Solenopsis invicta (red fire ant): 105198647
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Entry
105198647 CDS
T03916
Name
(RefSeq) nucleoporin Nup37 isoform X1
KO
K14302
nuclear pore complex protein Nup37
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105198647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105198647
03036 Chromosome and associated proteins [BR:
soc03036
]
105198647
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105198647
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105198647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_RFWD3
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
105198647
NCBI-ProteinID:
XP_011163735
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Position
1:32303892..32305687
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AA seq
417 aa
AA seq
DB search
MRPATIVCNARHSRQSRLRSALFRRCGGMRSALVGVVGRSHMRSRAALSAAPCTVPPTPL
TGGRPNLTRPGVCYAGSVLTRSHTYVRRRRDEAERMDEAVTTPPTFKRSFLDRIYCVEFS
PYEWSQHLICIALTKEIVVGTVRFQDEDDAVEDIAYNPIRTFHHDARPHAIAWSPETSLS
IVPKILTFCVAGSDFKIRLYNSNLNDINMYEILEGHKDYTNAISYEPEGELLASVSDDHT
CKLWAVKENQKCVSTFFLTSPGISVCWHSEESGKLLVAEKNGLIRMYNVRSQQAIMSLDS
GAVPLTAADWGPNPLKVVSMAAGELLLWDVSRPSRPLDERTLHVEGGLTVKISHANENLV
SSIGWPDNLLKVFNLRSKVVVLCGKVKLIGGMTWHYKLPYVCAGSDRDLCFWRININ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccagcgacgatcgtgtgcaacgctcgccacagcaggcagagcagactccgctcc
gcacttttccgaagatgcggcggcatgcgctcagcgctggtcggagtggtcggacgatcg
catatgcggtcacgtgctgccctctcggcggcaccgtgcaccgtgccgccgacgccgctg
acgggcggccgacctaacctaactcgaccgggcgtgtgttatgccggctccgttcttacg
cgctcacacacgtacgtaagaagaagaagagacgaggcagagaggatggacgaggcagtt
accacgccgcctacatttaagcgaagtttcttagatcggatctactgcgtggagttctcg
ccgtacgagtggtctcagcatttaatctgcatcgctctcaccaaagagattgtcgtcggt
accgtcagatttcaggatgaagacgatgcagtggaagatatagcatacaatcccatcaga
acgtttcatcatgatgccaggccccacgcgatcgcctggagtccagagacctccctgagt
atcgtccctaagatcctcacgttctgcgtcgctggatcagatttcaaaataagattgtac
aatagcaatttaaatgacatcaacatgtatgagattttagaaggtcacaaagattataca
aatgcaatctcctatgagccagaaggagaactgttggcatcagtctctgacgatcatacg
tgtaagctgtgggcagttaaagaaaaccaaaagtgtgtgtctacattttttctgacatca
cctggtatcagtgtctgttggcatagtgaagagtccggcaagctcttggtagctgaaaag
aacggtttgatacgtatgtacaatgtcagaagtcaacaagcaattatgtctcttgactct
ggagctgttcccttgactgcagcagactggggacctaatcctttgaaagtcgtatcgatg
gctgctggagaattgctactttgggatgtatccagaccaagtcgtccactcgatgagcga
acgcttcatgtggaaggtggtcttacggtaaagatctcgcacgcgaatgaaaatctggta
tcaagtataggatggccagataacttactgaaagtttttaatttaagatcaaaagtagtt
gtattatgtggaaaagtgaagttaattggcggtatgacatggcattataaattaccctat
gtttgcgcgggaagtgacagagacttatgtttctggagaataaatataaattaa
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