Solenopsis invicta (red fire ant): 105199141
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Entry
105199141 CDS
T03916
Name
(RefSeq) exosome complex component RRP43 isoform X2
KO
K12586
exosome complex component RRP43
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105199141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105199141
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105199141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105199141
NCBI-ProteinID:
XP_025988819
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Position
2:complement(4868986..4872154)
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AA seq
283 aa
AA seq
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MDLQYKTIHPVKYLQDHLEQNVRMDGRKFLSFRPISINVSSIVQADSSAIFKLGDTTAVC
GIKAELATPKADTPDHGYIVPNVELSPLCSSKFRPGPPSEQAQVLSKLIDIILSNSVALD
LKDLCICRNKLVWVLYCDILCLNYNGSVIDACTGAMFAALKTLVLPEVNYNKETAVIVVN
PKNKKTFTVRTLPVSTSFAIFEKQLLVADPTDDEEDLSSGKFSIVFDDEEEICYIHKPGG
IPISQNLLSKGLELAKARAKAVRSVINAAISTMNVNDGMETNT
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggatttacaatacaaaacgattcatcctgtgaaatatttgcaagatcatcttgagcaa
aacgttcggatggatggcagaaaattcttgtcctttcggccaataagcataaatgtttcg
tcgatcgttcaggcagacagttcagcaatattcaaattgggtgacacaactgcagtttgc
ggtattaaagctgaattagcgacaccgaaagcggatactccagatcatggctacatagta
ccaaatgtggaattgtctcctctgtgttcctcaaagttccgtccaggtccaccaagcgaa
caggcgcaggtgctctctaaattgatagatatcattctgagtaattcagtagcactcgac
ttgaaagatctttgcatctgtagaaataaattagtatgggtcttgtactgtgatatcctg
tgcctaaattacaatggctcggttatagacgcttgcactggagcgatgtttgcggctctc
aaaacgttggtcctacctgaggtaaattacaacaaagaaacagcagtgattgttgtaaat
ccgaaaaacaaaaagacgttcactgtgagaacgttgccagtttcaacgtcgtttgcaata
tttgaaaaacaattgttagtagccgatcctacggatgacgaggaggatttgtcatcggga
aaattttctatcgtatttgatgatgaagaagaaatttgctatatacataaacccggtgga
attccaatctctcaaaatttactttccaaaggactggaattggcaaaagcgagagcaaag
gcggtcagatcggtgataaacgctgctatttcgacaatgaatgtaaatgatggaatggaa
acaaatacttga
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