Solenopsis invicta (red fire ant): 105198752
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Entry
105198752 CDS
T03916
Name
(RefSeq) gamma-aminobutyric acid receptor alpha-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04080
Neuroactive ligand-receptor interaction
soc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105198752
04082 Neuroactive ligand signaling
105198752
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
soc04040
]
105198752
Ion channels [BR:
soc04040
]
Ligand-gated channels
GABA-A
105198752
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF4408
Motif
Other DBs
NCBI-GeneID:
105198752
NCBI-ProteinID:
XP_025992306
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Position
2:631556..651918
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AA seq
534 aa
AA seq
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MKLMSKFEHEARIYTNLRSIMKPKVLLILANFITSAFFFTAAASARTYVKQQTQSNNHSN
ISNLLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDRR
LAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQNGRVLYSSRLT
IKAGCPMNLEDFPMDTQKCPLQFGSFGYTTRDVIYKWNSARQVAISEDMKLSQFDLVANP
TANHSTAPGFSHAEYSILLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADR
VSLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFIFATIIQFAVVHYFTKYGS
GECYFSSDLSDTESSSEEENVTKRLMKNQPARRKSSASSSTRGRGNRNLTINDDSMIEVI
PLSAISIPDRDPTMTRHWQISCVTCSPPPRQVVPVPPMPLPLPPSAPPLPSSKRTPLSTS
RKRRRRTPRYNSVSKIDRVSRVMFPLFFLTINLFYWYAYLSRSERIHYYNSNTT
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatgagcaaattcgaacacgaagcgaggatctatacaaacttacgaagcatt
atgaagccgaaagttctgctcatccttgccaacttcattacttctgccttttttttcaca
gcggccgcgagtgcaagaacgtacgtcaaacagcagacgcaaagcaataatcacagcaac
attagtaacctattagataatttacttcgaggctacgacaatagtgttagaccggatttt
ggcgggccgccggcgactgtcgaggtcgatattatggtacgcagcatgggacccatttcc
gaggtggatatgacgtactcaatggattgttacttccggcagtcgtgggtagacagacgt
ttagcatttcaaggtggtaaagaaacactcgctctaagtatttctatgttggcgcggatc
tggaagcccgacacgtacttttacaacggcaaacacagttacttgcacacgatcaccagc
ccgaacaaatttgtcagactttatcagaatggcagagttctttacagttccagacttacg
atcaaagcaggatgtccgatgaatctcgaagatttcccaatggatacacagaaatgtccg
ttgcaatttggcagctttggctacacgacccgcgacgtaatctacaaatggaacagcgca
aggcaagtcgctatatcggaggacatgaagctgtcgcaatttgatctggtagctaatccc
accgcaaatcattcgactgcaccaggcttctcgcatgcggagtactcgatattgctggta
tactttcacttacaaaggcacatgggtaatttcttgatacaagtatacggtccttgcgtc
ctgctggtagtcctatcttgggtctcattctggttaaacagagaagctactgccgatcga
gtatcgctaggcataacgactgtattaacaatgacgttcttaggacttgaagcaagaacc
gatctgcctaaagttccttatcccactgctttggatttcttcgtatttctgtcgttcgcg
tttatctttgccactataatacaattcgcagtggtgcattatttcaccaaatacggatca
ggagagtgttactttagctccgatctaagcgacactgaaagttcgagtgaagaggaaaat
gtaactaaaaggctaatgaaaaatcaaccggctcgtcggaagagttccgcaagttctagc
acgcgaggacgtggcaatcgtaacttgacgataaatgatgacagtatgatcgaagtgata
ccattgtcagcgatctcgatacccgatagggatccaacgatgaccaggcattggcagata
tcttgtgtgacttgcagcccaccaccgagacaagtggtgccggtgccgccgatgccgctg
ccactgccgccatcggcaccaccgctgccgtcctccaagcgtacaccgttgtccacatcc
agaaaacgacgtcgacgaacacctagatacaattcggtatcaaagattgatcgcgtcagt
cgtgtaatgtttcccctctttttcctgaccattaatctcttctattggtacgcttatctc
tcacgtagcgagcgaattcactattacaattccaacacgacgtaa
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