KEGG   Solenopsis invicta (red fire ant): 105198312
Entry
105198312         CDS       T03916                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
soc  Solenopsis invicta (red fire ant)
Pathway
soc03020  RNA polymerase
soc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:soc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105198312
  09124 Replication and repair
   03420 Nucleotide excision repair
    105198312
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:soc03021]
    105198312
   03019 Messenger RNA biogenesis [BR:soc03019]
    105198312
   03400 DNA repair and recombination proteins [BR:soc03400]
    105198312
Transcription machinery [BR:soc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     105198312
Messenger RNA biogenesis [BR:soc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105198312
DNA repair and recombination proteins [BR:soc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105198312
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 105198312
NCBI-ProteinID: XP_011163289
LinkDB
Position
12:18123447..18125378
AA seq 173 aa
MFYHISLEHEILLHPRYFGPQLLDTVKQKLYTEVEGTCTGKYGFVVAVTTIDNIGAGIIQ
PGQGFVVYPVKYKAIVFRPFKGEVLDAIVTQVNKVGMFAEIGPLSCFISHHSIPEDMQFC
PNVNPACYKSKEEDVVIQADDEIRLKIVGTRVDATGIFAIGTLMDDYLGLVCN
NT seq 522 nt   +upstreamnt  +downstreamnt
atgttttaccatatttcgttggagcatgagattctattacatcctcggtatttcggcccg
caattacttgacaccgtaaagcagaagctctacacagaggtggaaggcacttgcacagga
aaatatggctttgttgtcgcagtcacaacgattgacaatatcggagctggtattatacaa
cctggacagggttttgtagtatatcctgttaagtataaagcgatcgtatttaggccattc
aaaggtgaagtgctggacgcgatagtgactcaagtgaataaggttggaatgtttgctgaa
ataggtccactttcatgctttatatctcatcattcaattccagaagatatgcagttttgc
ccaaatgtgaatccagcttgttacaaatcgaaagaagaagatgtagttatccaagcggat
gacgaaattagactgaaaattgtgggaacaagagtcgacgctacaggaatttttgctatt
ggcacgttaatggacgattacttaggtcttgtatgcaattag

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