Solenopsis invicta (red fire ant): 105198541
Help
Entry
105198541 CDS
T03916
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5 isoform X2
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03018
RNA degradation
soc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105198541
09123 Folding, sorting and degradation
03018 RNA degradation
105198541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105198541
03041 Spliceosome [BR:
soc03041
]
105198541
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105198541
mRNA degradation factors
5'-3' decay
Lsm complex
105198541
Spliceosome [BR:
soc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105198541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
BPL_C
Hfq
LSM14
Motif
Other DBs
NCBI-GeneID:
105198541
NCBI-ProteinID:
XP_011163578
LinkDB
All DBs
Position
16:complement(9103153..9105753)
Genome browser
AA seq
91 aa
AA seq
DB search
MATSVSTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLQGFDDFVNMLLEDVTESEAT
PEGRRVTKLDQILLNGSNITMLVPGGEMPET
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctacttcggtgagcacaaatccgtctacgttattacctttagaacttgtcgacaag
tgtattggttctcggatacatattattatgaaaaatgacaaggaaattgtgggaactctg
caaggtttcgacgattttgtcaacatgctgctggaagatgtaacagaaagtgaggccacc
ccggaaggtcgtagagttacaaaattggatcagattcttctcaatggcagtaacattact
atgttggtgcctggtggcgagatgccagaaacgtaa
DBGET
integrated database retrieval system
