Solenopsis invicta (red fire ant): 105198651
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Entry
105198651 CDS
T03916
Name
(RefSeq) integrin alpha-PS4
KO
K06584
integrin alpha 8
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04512
ECM-receptor interaction
soc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105198651
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105198651
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
soc04515
]
105198651
Cell adhesion molecules [BR:
soc04515
]
Integrins
Integrin alpha subunits
105198651
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_2
FG-GAP_3
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_alpha
Collectrin
Motif
Other DBs
NCBI-GeneID:
105198651
NCBI-ProteinID:
XP_011163743
LinkDB
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Position
1:32342209..32348085
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AA seq
1062 aa
AA seq
DB search
MLWAHFLVQILIFVLAILQHNPSAYNINSLNARIFRNPVHLSTGRGSYFGFSVAFYVGAD
KSLLLVGAPRANSSELPFVTEPGTVFKCAMNGVCKEWVMDKTGNGPHPRERLINQIKDNA
WIGATIAVQNNTKPKVMVCGPRWINNIINDNKPNWYMNGICYATLASNANAFERQAEEHL
IPLSNSEDQITSKNNINIYNYGVGQVGFSLHMNSRYSVNVAIGSPGIYNWKGDAILTVSS
MVGSFSRTVIPSLAREQRVHSYNYFGYAITAGTYFNEQDVWYASSAPQGANMYGKVLIFS
FPPKTNQRMFIKTIKYGQHYGEYFGAALTSCDVNNDHRQELIVGAPQWSRDMDEGRVYIF
AARHNTDLEELQTIEGEIIGGRFGSTVMCLGDIDYDGYGDIAVGAPYEEESGGAVYIFNG
NRDGVSRKYSQRLVGSRFSPTMRGFGISISEPRDVNRDNHSDIAVGAYLSDEVVLLTSAP
VVAINVTLTYLQKIKLLRNTTSFKIDIWMSYDGTYVPDHLRVTVVLKIDPLHGRATYRAQ
KSDDELQIYRLRYTLFKATITSNLLEIHLTKNIQNIIDPLEISVSMQLEDDLHAKNENSL
CASCVVINKLRSKTEDLIKLPFAVDCGEDNVCVSDLGVALSTDSTSDNRYIIGSTSVITL
RVDAYNHEEPAYQTRVRIFTEVLALASIPPECTEDSRTSGTLDVICDIGNPLRTNKTLML
QLDMSMVRYDVREVEIQANITTQSDEANWNDNSYTITVYFDADIDIAIAGKAQENLYSYL
REDEKKALNDIRFQHFYEVQKFGASPIEEVMLTVKIPTYLRRYDAEDVMIVSINDTVGRM
DGYQFYCSDSNQTELISMASNKIASTDDVIIMNSSIVTSNNTHAKFSIEEDTPMNLPSEN
RTLYINCTNNAIECVKITCRLGPFLSSLSVAKFLVTLDLQLSSFPADVLKHKDIIFYVTE
GSVIVIQPDNIAQRKDHKPDTTLVATTFLGSPIAQQISVWIIALSVILGVALLILVVLGL
IKVGFFNRKKKLELEALLKAETDKKYNVVLETTSSTEVLDHD
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgctttgggcacattttcttgtacaaattttaattttcgttctggcaattctacagcac
aatccgtcggcgtacaatattaattcactcaacgcccggatatttaggaatcctgtgcac
ttgtcgactggacgtggaagttactttggattctcggtagctttctacgtgggtgcggac
aaatccttattactcgtcggagctccgcgagcgaactccagcgaactgccattcgtcaca
gagccgggaacggtcttcaagtgtgcgatgaatggtgtatgcaaagagtgggtgatggat
aagaccggaaatggtccgcatcctcgtgagagattaattaatcaaataaaggataacgct
tggatcggtgctaccattgccgtgcagaataatacgaagcctaaagttatggtttgcgga
ccacgatggataaataatattataaatgacaacaagccgaattggtacatgaacggaatt
tgctacgcgacgctggctagcaacgccaatgcttttgagagacaagcggaggagcacctc
ataccactttcgaactctgaagatcaaatcacgtccaagaataacataaacatttataat
tacggggtaggacaagtcggcttctccttgcacatgaattcgcgatatagcgtgaatgtc
gcgattggtagtccaggcatatacaactggaaaggcgatgcgatattaactgtttcctcg
atggtcggttcattctcacgcacggtaattccctcgcttgctagagaacaacgggttcat
agttacaattacttcggatacgctatcacagcgggtacttatttcaatgagcaagacgtc
tggtatgcgtccagtgcaccacaaggtgctaacatgtatggaaaagtcctcatattttcc
tttccacctaaaactaatcagcgtatgtttatcaaaacgattaagtacggtcaacattac
ggtgaatacttcggtgctgcactaacgtcatgtgacgtcaacaatgaccatagacaggag
ctgattgtcggtgcaccgcaatggtccagagacatggacgagggtcgcgtctatattttt
gcagcgcgacacaacaccgatttggaggaactgcagacgatcgaaggtgagattatcgga
ggcagattcggatccaccgtgatgtgtctgggtgacatcgattacgacggctacggtgat
atcgccgtgggtgcaccctacgaggaagaaagcggcggggcggtgtacatattcaacggg
aatagagacggcgtttctcggaaatatagtcagaggctggtcggctcgcgattttcgccg
acgatgcgagggttcggtatctcaatctcggaaccccgagatgtgaatcgcgacaatcat
tccgatatcgctgtaggtgcgtatctgtccgacgaggtggtcctgctgacatccgcaccg
gtcgtcgcgataaacgtgacattgacgtacctgcaaaagatcaaattgctgagaaacaca
acgtccttcaagatcgacatctggatgtcttacgacggcacatacgtacccgatcatctg
cgagttaccgtagtcctgaagatcgatccattacacggcagggccacgtatcgagcgcag
aaaagtgacgacgaactacagatttacagattgcgttacacgttatttaaagctacgatc
acgagtaatctgcttgaaatacatctaacgaaaaatattcaaaatataatagatccgctt
gagatatcggtgtcaatgcaactagaagatgatcttcacgcgaaaaacgaaaactcgtta
tgcgcatcatgcgtcgtgataaacaagctccgctcgaagaccgaggacctcataaagctg
ccattcgccgtggactgtggcgaggacaacgtatgcgtgtccgatctcggtgtagcatta
tccactgactcaacttcggacaacaggtatatcatcggctcgacgtcggtaattactctg
cgcgtcgacgcttataatcacgaagaaccggcataccagaccagagtgcgtatcttcacc
gaggtcttagcgttagcgagtatcccgcccgagtgtacggaagactctcgcacgagcggc
acgctggatgtgatctgtgacatcggtaatcctcttagaacgaataaaacattaatgctg
caactggacatgagtatggtgaggtatgatgttagggaggtggaaatacaagcgaatatc
actactcaaagcgacgaagcgaattggaatgacaatagttacaccattaccgtgtacttt
gacgcggacatcgacatagcgatcgccgggaaagcacaggagaatttatactcgtaccta
cgcgaggacgagaagaaagcattaaacgatattaggtttcaacatttttacgaggtgcag
aaattcggcgctagtcctatcgaagaggtaatgttgaccgtgaaaattccaacgtacctt
cgccgatacgatgccgaggacgtaatgatcgtcagtatcaacgataccgttggcagaatg
gatggatatcaattttactgcagcgactcgaatcaaactgaattaatctctatggcgtct
aacaagatcgcatccacggatgatgtaatcataatgaactcgtcgatcgtcacgagcaat
aacacgcacgcgaaattcagcatagaggaagacacgccgatgaacctgccatctgaaaac
agaacgctctatattaattgcacgaataatgcaattgaatgtgtaaaaatcacttgtaga
ttgggcccattcttaagttctctgtctgtcgcgaaatttttggtgacgttggatctacaa
ttatcgagttttcctgctgatgtgctgaagcacaaagatatcatattttatgtaactgaa
ggtagcgttatcgtaatacaacctgacaatattgctcaaagaaaggatcacaaaccggac
accactttggttgcaacaacatttttgggttcgccgatagctcaacaaatatcggtgtgg
ataatagcgctgtcggtgattctcggagttgcactgttgatattggtggtactaggttta
ataaaggtcggtttcttcaacagaaaaaagaagttggaactcgaggcgttgctgaaagcc
gaaactgataaaaagtataatgtggtactggaaacaacatcctcgacagaagttcttgat
cacgactga
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