Solenopsis invicta (red fire ant): 105198247
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Entry
105198247 CDS
T03916
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
soc00535
]
105198247
04091 Lectins [BR:
soc04091
]
105198247
Proteoglycans [BR:
soc00535
]
Cell surface proteoglycans
Others
105198247
Lectins [BR:
soc04091
]
C-Type lectins
Others
105198247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
105198247
NCBI-ProteinID:
XP_011163203
LinkDB
All DBs
Position
7:complement(9491180..9545214)
Genome browser
AA seq
2351 aa
AA seq
DB search
MHRKRPTFLTDMGLLMFLAVTASLLGYCQTDEKVSFYGASYIHLPVQEAKNATDISFRFR
THLADTILLLAAGKTDYCLIKLEAGRLKVHINLGAGENEMASARGLTLNDLSWHEVNLTR
REANISLQIDVIHTTRSQLPGRFFELNIHYGIFIGGQGDFNELFLGHTDYLRGCMADIIY
NGAKVIEYARSRKGQSEATAVTWGCSPEFDATRSTEVSFVEDGAFVAIPRPIPRSGSRWE
FELKTGADSGLLLYNTGQSSYADYLGIELFEGKIRLLMNKGNGPTELTHGTLVADGKWHS
VIVDFNPSGLGIAVDHHEKTMALPSGGNRFLDLADTLYIGGTELNKRARALSKGLRSGDV
SYKGCIRNMVLDNKDLGLPDVKVSQGVVVGCVWGYPCIEADPCVSSASCMQLGVNSFRCN
CDQSLCIKPNYAEDYKIYSNTTLPVNLEILSLSPLLVSEGEHVLVTSENIAMVLDIAKYG
VEETGVTFTLVTPPTYGTLALDLLTSRNDHSFTLQDINQDKIQYMHDGSETTEDSMILEL
TLVAGTGYALPGYLQGHLRFPLHVNVTPVNDPPLLEIPTAKVLRLAQGTRKILTKELIWA
IDADTPSEMLIYTILRADTDAGHIERVTSPFRPIDTFTQAELMQGLIAYVHRGNAKPNAM
LGLQVSDGIESSQPAYLRVSAYPLQIKLTHNTGLIVVHRSFSYLTPANLSFATNSDDNTI
DIRYDVVSPPQFGVLQRLKDVSSSWTNVDHFTSRDVELHTIRYAHNVGSPNQDEFKFQAS
VREVKTQQTYDFQITFIDLELKETRRVPINLTNTSNITITNNHLRYQTNPLVTSPSKIVF
TLITGPRYGNLFLFDRKLTTTDTFTQEDIEADRLSYRLYRRSYSNILDEITFKVNAPQCV
DIHANLKVRYYLGKNSKSLEGVEYLKVDEGSKVPLRITHVNPKEYGISSLIYNLTISPNH
GWLSIANSSISQNQKNVSSFTLEDVLMQTVYYVHDDTETKEDSFEFVAVSMDSVDFMYVG
KFRIEIIMKNDNPPERTVNRIFHVVSRGEKLITNKDLAYMDKDIGTKASELIYTRRDVRK
SALYRITNLSVQIREFSQQDINDGMILFRHQGDEHEKIEFGITDGHFYRTGVLEIQASPP
YIRLRESNGSVVQFNKSVVLRSKELEIETNVYATEKDVKYNVWEKPKHGILMKHGRESNS
FTEDDLKHGSVLYKHLGGSLTKDTFRFKVFVKGADAEGALTIKIYPESYWESLIIQNNKT
ILVDEATSILLNRKSLDIMHPKISPTEIVYYVREWPQNGYLELQIHDEQIREGEEIREEY
SGNAVKHFEQSLINDNRVFYVQSVMNQTNDRFVVDVTNGITWLRGLSVNFVIVPEKLYVE
AKSYTVVEGKSVILSETNFLVVTPYYAGKISDYRVVEKPKHGTILDSTKNNQVKKFSQKH
LNAGVIVYKHNGNEFLSDSFKMVVTAGDKMSEPFDVSIIVQPVNDEVPVLVNRTDLNVWQ
GGSVILTPTNLAAVDNDTAPYDIIFNVTGVRNGYISLITSPDVDIYNFTQSQINESQVVF
THTNGSDGEFIFVLSDGVHTTKSYTIFITTKPIRLNIEHNMPLNVFPLTRKLISDKLLLT
TCSDEAREIRYTVRNGPHLGKVIMETSEGVWLEVERFTQRDINNSKVIYEHTKQFMDLTA
NDSFTFDVETHFAGTLTNQVFQIDISVSSGGLDRYITTKTVKVMEGASAEVVMNISGIVS
FLQINAGIPNPAVLSRLVHQPSHGHVMLLPDLNVTTFTQPQVEGGKIAYYHDHSDTLEDR
IQFSLYLTPGHVLLCDTSVPVVIEPINDQPFKLITNDPYMMVVQNQNQTITQENLLTTDP
DTPPEEITYDVISGPTFGRLLLLPFNQNTSEVRPVEKFTQYDVDSNRVVYEHNGTLQTAS
FYFRVGDGAYTPIYRVFNVHILAIRLNVTVTGPVSLQQGSNIAFISENDVKLDTNARQDL
VTYEITTHPKHGILYVRDSAAATFKQTDLLSKSVIFRQTDMTVSNDSLELSARLSGFEQK
HIRIEIKVVPLMIMKSMTALASEKNRITIQYLDATPLAKLTTSNPVYTIAKKPKYAKIKR
IIRSSSASGEKRGAREREVARFSHQEIISGVIYLVCRKIPSIDGVADSFSFILAASTFQP
AMGDFEFHIKLDIDDDNITLGGPMDPVGHEGEMAIAPNMSNDYLLILGMLLGVFLLGVVV
IITIRCRHNKYKHAEEEKAETTPAVGVMPLPRPPDHLMPATPHLKPFGNDHNSVTASTPL
PMLPSTLPQCKVIPLSPLESGSEIDVSARYPYGVADGDEWSSFDTSDLPCQSATTQRTKK
NPLLRRDQYWV
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggaaaaggccaacgttcctcaccgacatgggactgctaatgttcttagcggta
acagcctctctgttgggttactgccaaacggacgaaaaagtgtcgttttacggggcgagc
tacatccatcttccggttcaagaggccaagaatgctactgacattagtttccggttccga
actcatctcgccgatactatactgctattggctgctggcaagacggattactgcctgatc
aaacttgaagccggcagattgaaggttcacattaatttgggcgccggtgagaatgagatg
gcgagcgcccgtgggttgacactcaacgacctcagctggcacgaggtgaatttgacaaga
cgcgaggccaacatcagcttgcagatcgacgtgatacacacgacgaggtcccaactaccg
ggtcgctttttcgaactgaacatacactatggcatcttcatcggcggacagggggacttc
aacgagctatttctaggtcatacggattatctgcgaggatgtatggctgacataatttat
aacggcgccaaagttatagagtacgccaggtcgaggaagggccagtcggaggcaacagcc
gtaacgtggggctgctcgccggaattcgacgccacgaggagcacggaagtcagctttgtc
gaggacggcgccttcgtcgccattccgcgccccattccgcgctccggctcgagatgggaa
ttcgagctgaagaccggcgccgacagtggcctgttgctctataacacagggcaatcgtct
tacgcggattacctcggtatagagctgttcgagggtaagattcgactattgatgaataaa
gggaacggcccgaccgagttgacgcacggcactctggtggctgacggtaaatggcatagc
gtaatcgtggatttcaatccgagtggccttggcattgccgttgatcatcacgagaaaaca
atggctctgccgtccggcggaaatcggttcctcgacctggcggacacattgtacatcggc
ggcacggagctgaacaaacgcgcccgggccctgagcaagggtcttagatctggcgacgtg
agttacaagggctgcatacgaaacatggtcctcgacaacaaggacctcggtttaccggac
gtaaaggtcagccagggtgtcgtcgtgggctgcgtctggggatatccgtgtatcgaggcc
gatccctgcgtatccagtgcatcgtgtatgcaactgggtgtcaactcattcaggtgcaac
tgcgaccagtcactatgcatcaagccgaattacgccgaggactacaagatctactcgaat
accacccttcctgtaaatttggaaattctctctctgagccctctactagtctccgaggga
gagcacgtgttagtaacgagcgaaaatatcgcaatggtattggacatcgctaaatacggc
gtggaagaaactggtgtcacgtttaccttagtgacaccgccaacctacggaacgttggcg
ttagaccttctaacatcacgaaacgatcactccttcacgttgcaagacatcaatcaggat
aagatacagtacatgcatgacggtagcgaaaccacagaggacagcatgattctggaattg
acgttggtggccgggacaggctatgcgcttccaggatacctccaaggacatctcagattt
cctcttcacgttaatgtcactcctgtcaatgacccgccgttactcgagataccgaccgcg
aaagtgctgcgtctggcccaaggtacaagaaaaatactgaccaaggagttaatatgggct
atagacgccgacacgccgtcggaaatgctgatttatacgattttacgagcagatactgac
gcggggcatatcgaaagagttacttctccgtttcgacctatcgacacgttcacgcaagcc
gaattaatgcaaggtctcatcgcatacgtgcatcgtggaaatgccaaaccaaatgcaatg
ttgggtttgcaagtgagcgatggcatcgagagtagtcagcccgcgtatctacgcgtatcg
gcttacccgttgcaaatcaaactgacgcacaataccggcctcattgtggtacaccgttcg
ttctcttacctaacaccagcgaatctctcgtttgccacaaattcggacgacaacaccatt
gacattcgttacgatgtcgtctcgccaccacaatttggtgttttgcagagactaaaggac
gtttcgagtagttggacgaatgtagaccattttactagtcgagacgtggaattgcacacc
attcgttatgctcataacgtcggcagtcctaatcaggatgagtttaaattccaagcgagc
gtgcgcgaagtgaagacacagcagacctacgacttccagattactttcatcgatctcgag
ttgaaggagaccagaagagtacctattaatctcaccaatacgtcaaacatcactatcacg
aacaaccacttgaggtaccagacgaatccgctagttacatcaccaagtaagatcgtcttc
actcttataacgggaccaagatacggcaatttatttctgttcgatcgtaaacttacgacg
actgataccttcacgcaagaagatatcgaggccgatagactgagctatcgtctgtacaga
cgatcctattccaatatcctcgacgaaataacgtttaaagttaacgcgcctcaatgcgtc
gatatacacgccaatttgaaagttcgatattatcttggcaagaacagcaaatcgctggag
ggcgtggagtatttgaaagttgacgaaggctcgaaggtgcctctgagaatcacgcatgtg
aatccaaaggaatacggtatatcctctctgatatacaatcttacgataagcccgaatcat
ggttggctctccatcgcgaatagttcgatatcgcagaatcaaaaaaatgtctcatctttt
acattagaagatgtattgatgcagacggtatattatgtgcacgatgataccgagacaaaa
gaggattctttcgagtttgtggcagtgtccatggactccgtggattttatgtacgtcggg
aaatttcgaatcgagatcatcatgaaaaacgataatccgccagaacgaacagtcaacaga
atttttcacgtcgtatcgagaggggaaaaactgataacaaataaggatctcgcgtatatg
gataaggacattggcactaaagcgagcgagcttatttataccagaagggatgtcaggaaa
agtgcgctgtacaggataactaatctctcggtacaaatacgcgaattttcgcaacaagat
atcaacgatggtatgatactcttccggcatcaaggggatgaacacgagaaaattgaattc
ggcatcactgacggtcacttttataggactggtgttcttgaaattcaagctagtccacca
tacattagattacgcgagagcaacggctcggttgtccagtttaacaagtccgtggtgctt
cgatcaaaagaattggagatagaaacgaacgtgtatgctacagagaaggacgtgaaatac
aatgtatgggagaaaccgaagcacggtatactgatgaaacatggtagagagtcgaacagt
tttacggaggatgatctgaagcacggtagtgtactgtacaagcacctaggtggatcctta
acaaaagatacctttagatttaaagtgtttgttaaaggcgcggatgccgaaggtgcgtta
acgatcaaaatttatccagagagctattgggaatctttgattattcaaaataacaagacg
atactggtcgacgaagctactagcatcctgttgaatcggaagagcctcgacataatgcat
cctaagatatcgccaacagaaattgtctattacgtgcgagaatggccgcagaatggctac
ttggagttgcaaattcacgacgagcagataagggaaggcgaggagataagggaagaatac
agcggtaacgcggtgaagcatttcgagcagagtctgataaacgacaatcgcgtcttctat
gttcaatcggtgatgaatcaaacgaacgatcgtttcgtcgtggacgttaccaacggtatt
acgtggttacgtggtctaagtgtgaactttgtgatagtgccggagaaactttatgtcgag
gcgaagagttacaccgtggtggaagggaagagcgtgatattgagcgagacgaacttcttg
gttgtgacgccatattacgccggcaagatatcggattatagagtagtagaaaaaccgaag
catggcacgattctcgattccacgaagaacaatcaggtaaagaagttttcgcaaaagcat
ctaaacgccggagtcatagtgtacaagcacaacgggaacgaatttttgagcgattccttc
aagatggtagtcaccgctggtgataagatgagcgagccttttgacgtatcaattatcgtt
cagccggttaacgacgaggttcctgtgctagtgaatagaacggatctaaatgtttggcaa
ggcggatctgttattttgacgccgacaaacttagccgctgtagataacgatactgccccg
tacgatataatattcaacgttactggagtgagaaatggatacatctcgttaatcacttca
cccgacgtggacatttataattttacgcagagtcaaattaatgagtcacaagttgtattt
acgcatacgaatggatctgacggcgagttcattttcgttttaagcgatggtgtacacacg
acgaagtcttacacgatttttatcaccacaaagccaattcgtctgaacatcgaacacaat
atgcctcttaatgtcttcccccttactaggaaattaatatcagacaaactcttattaacg
acatgttccgacgaagcgagggagattagatacactgtgcgaaatgggccccatttaggc
aaagttataatggagacaagtgaaggagtatggctggaggtcgagcgatttactcagaga
gatataaacaatagcaaagtgatttatgagcacaccaagcagttcatggaccttacggcc
aacgactctttcacatttgatgtcgaaacacacttcgctggaactttaacaaatcaggtt
ttccaaatagatatatcagtttcaagcggtggcttagataggtacattactacgaaaacc
gtgaaagtcatggagggtgcctctgcggaggtcgtcatgaatataagtggcatcgtatcg
tttctacaaattaacgccggaatcccgaatccagcggtattatcaagattagttcatcaa
cccagtcacggacacgtaatgcttctaccggatttaaacgtgaccacttttacgcaaccg
caagtcgagggtggaaaaatcgcttattaccacgatcactcggacactctggaagaccgc
attcaattctcgctatacttgacacctggccacgtgttactttgtgacaccagtgttccc
gtcgtcatcgagccaatcaacgatcagcctttcaaactcatcaccaacgacccgtacatg
atggtcgtgcaaaatcaaaatcagacgatcacccaggagaaccttttgaccaccgatccc
gacactccaccggaagaaattacgtacgacgtgatttcaggaccgacattcggcagatta
ttgcttttgccgttcaatcaaaatacttcagaagtgcgcccagtggaaaagttcactcaa
tacgacgtggattctaatcgagtggtgtacgagcacaatggaacattgcaaaccgcttct
ttctacttcagggtcggggatggtgcctacactccgatctatagagtctttaatgtccat
attttagctatacgattgaatgtgacggtaaccggtccggtaagtttgcagcaaggctcg
aatatagcatttatctcggagaacgacgttaagcttgacacaaatgcgcgtcaagatcta
gtgacctacgagattacaacgcatccaaaacacggcatattatacgtgcgggatagtgcc
gcggcgacgttcaagcagaccgatctactgtcgaaaagcgtgatattcaggcagaccgac
atgacagtgtcgaacgatagcttggaactgtcggcgcgattgagtggtttcgagcaaaag
catatacgcatagaaatcaaggtcgtgcctctcatgatcatgaagtcgatgacggctttg
gcgagcgagaagaatcgaataactatacaatatctggatgcgactcctttagcgaaatta
acgaccagcaatcccgtttacaccatcgcgaaaaagccaaaatacgcgaaaatcaagaga
attatcagaagctcctcggcgtccggcgagaaaagaggtgcgcgcgagcgagaagtggcg
cgtttttcacatcaagaaattatttccggggtaatatatctggtatgcagaaaaattcca
tcgatagacggtgtcgcggacagcttcagctttatcctcgcggcgtcgactttccagccg
gccatgggcgacttcgaatttcacattaaactcgacatagacgacgacaatatcactttg
ggcggtccaatggatccggtcggtcacgagggcgagatggcaattgcgccgaacatgagc
aacgattatctgttaattctcggtatgttgctcggcgtgttccttctcggtgtggtcgtg
attatcacgatcaggtgtcggcacaacaagtataagcacgccgaggaagagaaagcggaa
accacgcccgctgtaggagtgatgccacttcccagacctccggatcatttgatgccggcc
actccacatctgaagcccttcggtaatgatcacaacagcgtgacggccagcacgcctcta
ccgatgctgccctcgacattacctcagtgtaaagtgatacccttgagccctctagaaagc
ggttcggagatcgacgtatctgcaagatatccttatggcgtggcggacggcgatgaatgg
agtagcttcgacacttccgatctaccttgccagtcggccacaactcaaaggaccaagaaa
aacccgttgctgaggagggatcaatactgggtctag
DBGET
integrated database retrieval system
