Solenopsis invicta (red fire ant): 105199011
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Entry
105199011 CDS
T03916
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soc03041
]
105199011
Spliceosome [BR:
soc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105199011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
CBM-like_CFAP184
DUF5558
Motif
Other DBs
NCBI-GeneID:
105199011
NCBI-ProteinID:
XP_011164205
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All DBs
Position
2:4555595..4564934
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AA seq
987 aa
AA seq
DB search
MAQNNYFGFTHGGTQYGATSAAAYQTGQAGYAVTPAATAATYTQRPAAAAATGYETYQAA
AAAAATGTTYAAANPGTVAQTYDYGYGRAAPAATYDATKTYYQQPAAAAATYTTTETHYQ
AAKPAYSTTSAYTGTARQATTTGQAKTYQASSTAYQQSNPTQSATYSSGYTAPATPAATP
STATNKTASTTYSGYDAALYSAATMFVAQQQNANSNSTNQKTGGWQGYGRKGFGAGGGGM
KAMRPKQPPKPQQLHYCDVCKISCAGPQTYREHLEGQKHKKKEASLKVPQQPPARGAGNS
LRCELCDVTCTGNDAYAAHIRGAKHQKVVKLHTKLGKPIPSADPTVLNPKPAAAAKAAAT
KKPVTATPKINFVASGNLGTVNQNQTAEVKQEEPAAEEAVEEAAVDEKDIQPVGQEYIEE
NKSEDGKIISFNCKLCECRFNDPNAKDMHMKGRRHRFAYKKKVNPDLVVDMKPSLKQRKM
LEEKLRRQQMRDEYIRRREEINQLGPIGPMMDEEIMYWEERRRYEEECEYYEWYRRYGRG
PGAPPMPRPFQGPPPMMMFPGPQRRPDSSDDKHVLAHHTTIYPKEQELLAVQKIVSHTEK
ALKFVSDALAEAGKKNAPANANATSATAPAGIPQANADAIKKDEADKKKAITPQKEDGSD
GNLFSFQKEKEDSRILRGVMRVGNLAKGLLLSGDNHVCLVVLCAEKPTRTLLNKVAEILP
GELKNVAPEETYNVGKHPESAALTVSGGTVTVSVTLTSPLMRETPKSTAAADNAGQQQQE
AAQLQTAPAAPTVTKPDPPDVLPKAKCLEALAALRHAKWFQARATSLQSCVMVIRIMRDL
CNRVPTWGPLNAWALELLTEKVISTAGGPLSPGEALRRLLECVAGGILLPGSPGLSDPCE
KEAVDAIGNMTSQQREDITASAQHALRLVAFRQIHKVLGMEQLPPPKFKGRFARKRRRDN
SNGEGTDSEASKKDKKAEEIKMETDSK
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaacaactatttcggctttacccacggcgggacgcaatatggggcgaccagc
gccgccgcgtaccaaaccggccaggcaggatacgctgtgactccagcggcgaccgctgcc
acgtacacccagcgacctgcggccgccgccgccaccggctacgagacctaccaggcagcc
gccgccgcagccgcgaccgggacgacttatgcagctgctaatcccggtacagtagctcag
acttacgattacgggtacggacgagctgcaccagcagctacgtacgacgcaactaaaaca
tattaccagcaaccagcagctgctgcagcaacttacaccactactgaaacacattaccaa
gcggcgaagcctgcttatagtacgaccagtgcctatactggcactgctagacaagccact
accactggacaagctaagacctatcaagcgtctagcacggcttatcagcaatcaaatcct
acgcaaagcgctacttattcatcagggtacactgcaccagctacgcccgccgctactccg
tcaaccgcgacaaataaaacggcgagtacaacgtattccggctacgacgcagcgctatat
agcgctgcgactatgtttgtagcccaacagcaaaatgcaaacagcaattccactaaccag
aagactggaggttggcagggctacggacggaaaggattcggagctggcggcggagggatg
aaggcaatgcggcccaagcagcctcctaaacctcagcaactacactattgcgatgtttgt
aagatcagctgcgccggaccacagacctatcgtgagcatctggagggtcagaaacacaag
aagaaggaggcttccctgaaggtaccgcaacagcctccggcgcgtggagcaggcaacagt
cttcgctgtgaactttgcgacgtaacttgtactggaaacgatgcctatgccgctcacatt
agaggtgctaagcatcaaaaagtagtcaagttacacactaagcttggaaaacctatacca
agcgcggatcccactgttctgaatccgaaacctgcggctgctgcaaaagctgcagctacc
aagaaaccggtgacagcaacgcctaaaatcaattttgtcgcctctggaaacttgggtacc
gtgaatcaaaatcaaaccgcggaagttaagcaggaagaaccagctgccgaagaagctgtg
gaagaggctgcggtcgatgagaaggatattcagccagttggtcaagaatatatcgaagaa
aataaatccgaggatggaaagatcataagtttcaattgtaaactgtgcgagtgtcggttc
aacgatcccaatgccaaagacatgcatatgaagggtcgtcgtcacagatttgcctataag
aagaaggtcaatccagatttggtcgttgacatgaaaccaagccttaagcagcgcaagatg
ctggaagagaaactacgtagacaacaaatgcgcgatgaatatatacgtcgcagggaggaa
attaatcaattgggacctataggaccgatgatggacgaggagataatgtattgggaagaa
cgacgccgctacgaggaggaatgtgaatattatgaatggtatcgacgttacggacgtggg
ccaggcgccccaccgatgccacgtccgttccaaggtccaccgcccatgatgatgttccca
ggtccccaaagacgaccagattcgtcagatgacaaacatgtactggcacaccatacaact
atttatcctaaagaacaagaactattggcagttcagaaaatagtttctcacactgagaaa
gcattgaaatttgtatcggatgctttagctgaagctggtaaaaaaaatgctcctgctaat
gccaatgctacttcagcaacggcaccagctggtatcccgcaggcgaacgccgacgcaatt
aaaaaagatgaagctgacaagaagaaggcaatcacaccacagaaggaagacggaagtgat
gggaatctattttcgtttcagaaggaaaaagaagattctagaattcttcgtggcgttatg
cgtgttggaaacttggccaaagggctgttgctatctggagataatcacgtttgtcttgtt
gttttgtgcgcagaaaaacctaccaggacgttgctcaataaagttgcggagattttgccc
ggtgaattaaagaatgtagctcctgaagaaacatacaatgtaggaaaacatccggaatcc
gcagctttgacagtctcagggggtacggtcactgtcagcgtgacgctcaccagtcccctg
atgcgtgaaacacccaagtcaacagctgcagcagataatgctggacagcagcagcaggaa
gctgctcaactgcaaacagcgcccgcggcccccaccgtgacgaaaccagacccaccagac
gtccttcccaaggctaagtgtttggaggctttagctgcactcaggcatgccaagtggttt
caggctagagctacgtcactgcagagctgcgttatggttatccgtataatgcgtgacttg
tgcaatcgtgtgccaacatggggtccattaaatgcttgggcattggaactattgactgag
aaagttattagcactgcaggaggtcctcttagtcccggtgaagccttgaggagacttttg
gaatgcgtagctggaggaatattactaccgggtagtccaggattatccgatccatgcgag
aaagaggcagttgatgctataggaaacatgacatctcaacaaagagaagatattaccgcg
tccgcgcagcacgcgctacgattagtggcgttccgccagattcacaaggtcctaggtatg
gagcaattgccgccgccaaaattcaagggacgtttcgcccgaaagcgaagacgtgacaac
agcaacggagagggcacggatagcgaggcttcgaagaaggataaaaaagcggaggagatc
aaaatggaaacagattcgaagtag
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