KYQTLVLVGETGCGKSTQIPQYLLEAGWCGDGKKIGITEPRRVAATSLANRVADEHNCIL
GTTVGYCIRFDDYTDETTKIKYMTEGILLREMMNDPLLTSYSVIILDEVHERTLLTDIIM
GLLKKIIRKRKSLRVIVSSATVDAEELRDFFNINTTKDSSKDSAVIMSVEGRLYPVDVFF
LKEPVANYINGVVDTVLKIHETEESGDILAFLTGLDEVDQAVSLLSEHAKLIKDDKQKLL
PLPMYGSLPNAEQLKVFWKAAKDTRKVIVATNIAETSITIPNIVYVIDCGFVKIPWFEAE
TQTNSLVIVPVSRASANQRAGRAGRVRTGKAFRLYTEEAYTELFEATPPEMQRSDLAPAI
LQLKALGIDNVLRFNFPSAPPSKNLVIGLELLYALGAIDSNGDLTTPLGLTMAEMPLEPV
LAKSLIASGEMGCSEEITTIFAMLQVQNVFIQPGGGQAALKARIAHRKFEVEEGDLFTLL
NVYTAFEQNKTPAWCQKHFLNHKALRRVMEIRVQMHKMLKRLDIPLVSCNGSVQQILKCL
AAGLFPKAAYLHYTGTYRTVRGNKDLYIHPNSCLYTLQQPQWLLFCEILQTNKTYMKDLT
VIQPEMLLEAAPHFYERTSIDSI
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggccacttttctccaagccgggagataacacttggcaggaggataaacctgat
atcgatgcccattcgtctacacaatttgtttacaatgcacatcattcactggcacttgac
atgcagcggcaacggctgcctatattcaagaataaagatcacattatttacttgttggag
aaatatcagaccttggttttggttggtgaaacaggctgtggtaaaagcacccaaatccct
cagtatcttctcgaagcaggatggtgtggagatggaaaaaaaattggtatcacggaacct
agaagagtcgcagccacctctctggcgaatcgcgtggccgacgaacacaattgtattcta
ggaaccaccgtgggttattgcatacgcttcgatgattacactgatgaaacgactaagatt
aagtacatgaccgagggtattcttctaagggaaatgatgaacgatccattattaacaagc
tactcggtcattatcctagacgaagtgcacgaaagaacactcttgactgatatcataatg
gggctgctgaaaaaaataatcaggaaacggaagagtctaagagttatcgtctcgtcggcg
acggttgacgcggaggaacttcgagatttctttaacataaatacgacgaaggactcgagt
aaagatagcgcggttatcatgagcgtcgaggggcgattatatccggtagatgtatttttt
ctgaaagagccggtcgcgaattatattaacggcgtagtagacaccgttctaaaaatacat
gaaactgaagaatcgggcgatatcctggcatttctcacaggactcgacgaagtcgatcaa
gccgtctctcttttatcggaacacgcaaaacttataaaagatgataaacagaagctgctt
ccgttgccgatgtacgggtcgcttccaaacgcggaacagcttaaagtattctggaaggct
gctaaagatactcgcaaagttatcgtggcaactaacatcgcggaaacgtcaattactatt
ccaaatatcgtttacgtaatcgattgcggtttcgtcaagataccttggttcgaagcagaa
acacaaacgaatagcctcgttatcgtgcccgtatcgagagcttccgccaaccagcgagcc
ggtcgcgcaggtcgcgtacgtactggaaaagcatttagattatacacagaagaggcttat
actgaattgttcgaggctactccaccggaaatgcagcggtcagatttggcaccggcgata
ctgcaattaaaggctctgggcatcgataatgtattgcgatttaattttccatctgcgccg
cccagtaaaaatctagtcataggattggaattgctctacgcgttaggtgcaatcgatagt
aatggagatttgacgacaccgttaggtctgacgatggcagagatgcctttggaaccagtg
ttagcgaaatctttaatcgcttctggtgagatgggatgctccgaggaaatcacgacaata
ttcgccatgctacaagttcagaacgttttcatacaacctggtggagggcaagcggctcta
aaagcgagaatagcacatcgcaaattcgaggtggaagaaggagatcttttcactttacta
aacgtctatacagcttttgaacagaataaaacacctgcctggtgccagaaacattttctc
aatcacaaagctttgcgaagagttatggaaattcgcgtacagatgcacaaaatgctcaaa
cgtttagacattccactggtatcttgcaatggtagtgtccagcaaatccttaaatgttta
gctgccggtctctttcctaaagcagcatatctgcattatacgggcacatatagaacggtt
cgaggcaacaaggatttgtatattcatccgaatagttgcttatatactctacagcagcca
caatggttactattttgcgaaattttgcaaacaaataaaacttacatgaaggacttgact
gttattcagccagaaatgttgttggaagcggcaccacatttttatgagagaacgtccatt
gattctatttaa
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