Solenopsis invicta (red fire ant): 105198528
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Entry
105198528 CDS
T03916
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
105198528
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
soc04040
]
105198528
Ion channels [BR:
soc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105198528
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Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_3
Ank
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
105198528
NCBI-ProteinID:
XP_039311349
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Position
12:8532273..8538930
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AA seq
875 aa
AA seq
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MTHLQIYFKVILLQYLGVAYPHLQKIEKRFFEVVADGSVTEVRLFLEKHPDFNINAINFQ
GVSALHIAVNERNTAMVEYLLSHPDIDPGDTHLHAIRDDQLRIAVLILNKLNELAPGLEY
AGVTHSPDFPDDTTPLAVAAQYGRFEIIDMLRFRHHILPKPHPPSCNCDEICNYSIRISY
IFFPFYRRPEREKGDIITMVKMRLFMYRAISNPVYICQIEEDPILKAFQLSAELRKEASF
DKEFYPDYKALSDVSVISFLVQIYWILTQFFVIKEVTQFAADLIGCARTAEEVECVLKQT
AGFGRTSSFVYPRLLLALDYEQKTFVAHPNVQQVASRHDESFRKLRNFIKKLNLMSFQLV
ESQWIGTWHEWKVRNMWLKCLTIIPQIGLLPIKALVILFTPNSERVKFYEIPVNKFLSSV
ANYLIFLTFVFFQSRSDKTEQLRGPPNTGALLIISEIKVNPLATMRHYSSSERSFKTQNH
YSGSLRHFDVFFVIYVCIYKMKNKMLKGYEWVLAIYVISYIFAFVRLCIMDGPARCFKTR
TNWYELIMLILFVLTFLFWIAAAVDVRINGQRELERKYWHKYDPTLIAEGIFCIAAIMAF
FKLLFICQLDYDLGPLQLSLVKMIRDVGHFVAIFGIIVLAFAVGLCHLYQYYNGMVQTDD
ESKLKIEQESSFVDFRSTLKTLFWAVFCMSPVESADVIIENLPGERESETIINHHNFTEF
IGYFAFAGFQFMSVVIVLNMLIACMANTFTKVTDNVNVEWIFGRTEAYVDVMLTTTLPPP
FCIFSIFTGLRPVIKYIKILIKPPPGKRARWDFVNCCYIEDLEEKKDIRFAEVMSQLVQR
YLRQREKRVEETDVQKLRKELIEFSNILKEALSPS
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgacacatctccagatttattttaaggttattttattgcagtatctcggtgtggcatat
ccacatttgcaaaaaatcgagaagagattcttcgaagtagtcgctgacggaagtgtcacc
gaagtgcgactatttttggagaaacatccggatttcaatataaatgccatcaattttcaa
ggtgttagcgcgctgcatatcgctgttaacgagagaaatacggcgatggtcgagtatctg
ttgtctcatccagatatcgatccgggcgacacgcatctgcatgcaattcgagatgatcaa
ctgaggatcgccgtgctgatattgaataagctgaatgaattggcgccgggcctcgaatac
gccggtgtcactcacagtcctgatttcccggacgatacaacaccgcttgcggtggcggca
caatacgggcgtttcgagataattgatatgctcagattccgacatcacattctgccgaaa
ccacatcctcctagttgcaactgcgacgaaatttgcaattattccattcgtatatcatat
attttttttcccttttatcgcagaccggaaagggaaaagggtgatatcataaccatggta
aaaatgagattgttcatgtacagggcgatatcgaatccagtgtacatttgtcaaatcgaa
gaagatccgatcttaaaagcttttcaattgtcggccgagcttagaaaagaagcttcgttc
gacaaagaattttatcccgattacaaggcattgtccgatgttagtgtaatctcattcctt
gtccaaatttattggatattaacacaattttttgtgataaaggaggtgacccaattcgcc
gcagacttgatcggatgcgcacgtaccgcggaagaagtcgaatgtgtattaaagcaaact
gctggttttggtcgtacctctagtttcgtatatcctcgactattactagctttggattac
gagcagaaaacctttgtcgctcatccgaatgtacaacaggtagcgtcgcgccacgacgaa
agtttccgcaaattaagaaatttcattaaaaagttaaatttgatgtcctttcagcttgtc
gagagccagtggattggcacgtggcacgaatggaaagtcagaaacatgtggctgaagtgc
ctgacgataattccgcagatcggcctgctaccaatcaaggcgcttgtcatattattcaca
ccgaactcggaacgagtcaagttctatgaaatcccggttaacaaatttctctcttccgtg
gcgaattacttgatatttctcacattcgtgtttttccaatcgcgtagcgacaaaaccgaa
cagctacgcggaccacccaatactggtgccctcctaattatctccgagattaaagttaac
cctttagctactatgcgccactatagttcctcggaacgatcgtttaaaacacagaaccat
tatagtggctctcttcgacatttcgatgtttttttcgttatatatgtgtgtatatataaa
atgaaaaataaaatgctaaagggatacgaatgggttctcgctatttacgtgatatcgtat
atatttgcatttgttcgactttgcattatggacggtccggccagatgctttaaaacgcgt
acaaactggtatgagcttattatgctcatattgttcgtgctaacgtttctcttctggata
gctgccgcagtggacgttaggataaatggtcaacgagaattggagagaaaatactggcac
aaatacgatccgactttgatagcggaaggaatattttgtatcgcggcaatcatggccttt
ttcaaattactattcatctgccagctagactacgatctaggacctctgcaactttcttta
gttaaaatgatcagagacgttggtcattttgtcgcaatattcggtatcattgtcctggca
ttcgcagttggattgtgccatctttatcagtattataatggaatggtgcagacggatgac
gaatcaaagctgaagatagagcaagagagttccttcgtcgatttcaggtctactctaaag
actctcttctgggctgttttttgcatgagccccgtagaaagcgctgacgtgattatcgaa
aaccttccaggtgaaagggagtcagaaacaataattaatcatcataacttcaccgaattt
atcggttattttgcttttgccggtttccaatttatgtccgtggtaatcgtcttgaatatg
ctaattgcttgtatggcaaatacattcaccaaagtgactgacaatgtcaatgttgagtgg
atctttggtcgaactgaggcttatgtcgatgtcatgcttacaacaacgcttccacctcca
ttctgcattttctccattttcacgggattgcgaccagtaatcaaatacataaaaatactg
attaaaccaccaccaggcaaacgggcacgatgggattttgtaaattgttgctacatagag
gatctagaggaaaaaaaggacatacgattcgcagaagtcatgtcgcaactagtgcaacgt
tatcttcgtcaacgtgaaaagagagtggaggaaactgacgtgcaaaaactgagaaaggaa
ctgatagagttcagcaatattctgaaggaggctcttagtccgtcttaa
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