Solenopsis invicta (red fire ant): 105198415
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Entry
105198415 CDS
T03916
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
105198415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soc03400
]
105198415
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105198415
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
SOG2
Motif
Other DBs
NCBI-GeneID:
105198415
NCBI-ProteinID:
XP_011163417
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Position
8:complement(11320113..11332199)
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AA seq
891 aa
AA seq
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MNDSDSDSSDSSNDFAGITPKDELTANFFSIKPVTKPNLVNTFKDESSDDEDFATVSENN
DIELFSEVVKNLEASQKTVNDENPQQNFSKDDKTLAVKEVKTPKKKNISDEINAILLQGE
SGAHACHEDDEDTDDEEEKEDVKRPEDYAIPKEGVKITLPGTSMIFKKKTVNKKESDLAA
LLRKKLKTNQIIIEKAARLCWLTYGFHLNHLANDPEIMATTLSLISTKNYPKDSFSLEYL
TKFTKWFRNIFTIESSDDEVIINKETLLKKIVEKKIYNYRELVILYVAILRSIGLHCRLI
VSLNPPLVKTYNELLPKKNTTKKEDKVKEETKETKKEDKVKEETKETKTKKTSSKKGKNV
ISKKGIKNKSAIQNDETARRNANEEAKRKAAEILRSKYSYDKKNHDKLNNSISTLNNAST
SKNTEAASTSPKKVESGPSPRRLRSHKASTSTKQNTAEIISENQPKTRNSKRRSRSSSSS
SEEEEKVQSNKSKRKYSNKTVIKSEKKNEENNQVSTDDEETDDKLKKRRDVWAEVYVESK
ASWICVNVLDGNVDCVTEIYKKASKPVLYVIAYNSEGLVRDVTRRYCPQWISVTRKQRID
EKWWIETLSYWQERETAMSKQEDELLLQKELEQPLPKTVSECKGHPLYVLVRHLLKYEAL
YPPDCVPLGHLKTGEAIYSRYCVYTLRSRETWLKKARVVKPKQEPYKIVKALPKYDKLSG
MRLKDSALELFGEWQTMDYIPPEAKDGKVPRNEYGNVDLFKKCMLPKGTVHINLPGLNRI
ARKLNIDCATAVVGFNFGSRGALPAMEGYVVCAEYEDTLREAWETEQIEAVKRAAERKKK
KIYANWRKLIRGVLIREKLLKKYEFKEDSKTEQSNKRLKSQKGAIKKPKTQ
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattccgatagtgacagttccgacagcagcaacgatttcgccggtatcacaccg
aaggacgaactgacagcgaatttcttctcaataaagccagtaacgaagcctaacctagta
aacacatttaaagatgagagcagtgacgatgaagatttcgcgactgtgtctgagaacaat
gacatcgaactgttttccgaagtggtcaagaatctcgaagcctcacagaagactgtcaat
gatgagaatcctcagcaaaacttctccaaagatgataaaacgctggccgtcaaagaagtt
aagacaccgaaaaagaagaatatatccgacgaaataaacgctattttgcttcaaggggaa
agcggggcacatgcgtgccatgaggatgacgaagacacggacgacgaggaggagaaagag
gatgttaaacgtcctgaggactatgctatacctaaggaaggtgtaaaaataacattacca
ggcacaagtatgattttcaaaaaaaaaacggtcaacaagaaggagtcggatctggctgcg
cttttgcgaaagaaattgaaaactaatcagattattatagagaaagcagctagactttgt
tggttgacatatggatttcacttgaatcatcttgcgaacgatcctgagataatggcaact
actctgtctcttatctcaacaaaaaattatccaaaagatagctttagtttggaatatttg
acaaaatttacaaaatggtttagaaatatatttacaatagaatctagtgatgatgaagtc
attataaataaggaaacattattgaaaaaaattgtggagaaaaaaatttacaattacaga
gaattagtaatactgtatgtggcaatactgagaagtattggtttacattgtcgtttgata
gtatctcttaatccaccacttgtaaaaacttataatgaattactgcctaaaaaaaacaca
acgaaaaaagaagataaagttaaagaagaaacaaaagaaacgaagaaagaagataaagtt
aaagaagaaacaaaagaaacaaaaacgaagaaaacatcctctaagaaaggtaaaaatgtg
atttcaaagaaaggtatcaaaaataagagcgcaattcagaatgacgaaactgcgcgaaga
aacgctaatgaagaggcaaagagaaaggcagcagagattctccgttccaagtattcatat
gataagaaaaaccatgacaagttgaataacagtatatccacactaaataatgcctctaca
tccaaaaatacagaggcagcttctacaagtccaaaaaaagtagagtctgggccatcccca
aggcgcttaagatctcataaagcatctacttccaccaaacagaacactgccgaaattatt
tcagaaaatcaacctaaaacgagaaattctaagagacggtcacgaagtagtagttcgagt
tctgaagaagaagaaaaagtacaatctaataaatcgaaaagaaaatacagtaataaaaca
gttatcaagtctgaaaaaaagaatgaagaaaataaccaagtgtcgacagatgacgaagaa
actgatgacaaattgaaaaaacgacgagatgtatgggcagaagtatatgtggaatctaaa
gcaagttggatatgtgtaaatgttttagatggaaacgtagattgtgtgactgaaatatat
aaaaaggcaagtaaaccagtattatatgtgatagcttataattcagaaggattagtaagg
gacgtcacaagacgctactgtccacagtggatttctgtcacacgtaagcagcgtattgat
gagaaatggtggattgagactttaagttattggcaagaaagggagacggctatgtctaaa
caggaagatgaattactattacaaaaggaactggagcagccgttacctaaaaccgttagc
gaatgcaaagggcatccgttatatgttctcgtcaggcacctacttaaatacgaagcccta
tacccaccagattgtgtaccattaggacatttgaaaacgggcgaagctatttactcgcgg
tattgcgtatatacgctgcgctcgcgagagacttggttaaagaaagctcgggtagttaaa
ccaaagcaagaaccttacaaaatagttaaagctcttcccaagtatgacaagctttcaggt
atgagacttaaagactcggcattggaactattcggagaatggcaaacgatggattacatt
cccccagaggctaaagatggtaaggtacctcgaaatgaatatggaaatgtggatttgttt
aaaaaatgtatgcttcccaaaggcacagtgcatataaacctcccaggattaaatcgcatc
gcacggaaattgaacatagactgtgcgactgctgtagtgggtttcaattttggtagtagg
ggcgctttgccagctatggagggctatgttgtgtgcgccgaatatgaggacacattacga
gaagcttgggaaacagaacaaatcgaggcagttaaacgggccgccgagagaaagaagaaa
aaaatttatgccaattggagaaaacttattaggggtgtactgattagggaaaaacttttg
aaaaaatatgaatttaaggaggactcgaagacggagcagtcaaacaaacgtttaaaatca
caaaaaggcgccataaagaaacccaaaactcaataa
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