Solenopsis invicta (red fire ant): 105198617
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Entry
105198617 CDS
T03916
Name
(RefSeq) Bloom syndrome protein homolog isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03440
Homologous recombination
soc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105198617
03460 Fanconi anemia pathway
105198617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soc03032
]
105198617
03400 DNA repair and recombination proteins [BR:
soc03400
]
105198617
Enzymes [BR:
soc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105198617
DNA replication proteins [BR:
soc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
105198617
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
105198617
Bloom's syndrome complex (BTR)
105198617
FA (Fanconi anemia) pathway
105198617
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
Motif
Other DBs
NCBI-GeneID:
105198617
NCBI-ProteinID:
XP_011163689
LinkDB
All DBs
Position
2:complement(450848..457382)
Genome browser
AA seq
1383 aa
AA seq
DB search
MSKKIAVGQKSNQSTIVGFLAKTTNKNNVLQTSKSKSLTDKEADLNNELTNNLCFAKQRR
IAGDLVTIDTIINLDNSDSSDSCKSPLKTRINTVCSTMEMYRVENPPEEKQEIKKEFGFS
KLSRKKTCVISESSDSEEDKSNVKKCLRLNQCPIKRVIEDETKQASQIYQYAKCNNEYFP
SSSATLLKENKQKIKIESSDDDNIKPNNTKNKHLCTPKKDNIMANEKKNAIISESDVDSP
SSKYNGERSPRKHWAGVGPDIKLNLKDLGLNKQLGSWVEFIQQKSVMSTVPVTKDKLLER
RQDLKELEIEILDKFYTALELIPLPILEQFPKFDRCSFKKLQGLHRHVKAKLRLIQTSLS
KLSKEDEKEDLFESSETLGSSTSKSGATSISCMSESLNDNDCGYDYDNFIATDSSILKAT
TDFRQDLANVMESYATNVKKHDNNMEPVSAVKNETTVPNKKSTFQLKRPVKTILDAQVSK
TIAEMWEKDQQMSKTMNSSMDSDCVPVHDTSNDSIKTSPSNKKDMFSLRRNVILDSPDSP
HKIIANKSQGINQGFATKVETLTQQLEQFPALGENCNIDINDDDFTDWPQNDMAQSKEHA
DDKSNSKCEKNSVVYGKFTGNYKNDGVSGEFDGTTYPHSREMLQIFRQRFGLYTFRPNQL
QAINATLLGFDCFILMPTGGGKSLCYQLPALLSIGLTVVVSPLKSLISDQVQKLISLDIP
AAHLSGSITENQAEAIYRELSKKEPALKILYVTPEKISASPKLCSTLTNLYERELLARFV
IDEVHCVSQWGHDFRPDYKRLRCLRDNYPKVPTMALTATATPRVRTDILHQLGMTNPKWF
MSSFNRPNLRYSIIAKKGKNCSDEIVAMIMTKFKNACGIVYCLSRKDCDDYAAQMKKNGI
KALSYHAGLSDVQRSNCQGKWISDEIRVICATIAFGMGIDKPNVRFVIHAALPKSIEGYY
QESGRAGRDGETADCILFYNYSDMHRIRKMLELDNPSPQVINTHMDNLFKMVAFCENSTD
CRRSLQLNYFGEIFDRQQCIMNKITACDNCRCKDEITMLDVTEDAKKIMEAVRDISNRKK
LTVVFLTDIFKGSDLKKIRESGLTKHPLYGRGKSWNKSDIERLLHHMILQEYLREYMYIN
NEIACAYVTIGPKASELMTKKDVKVQIPTRQSNKSTSGVATVSTVTKKVDGIIKELQDRC
YTELMTIIRGIAGALDVSASSIMNMVAVRVMSQRLPETEEAMLQIPHVTKANFVKYGKPL
LNITQKYAAEKTGLLNENDEAQDSDDNDNTWDDNNSSCSYSSNNTASRGRKRKIGSRSNS
TSNKKYKRGGSSAWKGKGRQGTSKGSSRSTKGSTATVKKEVGLASFSQTKQYLTNPNRYM
NIA
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaagatagcggttggtcaaaaaagcaatcaatctacaatagtaggatttttg
gcaaagacaactaataaaaacaatgttctgcaaactagtaaatcaaaatcattgacagat
aaggaagctgatttaaataatgaattaaccaataatttatgttttgctaaacaaaggaga
atagctggagacttggtaacaatagacacaataataaatcttgataattcagatagttca
gactcttgcaaaagtccacttaaaacacgaataaatacagtttgtagtacaatggaaatg
tatcgtgttgaaaacccaccagaggaaaaacaggaaattaaaaaagagtttggattttca
aagttatcacgaaaaaaaacttgtgttatttctgagtcttctgacagtgaggaagacaaa
agtaatgttaaaaaatgtttgcgtttaaatcagtgtccaattaaaagggtaatagaagat
gagacaaagcaagcatcacaaatttatcaatatgctaaatgcaacaatgaatattttcct
tctagtagtgcaacattattaaaggaaaataaacaaaagataaaaatagaatccagtgat
gacgataacataaagcctaacaatacaaaaaataaacatttatgcactcctaaaaaggat
aatataatggctaatgaaaagaaaaatgctataatttcagagtctgacgttgatagccct
agctcaaagtataatggcgagagatcaccgagaaaacactgggcaggggttggccctgat
attaaattgaatctgaaagatttaggtttaaacaaacaattaggttcatgggttgaattc
attcaacaaaaatcagtaatgtctacagtacctgttacaaaagataagttgcttgaaaga
cgccaagatttaaaggaacttgaaattgaaattctggacaaattttatactgctcttgag
ttaattccattaccaatattggaacaatttccaaaatttgatcgatgctcttttaaaaag
ttgcaaggtctgcatcggcatgtaaaagctaaattacgtttaatacaaacaagcttatca
aagttatcaaaagaagatgaaaaggaggatttattcgagtcctcagaaacacttggatct
tcaacgtcaaagtcaggtgcaacgtcaatttcatgcatgtccgagagcttaaatgataat
gactgtggctatgactatgacaatttcatagccacagattcttcaatattaaaagcgaca
acagactttcgtcaagatttggcaaatgtaatggaatcgtatgcaacaaatgtaaagaaa
catgataataacatggaacctgtgtcagcagttaagaatgaaaccacagttccaaataag
aagagtactttccaattgaaaagaccagtcaaaacaatattagatgctcaagtttcgaaa
acaatagcagaaatgtgggaaaaggaccaacaaatgtctaaaacaatgaattcttccatg
gattctgattgtgttcccgtgcatgatacatctaatgacagtattaaaacgtcaccaagt
aataaaaaagatatgtttagtttaagaagaaatgtcatcttagatagtccagatagtcca
cataagattattgcaaataaatctcaaggaatcaatcaaggatttgctacaaaagttgaa
accttaacacaacaattagaacaatttccagctttgggagaaaattgtaatatagatata
aacgatgacgattttacagattggccacagaatgatatggcacagagcaaggagcatgct
gatgacaaatcaaactcaaaatgtgaaaaaaatagtgtggtatatggcaaatttactggt
aattataaaaatgatggtgttagtggagaatttgatggtacaacatatccacattcgcga
gaaatgttacagatatttcgacagagatttggattatatactttcaggccaaatcagttg
caagctattaatgcaacacttttgggatttgattgtttcattttaatgccaactggaggt
ggaaagtccctttgttatcaattgcctgccctcttaagtataggattaacagttgtcgtt
tcaccattaaaaagtcttatttcagaccaagttcaaaaacttatctcacttgacattcct
gcggcacatttatctggttctatcacagagaatcaagcagaggcaatatatagggaactc
tctaaaaaagaacctgctctcaaaatattatatgtaacaccagagaaaatctccgcctca
ccaaaattatgtagtactctgactaatctgtacgagagagaattattggcaagatttgtt
attgacgaggtacactgtgttagtcaatggggtcacgattttagaccagattataaaaga
ttaagatgtctcagggacaattaccctaaagtgccaacaatggccctgactgcaacggct
acgccacgtgttaggacggatattttgcatcaattgggtatgactaatccaaaatggttc
atgtccagtttcaacagacctaatttgagatatagtataatagcgaagaagggaaaaaat
tgttccgatgaaattgtcgctatgataatgacaaaatttaaaaatgcttgcggcatcgta
tattgcttgtcgcgtaaggattgcgatgattacgctgcacaaatgaaaaaaaatggtatt
aaagcattaagttatcatgcaggactttcagatgttcaaagaagcaattgtcaaggaaaa
tggatttccgatgaaatacgtgttatatgcgcgactatagcctttggaatggggattgat
aaaccaaatgtgcgctttgttatacatgcagccttgccaaagtccattgaaggctactat
caagaaagtggtcgtgctggtcgcgatggtgaaacagcagactgcattctattttataat
tactcagatatgcatcgaatcagaaaaatgcttgaattggataacccaagcccacaagtc
ataaatacacacatggacaatttgtttaaaatggtagcattttgtgaaaatagtacagat
tgtcgtagatcgctacagcttaattattttggagagatatttgataggcaacaatgtatc
atgaataagataactgcgtgtgataattgcagatgtaaggacgagattacaatgttggac
gttactgaagatgcaaaaaagattatggaagctgtacgagatattagtaatagaaagaaa
cttacagtagtattcttaacagatatttttaagggcagcgatctgaaaaaaattagagaa
tcaggtttaacaaaacatcctttatatggtcgtggcaaatcgtggaacaaaagtgacata
gaacgccttttgcaccacatgatactgcaagaatatttacgagaatatatgtatattaat
aatgaaattgcttgcgcatatgtgacaattggaccaaaagcgagcgaactcatgacaaaa
aaagatgtaaaggtacaaattccaacgagacaatctaataaatctacaagtggtgtggct
acagtttcaacagttacaaagaaagtcgatggtattataaaggaattgcaagatcgttgc
tataccgagctgatgacgataataagaggaatcgctggtgcattggatgtttccgcttct
tccattatgaatatggtagctgttagagttatgagccagcgtttaccagaaaccgaagaa
gccatgttacaaataccacacgttactaaggctaactttgtcaaatatggcaaacctctt
ttaaacattacacaaaaatatgcggcagaaaaaactggattgttaaatgaaaatgatgaa
gcacaggatagtgatgataatgacaacacctgggatgacaataattccagctgctcttac
agtagtaataatactgccagtcgtggcaggaaacgaaagattggcagtagatctaacagt
acgagtaataaaaaatataaaaggggtggctcgagtgcatggaaaggaaaaggtcgtcaa
ggtacatcaaaaggctcgtcaagaagtacaaaaggttcaacagcaactgtgaaaaaagaa
gtaggacttgcaagtttcagtcaaacaaaacaatatcttacaaaccccaacagatacatg
aacattgcttga
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