Solenopsis invicta (red fire ant): 105197770
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Entry
105197770 CDS
T03916
Name
(RefSeq) Fanconi anemia group J protein isoform X2
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03440
Homologous recombination
soc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105197770
03460 Fanconi anemia pathway
105197770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soc03400
]
105197770
Enzymes [BR:
soc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105197770
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
105197770
FA (Fanconi anemia) pathway
Downstream FA components
105197770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
Stonustoxin_helical
Motif
Other DBs
NCBI-GeneID:
105197770
NCBI-ProteinID:
XP_011162607
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All DBs
Position
10:complement(17244128..17292638)
Genome browser
AA seq
949 aa
AA seq
DB search
MKKGRLSLNRKLWNETAGTCNDPVEISSDDDSIDVVPNILKSTRECTSVTNHEAARDLIN
IDSKHNVSVDSSDEDVTVVDDTPYTFNKSPSLFNWSTNNKHWSDMKTSFNDIDASHQNNF
PGSSVSPEEMPLSKKQKLMNEWRSHSSYSESTSTNDWSSKADSYESIDNLYPVNETKDDP
PLQVEIQHNIMIAGIPVKFPVKPYPCQIAVANSLIEGCKKEQNCLLESPTGSGKTLALLC
SSLAWQEYYSEKLCQEKNDKPIDVDGTSSCIDESLDSLSHNNLFLNNEFHDKTNFNKDMA
QKVPKIYYGTRTHKQIAQVVKELKRTAYKHKRMTILSSRDHTCIQQTNRNKNDLCNELLD
PHKNKTCPYYNEHSKKKASIFGSMPTPWDIEDLVSLGNSIGACPYFGARSLMTKADIIFC
PYNYILDPAIRESMQIRLRGDIVILDEAHNIEDICREAANVILRDDEINTAIMDCHHLSA
VYRDKYHDPNTAAVYDTIEKYFEDFVKFIQKIDVEQNKNDFKEMTSKCWPGSEFQVLLDI
HNVGCPKFSDFHNASDIAIDDFITNMKEERHNKIKPTITRDTKNILEHLCLAIEMITSDI
YANDYRIYVVETIEASKIKPVTKNSWLSKNTEKTKIRTLKVICMNPAVTFAPLARDTRSV
ILASGTLTPTTSFQSELGTKFPRIVNPNHIIPKDQIYIRCIPRAPNGQSFKVVYEEVNKW
TFQDNLGNLVIQVCDAVPYGVLCFFSSYHVMNTICNRWKENKMWDKLSTLKTIFMEPKDH
RENHQVMEEYRSVIEKSSTQSFRDSCGALLFAVFRGKMAEGIDFSDNEARCVLAIGIPYF
RQSNDITMKMNYNDANISKGLLSGREWYTVNAFRALNQAIGRCVRHINDWGAVLLIDERH
MQSKNNDYLPKWIKQNMKSNNTNLDIELQDFVAIQAARESERKSVKKEN
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagggaaggttgtctttgaataggaagctctggaatgagacagcagggacatgc
aatgacccagttgaaatatcctcagatgatgacagcattgatgtagtcccaaatatactg
aaaagcacgagggagtgcacgagcgtaacaaatcacgaagcagctagagacctgattaac
attgattcaaagcataatgtgtcagttgattcgagtgacgaagatgttactgtagttgac
gatactccttacacttttaataaaagcccatcgctgtttaattggagtacaaacaataaa
cattggagcgatatgaaaacgagttttaatgatattgatgcatcacatcaaaacaatttt
ccaggaagtagtgtctcgccagaagaaatgcctctatctaaaaaacagaaactaatgaat
gagtggagaagccactcaagctatagtgaatcgacaagcacaaatgattggagctctaaa
gcagatagctatgaatcaatagataatctatatccagttaatgagacaaaagacgatcca
ccgctgcaagttgagatacagcataatataatgattgcaggaattccagtcaaatttcct
gtaaaaccatatccctgccagattgcagtagcaaacagtctcattgaaggatgtaaaaag
gagcagaattgtcttcttgagagtccaactggcagtggcaagactttggctcttctgtgc
agctctttggcatggcaggagtactacagtgaaaaattatgtcaagagaaaaacgataag
ccgatcgacgttgatgggacaagttcatgcattgatgagtcattagactcattaagccat
aataatttgttccttaataacgaattccacgataaaacgaattttaacaaagacatggca
cagaaagtgccaaaaatatattacgggacacgaactcacaagcaaatcgcacaagtagtc
aaagaattgaagaggactgcgtacaagcacaaaagaatgacgatactgagcagccgggat
cacacgtgcattcagcaaaccaacagaaacaagaacgatttgtgcaacgagctactcgat
ccgcataagaacaaaacatgcccgtattacaatgagcacagtaagaaaaaagcgtcgata
tttggcagtatgccaactccttgggatatcgaagatttggtttcgttaggcaatagcatt
ggtgcctgtccatatttcggggcgagatctttgatgaccaaagcggacattatcttttgt
ccgtataactatattctggatccagcgattcgcgagagcatgcaaatccgtctgcgaggc
gatatcgtgattctcgatgaggctcacaatatcgaggatatatgccgggaagctgccaat
gtgattctcagagatgacgagatcaatactgctattatggattgtcatcatctttcagcc
gtatatcgtgataaatatcatgatcccaataccgcggccgtttatgatactatagaaaaa
tatttcgaggattttgtaaaattcattcaaaaaattgacgttgaacaaaataaaaatgat
tttaaagaaatgactagtaagtgttggcctggcagcgaatttcaggtattgctcgacata
cataacgtcggatgtcctaaattttccgattttcataacgccagtgacatagctatagat
gattttataacaaatatgaaggaagaaaggcataataaaataaagcccactattacgaga
gatactaaaaacattcttgagcatctctgtttggctatagaaatgattacatcggatatt
tatgctaatgattacaggatatatgttgtagaaacgattgaagcttcaaagattaagcct
gtaaccaaaaacagctggctatcaaaaaatactgagaagacaaagatacgaactctgaag
gtgatatgtatgaatcctgctgtaacttttgcgcctttggctcgtgatactcgctctgtg
atactcgcttcgggtactttaacgccgactacgtcgttccaaagcgaactcggcacgaaa
tttccacgtatagtcaatcctaatcatattataccgaaggatcaaatatatataagatgt
ataccacgggcgccaaatggacaatcttttaaggttgtatatgaggaggtgaacaaatgg
acttttcaggacaacctcggcaatttggttattcaagtatgtgacgcagtaccatatggt
gtattgtgttttttttcatcttaccacgtaatgaatactatatgcaatagatggaaggag
aacaagatgtgggacaaactctccacgttgaaaaccatttttatggagccgaaagatcat
agagagaaccaccaagtcatggaagaatatcgcagtgtaattgaaaaatcgtcgactcaa
tcgtttcgtgactcatgtggagctctcttgtttgcagttttcagaggaaagatggcagaa
ggaatcgatttcagcgacaatgaggctcgttgcgtactagcaattggcataccgtatttt
cgtcaaagcaacgatataaccatgaaaatgaactataatgacgcaaatatctctaaaggt
ttgctatctggtagagaatggtatactgtaaacgcatttagagcgctaaatcaagcaata
ggccgttgtgttaggcatataaacgattggggcgccgtactactaatagatgaaagacat
atgcagtcaaagaacaacgactacctaccaaaatggattaaacaaaatatgaaatctaat
aatacaaatctggatatagagcttcaagattttgtagctatacaagctgcacgtgaaagt
gaaagaaagtctgtcaagaaagagaattaa
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