KEGG   Solenopsis invicta (red fire ant): 105198646
Entry
105198646         CDS       T03916                                 
Name
(RefSeq) gem-associated protein 5 isoform X3
  KO
K13133  gem associated protein 5
Organism
soc  Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:soc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soc03019]
    105198646
   03041 Spliceosome [BR:soc03041]
    105198646
Messenger RNA biogenesis [BR:soc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     105198646
   mRNA cycle factors
    P-body specific factors
     105198646
Spliceosome [BR:soc03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    105198646
SSDB
Motif
Pfam: TPR_GEMI5 Beta-prop_RIG_2nd WD40_CDC20-Fz Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40 Beta-prop_WDR5 Beta-prop_CAF1B_HIR1 WD40_Prp19 Beta-prop_WDR36-Utp21_1st EIF3I WD40_WDHD1_1st Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_RIG_1st NBCH_WD40 WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_EIPR1 TPR_19 TAF1C_beta-prop ANAPC3
Other DBs
NCBI-GeneID: 105198646
NCBI-ProteinID: XP_011163733
LinkDB
Position
1:complement(32305839..32313157)
AA seq 1233 aa
MNEVTLPPSPNWYLSNIFACSRRGTVAWGARNFIVIARPKENNVMQYSIVKDYFKDKVTT
LAFCPKLDSPDSPDLLICGGDDTKVRVLNVDTLELMAEFSFANESKLTAGVDWSVKDNNL
ACAVNSEGFLMYCNIRDKTSKIVFLGKLIATCLACCPHDSSLAAIGTKTGLVYIIRYHSI
VQKETILYKMRGHNEEIVSLSWCPSEMNVLQEGTEKDLLLASGGKDRSVFIWRAGRDGRY
ETVLNLPYMPILSSSHKSKLNSTNGTWIAVCWIEPNILLTSSLWGELLSWDFSTNKIKPE
CKLFHSFHSRGLFSIAAVPNYNTASDDSKTDSELMIWSLAQDRWIIGCKRNSDLTKPATI
EHKIPTQAGFIYCISPCPIDTSRIAFGVGDMMLRVWNLSEPHTTTFDVVMQWQMIKGKIR
AISWFPEDESTIAFGTGEGRVGVFDAIGTNKSPILFRQYHRNTIYKLEWAQLDSEYYLFS
CAEGELIAYKKTTPNEEPMPIIKKGCLEFSWKSNLCLAIALENGSIMFYDQKLKKRGTSI
HILRTKVNCLVWHPDSTMTDTWKSPFASYLAVASDSYSIMIFDMSKLLKELEVTGIEDVI
ENGNGEHATMHKLVATLNGHSEKVVCLAWSPHISGHLVSGSYDNIAQVWNVEKEELMGTY
MGHEGPVLSCLWSPLNSQLIMTGSSDFTLHVWNYTLSAQSPKQLSDIKADKKKNKQKKSP
KNKTNVLNDCENNMTTPNSVSQSTEVTISKQSKKKEKKSYFPKYNTLINDKSQILNFIKN
DIRRNQTEENDDIPHLFSKKENDLCTMIFQETHENLDTTTEINVWCNELKEHLLDAATHN
NLNDFLVSLAPSVSMSMWKDMCEAYARQLIEEDKPERAVSYLLSIHKIYEALEVFLNAKM
FKEAYALGRLKLDSDDKFLDKILQLWAEWAALKGQFEQAAQCYVKLGQFEEAAAILSRRK
DLYCLEIASELAFLSGNESYGISLAVDAMTRALAKSDWSKARSLIADIRQVQYLNVHIDT
HEAIMSTYLEQTELDVMKMWLEGRESSSVLQTLKEKYGTSYYDALRKKDDTNFVGMKDIS
NEKMMEINMSYQIALAAMCDEKETQLKHLTTALSSVFEFEKKAVQHGTSKGFFTYVLTKL
DTKKPTDECSIFEKNDYPLSQSIRAYLCIGLLNWLSKYSEQLSVEEETQFMQLVLNLLHD
NVNETNLVHQENIKYEELKNSKIYQDFLHKYYE
NT seq 3702 nt   +upstreamnt  +downstreamnt
atgaacgaagtcacgttgcctccttcaccaaattggtatttgagcaatatctttgcatgc
tcgagacgtggaactgtagcatggggtgcaaggaactttatcgtcattgcccggccaaaa
gagaataatgtcatgcagtattctatagtcaaagactactttaaggataaagtaaccaca
ttggcattttgtcctaaactggacagcccggatagtccagatttattgatttgtggtggt
gacgatacaaaagtcagggttttgaatgtagatacattagagttgatggcagaattctct
tttgctaatgaaagcaaattgaccgcaggggttgattggtcagtcaaagataataatctt
gcatgcgccgtgaattcagaaggttttctaatgtactgtaacatacgggataagacttca
aaaatagtatttttgggaaaactaattgctacatgtttagcttgctgtcctcatgactct
agtcttgcagcgatagggacaaaaactggtctagtttatattatccgatatcattctatt
gtccaaaaagaaacgatattatataaaatgagaggacataacgaagaaatagtcagtcta
tcatggtgtccttcggagatgaatgtgttacaggaaggaactgagaaagatttactttta
gcttctggtgggaaggatagatctgtatttatttggagagccggtagagatggcagatat
gagactgtactaaacttgccatatatgccaatcttatcttcctcacataaaagcaagctc
aatagtacaaatggaacgtggattgcggtatgttggatagagcctaatatacttctgact
agctccctttggggtgaactactttcttgggatttttcaacaaacaaaatcaaacctgaa
tgtaagttgttccattcgttccatagtagaggattgttttccatagctgctgtacccaac
tacaatacagcatctgacgactcaaagacagattccgagctcatgatttggtctttggcg
caagatcgctggattataggttgtaaacgtaatagcgatcttacaaaaccagcgaccata
gagcataagattcctacgcaagcaggattcatatactgcattagcccgtgtcccattgat
acctcgcgcattgcatttggcgtaggagatatgatgctgcgtgtgtggaatttatcagaa
cctcacacaacaacttttgatgtagttatgcaatggcaaatgataaaaggcaaaataaga
gcgatatcatggttcccagaggatgaatctaccattgcttttggtactggagagggtcgt
gttggtgtatttgatgcaattggaactaacaaatcacctatattgttcagacaatatcac
agaaataccatttacaagcttgaatgggcccaacttgactcggaatattatttgttctct
tgtgcagaaggagaattaatagcttacaaaaaaactacaccaaacgaagaacctatgcct
ataataaaaaaaggatgtttggaattttcttggaaatccaatttgtgcttagcaattgcg
ttagaaaatgggtcaattatgttttatgatcagaaactgaaaaaacgcggtacctcgata
cacattttaaggactaaggtgaattgcctagtgtggcatcctgatagtacgatgacagat
acatggaagtcgccgtttgccagctacttggcagttgcctctgattcgtatagcataatg
atttttgatatgtcaaagctgttaaaagaattagaagtaacaggtattgaggacgttata
gaaaacggcaatggtgaacatgccacaatgcacaagttagtagcgacattaaacggacat
tctgaaaaagtggtgtgcctagcttggagtccgcatatcagtgggcacttagtgtctggt
agctacgacaacattgcacaggtatggaacgttgaaaaagaggaattgatgggcacgtac
atgggtcacgaaggaccggtgttatcctgtttgtggagtcctcttaattcacagttgata
atgaccggttcatcggatttcacgctacatgtatggaattatactttatcagcgcaatcg
ccaaaacaactttctgacattaaggctgataagaaaaaaaataaacagaaaaagagcccg
aaaaataagacgaatgtgctgaatgattgtgaaaataatatgactacgccaaattctgtt
agtcaatctaccgaagtaactatttcaaaacaatcgaagaaaaaagaaaaaaagtcatat
ttccctaagtataacacattaataaacgataagtctcaaatcttgaatttcatcaagaat
gatataagaaggaaccaaactgaagaaaatgacgatatcccccacttattttccaaaaag
gaaaatgatttgtgtacaatgatttttcaagaaacacacgaaaatttagatacaactacc
gagataaatgtgtggtgtaatgagttgaaagaacacctactcgatgcagccacacataat
aatttaaatgactttttagtatcgcttgcacctagcgtctctatgagcatgtggaaagat
atgtgcgaggcatatgcgcggcaattaatagaggaagataagccagaaagagcggtgtca
tacttactaagtatacacaaaatttacgaagctttagaagtatttttaaatgctaaaatg
ttcaaggaagcttatgcactcggaagattgaaattggattctgatgacaagtttctagat
aaaatattacaactttgggcggaatgggctgcccttaaaggtcaatttgaacaagcagct
caatgctatgtaaagttgggacagtttgaagaggcagcagcgattctttcacgccgaaaa
gacttatactgtttagagatagcgtcagaattggcgtttttaagcggtaacgagagttac
ggtatatctttagctgtggacgcgatgacgcgtgctctagcgaagtcagactggtcgaaa
gcacgttcccttattgcggacattcgacaagttcagtatctgaatgtacacatagatact
cacgaggcaattatgagcacatatttagagcagactgaattagacgtgatgaaaatgtgg
ctggaaggaagggaaagtagcagtgtgttacaaactcttaaagaaaaatatggtacctct
tattatgatgctttacgcaaaaaagatgataccaactttgttggtatgaaagatatatcg
aatgaaaaaatgatggaaataaatatgagttatcaaattgctttggcggccatgtgtgat
gaaaaagagacccaattgaaacatttaacaacagcattaagtagtgtgttcgaattcgaa
aaaaaagctgtacaacacggaacgagtaaaggattcttcacgtatgttctcacgaaactg
gatactaagaaaccaacggatgaatgtagtattttcgaaaagaacgattatcctctgtca
caaagtatacgcgcttatttatgtatcggactcttgaattggttatcaaaatattcggaa
cagttatcggttgaagaagaaacgcagtttatgcagttggtattaaacttgttacatgat
aatgtaaacgaaacaaatctagttcatcaggagaacataaaatatgaagaattaaaaaac
agtaaaatatatcaagattttttacataaatattatgaatga

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