Solenopsis invicta (red fire ant): 105197809
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Entry
105197809 CDS
T03916
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
soc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105197809
03015 mRNA surveillance pathway
105197809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105197809
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105197809
mRNA cycle factors
P-body specific factors
105197809
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
105197809
NCBI-ProteinID:
XP_011162662
LinkDB
All DBs
Position
10:16654801..16659405
Genome browser
AA seq
1157 aa
AA seq
DB search
MSENANEATPAEKETATEEPDVVSEEDRQFLTEYVRETEQRLATKEEIRAANLNPTRPPE
ASFSKLDSSLKRNTTFVKKLKNFSMTQLDTVLKDMATLNLTKYVSEVATALVDAKIKMTD
VAPAIRVCSFLHQTYAEFSTHFFENWQRILSFKIGDKIANPSKLRVDLRFYAELVNAGIF
THKQGLPLLGSVLTVLINMDKEEHNNASIILSFCRHCGEDYAGLVPKKVRELSEKLNVTI
PKSKLLTPDKQQNVKLLLRDYYNSLCKHMLKEHKELQAFEKQNRKILQTRGELSSERKEK
LEALQVSYERLLTSVQSFSDTLDEPMPELPVDNEIKTETEETLKMINEGEDNAMLEDMWG
DEETRRFYEVLPDLTVFLPGSYLKETPKDTPKTDTAITEDALDEEIVFDELEETEKIEEP
PEVEVEEPQISNTSNKILLDAFLTHLPNCVNREMIDNAAVNFLMNLNTKHNKKKLVKALF
GVSRIRQDLLPFYSRLAAILYPVMPEIGNDLCQMLKQDFKYHVRKKDQINIESKIKVVRY
IGELVKFKLYSKIEALYCLKVLLHDFTHHHIEMACNLLEICGRYLFCSPDSHQRTKVYLE
QMMRKKAVTALDSRYVTIIENAYYFVNPPESTGGVTKKDRPPVHEFIRKLLYQDLSKTNT
DKVLKWMRKLDWEDESVSSYAIKCLTAAYNVKYPNIRCVGSLLAGLVAHYETIGPQVVDG
VLEDIRLCMEINLPKFNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFGVSVDHSMP
SMLDPPDHLFRIRLVCTLLETCGQYFSGGSSKKKLDYFLVFFQNYFWFKYTDPVWTSENP
FPVGIDYMYRDTLTMLRPKMQLFQSYKEAQCAVEELRNTLYPTLGNPPVDDTTAEGENDM
GVILEADEETAMTGNGSGDAKGMAELHFEESEDCSEAQSEEEWTADAERDDAMGTQENTQ
GDRSQSLSADGGTEGVIVDVTEELNAALPAGPRRVSCPEDDDFLSALDKMVSDNIQDRMR
DSVKPQQVDISVPLHVKSTKKTYEQLQERPTDNSTVDFILMLRKGNKQQYKNLAVPVSSE
LAMNLRNREQEQKEEKERVKRLTLNITERQEEEDYQETMNQSTRPVTVNLNRERRQKYNH
PKGAPDADLIFGPKKIR
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaacgcaaacgaagcgacaccggctgagaaagagaccgccactgaagaacca
gacgtcgtctcggaggaggaccggcagttcttgactgagtacgtgcgagaaacggaacag
agactcgcgacgaaggaggagattcgcgcagccaatctgaatcccacaagacctccagaa
gcatcatttagtaaactcgactcgagcctcaagaggaacactacgtttgtcaagaaactg
aaaaacttcagcatgacccagcttgacacagttttgaaagacatggcgactttaaaccta
accaaatacgtaagcgaagttgcgactgctctagtagacgctaaaattaaaatgactgac
gttgcgcctgctattagagtgtgtagctttctccatcagacatacgctgaattttccact
catttctttgaaaattggcagaggatactgtcgtttaagattggcgataagattgcaaat
cccagtaagttgagagtagatttgagattttatgcagagttggtaaatgctggaatattt
acgcacaagcagggcttaccgttgcttggctcagtattgactgtattgatcaatatggac
aaggaggagcataataatgctagcataatattgagtttttgccgacattgcggcgaggat
tacgccggtcttgtacctaaaaaggtgcgagaactgtctgagaaattaaacgttacaatt
ccaaagagtaaactgttaacaccagacaagcagcagaacgttaagttgttactgcgtgac
tattacaattctctgtgcaagcatatgctaaaggagcacaaggagctgcaggctttcgag
aagcaaaatcgcaaaatactgcagactagaggagaactgagctcagaacgaaaggaaaag
ctggaagctctacaggtttcttatgagcgtctattaaccagcgtgcaaagcttctccgat
acactagacgaaccgatgcccgagcttccggtagacaacgaaataaagacggaaacagaa
gaaacactgaagatgatcaacgagggagaagataatgctatgctagaggatatgtggggt
gatgaagagacaagacgtttctacgaagtgttaccggatctgactgtcttcctaccgggc
tcgtatttgaaggaaactccgaaagataccccgaagacggacacagcaataacggaagac
gctctcgatgaggaaattgtattcgacgagttggaggagactgaaaaaatcgaggaacca
cccgaggtggaggtggaggaaccacaaatatccaacacgagcaacaagatactattggac
gcttttctgacacatctgccgaattgcgtgaatcgtgagatgattgacaacgccgcggtg
aattttctaatgaatcttaacacgaaacacaacaagaaaaaactggtaaaagctcttttt
ggcgtttctagaatccgtcaggatctgctacctttctactctcgcttagcagccattctt
tatccagtaatgcctgagattggcaatgatctgtgtcagatgctgaagcaggactttaag
tatcacgtgcgcaagaaggatcagatcaatatcgagtcgaagatcaaagtggtccgctac
attggcgagctcgtcaagtttaaactctactcaaaaatagaggcattgtactgcctgaag
gttttactgcacgactttacgcatcatcatattgaaatggcttgcaatttattggagatc
tgcggtcgatatctcttctgttcgccggattctcatcaaagaaccaaggtctatttggag
cagatgatgcgcaaaaaagcagttaccgcgctcgattcgcgctacgtgacgattatcgag
aacgcgtattacttcgtaaacccacccgaatcgactggtggcgtcacaaaaaaagacaga
ccacctgtacatgaatttattaggaaactactgtatcaggacctctccaagacgaatact
gacaaggtgctcaagtggatgcgtaaacttgattgggaggacgagagcgtatcgtcttac
gctataaaatgtctcactgccgcctacaatgttaagtatcccaatattcgatgcgttgga
agtctgttggccggcttggtagcccattacgagactatcggaccgcaggtggtcgatggt
gtgctcgaagacatacgactatgcatggaaatcaaccttcccaaattcaatcaacgacgc
attgccatggttaagtacttgggcgaattgtacaactaccgaatggtagagagtggcgac
attttccgcactctatatttgcttatcaccttcggtgtcagcgtggatcactccatgcct
agcatgcttgatccgcctgaccatctctttcgcattcgtctagtgtgcacattattggag
acttgcggccagtacttcagcggcggatccagcaagaaaaaactcgactattttcttgtt
ttcttccagaattacttctggttcaagtacacggacccagtctggacatccgaaaatccg
ttccccgttggaatagattacatgtatcgtgacacattgacgatgctacgacccaaaatg
caattgttccagagctacaaagaggcgcaatgtgctgtagaagagttgcgcaacactctc
tatccgaccttgggtaatcctcccgttgacgataccacggcggaaggcgagaacgacatg
ggcgttattctggaagctgatgaagagacagcgatgaccggaaatggtagcggggacgcc
aagggtatggccgagctacatttcgaagagtctgaagattgctcagaggcgcagtcggaa
gaggaatggacagccgatgcagaacgggacgatgctatgggtactcaagaaaatactcag
ggtgatcgatctcaaagtttgtcagcggacggtggcaccgaaggtgtgatcgtggatgtg
acggaggaacttaacgcagctttaccggctggaccacggcgcgtgagctgtccggaggac
gacgatttcctgtcggcgttggataaaatggtctcggacaacatacaggaccgtatgcga
gattcggtcaagccacaacaagtggacatctccgtgccactgcatgtgaaaagcacaaag
aagacatacgagcaactgcaggaaaggccaaccgacaatagcacagtagattttatactg
atgctgaggaagggcaacaaacaacagtacaaaaatcttgcggtccctgtatcatccgag
ttagctatgaatctcaggaatcgcgaacaggaacagaaagaggagaaagagcgtgtaaaa
agactgaccttaaacattactgaaaggcaagaggaggaggattatcaagaaactatgaat
cagagcacgagaccggtcacggtaaacctgaatagggaacggcggcaaaagtataatcat
cctaaaggagcacccgatgcagatctcatttttggaccgaaaaaaatccgataa
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